| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489579
Identifier: 84489579
GI number: 84489579
Start: 903003
End: 904853
Strand: Direct
Name: 84489579
Synonym: Msp_0775
Alternate gene names: NA
Gene position: 903003-904853 (Clockwise)
Preceding gene: 84489578
Following gene: 84489580
Centisome position: 51.09
GC content: 25.61
Gene sequence:
>1851_bases TTGCTGTTTCTCATAATAGTCTTTGTTTCAATAATGTCTGTAAGTGCAGCAGATGCTGGAAATTCTTCCAATAGTAATTT CCATAAGATCCAAATCGATTCAAATACTCAAAACACTATTGATAACAATACAAATTATTATAAAAGCAACGATAATCTTA ATAAAAATGATAATAATAATTTAAAAAATCAATATACAAAACAGGAAAAAAATGAAAATAACACATATACTAAAAATAAT AATTTAGAAGATAAAGATGTTTATAACACATTGAATAATGTGGAAAATTATGATATAAATAGTAACTTAAATAACTCTGA GACAATAACCAACATGGTTTCAAATTCTTCTAATAAAGATAATATCTCAATAGATCTTCCTAATTATTCTGCATATGCTG GTAAAGTTATAATTATTAATGCAACAATAAAAACTAAAAATGGTACTCCACTTAACTTAGCTAAAGCTGCTTTCAAAGTC AATGGAAATACAAAAGCACATTTAAATGTAACTAATGGTAAATTAATCTATGCTTTTAAAATACCACAATGGAGTGCAAA AAAATATAATCTAACATTAGTAGTTGGTGAAACAAAAACTACCAATTCTTTAAGTAAAAATAGTACCTTAACATTATATA AGTTAAATACAACAATAAATACTCCTTACTTAACTTTTTCACAAAAAGATAAAGTAAGTTATGTTAATGCAACTATAAAA GATCAATTGAATAGAACTGTTTACACAGGTAATACATCTATTAAAATTAATGGAATAACTATAGGTCATTATAATACAAG TAATGGAATAATTAACTTTAATTTTACACAGACAAACAAATTAGGAACTCAAAATCTAACTATAATCTATGGAGAAAATA CATTTTTCAATTCTGCAATATCACAAACGAAAATTCGTATTATAAATACAACAATACACACATATACATATAGTCAAATA TTAGAAGCAGCAAATAGAGTTAAAAATTTTAAAGATAAAAATAAACGATTACCAACATGGGTTGTAATAAATAACAATGA TGTGACAATGGTTGATTTTCTATATTTAATGTGCCAATCCTTACATTCCAATGATTCATTATCAGAAGGAAACTTTGGAA GACCTTCTGTAGTTAAAGAAAATATAATCACTGGAAATATATATAAAGATGAATATTTAAATTTATCTAAAGAAATATCA CAATATATATCAAATTATGGAGTAGCACAAGGCTATATAAAAACATCCCTTGGAACATTAATGCTAAATTCGACAATTGA TGGATTCTCAAGAGCATTAGCTTATACATATAATCATAATGGTGTACTACCAAATTATATATCTTATAATCAAAGTACAT ATCCTATAACTACTAACACAACAGGTAACACAACAACCAATACAACAGATCCATATCTCTTACCAACATATAATTGTCAA TCAAATGATGCTGTAATAATTAGTTTATCTAAAAATTTAACTAAAGGTTGCACATCAGTACTTTCAAAAGCAACAAATAT TTTCAATTATGTTAGAGATTATATTAAGTATGATCAATATGAGAATACAAGATATGGTGCTGTAAAAACATTAAGTCGTA AATTAGGAAATTGTTGTGATCAAGCACATTTATTAGTAGCACTCTTAAGAGCAGCAAATATTAGAGCAGGTTATGCTCAT GCAGAATGTCAATTTAACTCAGGAATCAAAGGTCATGTATGGGCTAAAATATATTTAAACAATGAATGGGTTGATGCTGA TCCAACAAGTCGTTATAATTCTATAGGTAATACAAAAAGTAATACTATTATATCTTGGAGAATAAAATTAACTTCTGAAA TTTTATTCTAA
Upstream 100 bases:
>100_bases AATTATATTTAAATTGAAAATTTTCAAATTAACAACTTAAAATAATTCATTAATGTAAATCATGGGAGGAACAATTTTGA ATAATAAAAGATTATCATTA
Downstream 100 bases:
>100_bases AAAAAGTAATGAAAAAATAGGTGATGAAAATGATAAAAAAAATAATACCTCTTGTACTTATATTATTTATTATTGGAATT TTTTCAGCAGCTTATATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MLFLIIVFVSIMSVSAADAGNSSNSNFHKIQIDSNTQNTIDNNTNYYKSNDNLNKNDNNNLKNQYTKQEKNENNTYTKNN NLEDKDVYNTLNNVENYDINSNLNNSETITNMVSNSSNKDNISIDLPNYSAYAGKVIIINATIKTKNGTPLNLAKAAFKV NGNTKAHLNVTNGKLIYAFKIPQWSAKKYNLTLVVGETKTTNSLSKNSTLTLYKLNTTINTPYLTFSQKDKVSYVNATIK DQLNRTVYTGNTSIKINGITIGHYNTSNGIINFNFTQTNKLGTQNLTIIYGENTFFNSAISQTKIRIINTTIHTYTYSQI LEAANRVKNFKDKNKRLPTWVVINNNDVTMVDFLYLMCQSLHSNDSLSEGNFGRPSVVKENIITGNIYKDEYLNLSKEIS QYISNYGVAQGYIKTSLGTLMLNSTIDGFSRALAYTYNHNGVLPNYISYNQSTYPITTNTTGNTTTNTTDPYLLPTYNCQ SNDAVIISLSKNLTKGCTSVLSKATNIFNYVRDYIKYDQYENTRYGAVKTLSRKLGNCCDQAHLLVALLRAANIRAGYAH AECQFNSGIKGHVWAKIYLNNEWVDADPTSRYNSIGNTKSNTIISWRIKLTSEILF
Sequences:
>Translated_616_residues MLFLIIVFVSIMSVSAADAGNSSNSNFHKIQIDSNTQNTIDNNTNYYKSNDNLNKNDNNNLKNQYTKQEKNENNTYTKNN NLEDKDVYNTLNNVENYDINSNLNNSETITNMVSNSSNKDNISIDLPNYSAYAGKVIIINATIKTKNGTPLNLAKAAFKV NGNTKAHLNVTNGKLIYAFKIPQWSAKKYNLTLVVGETKTTNSLSKNSTLTLYKLNTTINTPYLTFSQKDKVSYVNATIK DQLNRTVYTGNTSIKINGITIGHYNTSNGIINFNFTQTNKLGTQNLTIIYGENTFFNSAISQTKIRIINTTIHTYTYSQI LEAANRVKNFKDKNKRLPTWVVINNNDVTMVDFLYLMCQSLHSNDSLSEGNFGRPSVVKENIITGNIYKDEYLNLSKEIS QYISNYGVAQGYIKTSLGTLMLNSTIDGFSRALAYTYNHNGVLPNYISYNQSTYPITTNTTGNTTTNTTDPYLLPTYNCQ SNDAVIISLSKNLTKGCTSVLSKATNIFNYVRDYIKYDQYENTRYGAVKTLSRKLGNCCDQAHLLVALLRAANIRAGYAH AECQFNSGIKGHVWAKIYLNNEWVDADPTSRYNSIGNTKSNTIISWRIKLTSEILF >Mature_616_residues MLFLIIVFVSIMSVSAADAGNSSNSNFHKIQIDSNTQNTIDNNTNYYKSNDNLNKNDNNNLKNQYTKQEKNENNTYTKNN NLEDKDVYNTLNNVENYDINSNLNNSETITNMVSNSSNKDNISIDLPNYSAYAGKVIIINATIKTKNGTPLNLAKAAFKV NGNTKAHLNVTNGKLIYAFKIPQWSAKKYNLTLVVGETKTTNSLSKNSTLTLYKLNTTINTPYLTFSQKDKVSYVNATIK DQLNRTVYTGNTSIKINGITIGHYNTSNGIINFNFTQTNKLGTQNLTIIYGENTFFNSAISQTKIRIINTTIHTYTYSQI LEAANRVKNFKDKNKRLPTWVVINNNDVTMVDFLYLMCQSLHSNDSLSEGNFGRPSVVKENIITGNIYKDEYLNLSKEIS QYISNYGVAQGYIKTSLGTLMLNSTIDGFSRALAYTYNHNGVLPNYISYNQSTYPITTNTTGNTTTNTTDPYLLPTYNCQ SNDAVIISLSKNLTKGCTSVLSKATNIFNYVRDYIKYDQYENTRYGAVKTLSRKLGNCCDQAHLLVALLRAANIRAGYAH AECQFNSGIKGHVWAKIYLNNEWVDADPTSRYNSIGNTKSNTIISWRIKLTSEILF
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69199; Mature: 69199
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLIIVFVSIMSVSAADAGNSSNSNFHKIQIDSNTQNTIDNNTNYYKSNDNLNKNDNNN CEEHEEHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCC LKNQYTKQEKNENNTYTKNNNLEDKDVYNTLNNVENYDINSNLNNSETITNMVSNSSNKD HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCC NISIDLPNYSAYAGKVIIINATIKTKNGTPLNLAKAAFKVNGNTKAHLNVTNGKLIYAFK EEEEECCCCCHHCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEE IPQWSAKKYNLTLVVGETKTTNSLSKNSTLTLYKLNTTINTPYLTFSQKDKVSYVNATIK CCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECEECCCEEEECCCCCEEEEEEHHH DQLNRTVYTGNTSIKINGITIGHYNTSNGIINFNFTQTNKLGTQNLTIIYGENTFFNSAI HCCCCEEEECCCEEEEEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCEECHHH SQTKIRIINTTIHTYTYSQILEAANRVKNFKDKNKRLPTWVVINNNDVTMVDFLYLMCQS CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHH LHSNDSLSEGNFGRPSVVKENIITGNIYKDEYLNLSKEISQYISNYGVAQGYIKTSLGTL HCCCCCCCCCCCCCCCHHHCCCEECCEEHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHE MLNSTIDGFSRALAYTYNHNGVLPNYISYNQSTYPITTNTTGNTTTNTTDPYLLPTYNCQ EEECCHHHHHEEEEEEECCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCC SNDAVIISLSKNLTKGCTSVLSKATNIFNYVRDYIKYDQYENTRYGAVKTLSRKLGNCCD CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH QAHLLVALLRAANIRAGYAHAECQFNSGIKGHVWAKIYLNNEWVDADPTSRYNSIGNTKS HHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEEECCEEECCCCCHHHHCCCCCCC NTIISWRIKLTSEILF CCEEEEEEEEEEECCC >Mature Secondary Structure MLFLIIVFVSIMSVSAADAGNSSNSNFHKIQIDSNTQNTIDNNTNYYKSNDNLNKNDNNN CEEHEEHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCC LKNQYTKQEKNENNTYTKNNNLEDKDVYNTLNNVENYDINSNLNNSETITNMVSNSSNKD HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCC NISIDLPNYSAYAGKVIIINATIKTKNGTPLNLAKAAFKVNGNTKAHLNVTNGKLIYAFK EEEEECCCCCHHCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEE IPQWSAKKYNLTLVVGETKTTNSLSKNSTLTLYKLNTTINTPYLTFSQKDKVSYVNATIK CCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECEECCCEEEECCCCCEEEEEEHHH DQLNRTVYTGNTSIKINGITIGHYNTSNGIINFNFTQTNKLGTQNLTIIYGENTFFNSAI HCCCCEEEECCCEEEEEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCEECHHH SQTKIRIINTTIHTYTYSQILEAANRVKNFKDKNKRLPTWVVINNNDVTMVDFLYLMCQS CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHH LHSNDSLSEGNFGRPSVVKENIITGNIYKDEYLNLSKEISQYISNYGVAQGYIKTSLGTL HCCCCCCCCCCCCCCCHHHCCCEECCEEHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHE MLNSTIDGFSRALAYTYNHNGVLPNYISYNQSTYPITTNTTGNTTTNTTDPYLLPTYNCQ EEECCHHHHHEEEEEEECCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCC SNDAVIISLSKNLTKGCTSVLSKATNIFNYVRDYIKYDQYENTRYGAVKTLSRKLGNCCD CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH QAHLLVALLRAANIRAGYAHAECQFNSGIKGHVWAKIYLNNEWVDADPTSRYNSIGNTKS HHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEEECCEEECCCCCHHHHCCCCCCC NTIISWRIKLTSEILF CCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA