Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489579

Identifier: 84489579

GI number: 84489579

Start: 903003

End: 904853

Strand: Direct

Name: 84489579

Synonym: Msp_0775

Alternate gene names: NA

Gene position: 903003-904853 (Clockwise)

Preceding gene: 84489578

Following gene: 84489580

Centisome position: 51.09

GC content: 25.61

Gene sequence:

>1851_bases
TTGCTGTTTCTCATAATAGTCTTTGTTTCAATAATGTCTGTAAGTGCAGCAGATGCTGGAAATTCTTCCAATAGTAATTT
CCATAAGATCCAAATCGATTCAAATACTCAAAACACTATTGATAACAATACAAATTATTATAAAAGCAACGATAATCTTA
ATAAAAATGATAATAATAATTTAAAAAATCAATATACAAAACAGGAAAAAAATGAAAATAACACATATACTAAAAATAAT
AATTTAGAAGATAAAGATGTTTATAACACATTGAATAATGTGGAAAATTATGATATAAATAGTAACTTAAATAACTCTGA
GACAATAACCAACATGGTTTCAAATTCTTCTAATAAAGATAATATCTCAATAGATCTTCCTAATTATTCTGCATATGCTG
GTAAAGTTATAATTATTAATGCAACAATAAAAACTAAAAATGGTACTCCACTTAACTTAGCTAAAGCTGCTTTCAAAGTC
AATGGAAATACAAAAGCACATTTAAATGTAACTAATGGTAAATTAATCTATGCTTTTAAAATACCACAATGGAGTGCAAA
AAAATATAATCTAACATTAGTAGTTGGTGAAACAAAAACTACCAATTCTTTAAGTAAAAATAGTACCTTAACATTATATA
AGTTAAATACAACAATAAATACTCCTTACTTAACTTTTTCACAAAAAGATAAAGTAAGTTATGTTAATGCAACTATAAAA
GATCAATTGAATAGAACTGTTTACACAGGTAATACATCTATTAAAATTAATGGAATAACTATAGGTCATTATAATACAAG
TAATGGAATAATTAACTTTAATTTTACACAGACAAACAAATTAGGAACTCAAAATCTAACTATAATCTATGGAGAAAATA
CATTTTTCAATTCTGCAATATCACAAACGAAAATTCGTATTATAAATACAACAATACACACATATACATATAGTCAAATA
TTAGAAGCAGCAAATAGAGTTAAAAATTTTAAAGATAAAAATAAACGATTACCAACATGGGTTGTAATAAATAACAATGA
TGTGACAATGGTTGATTTTCTATATTTAATGTGCCAATCCTTACATTCCAATGATTCATTATCAGAAGGAAACTTTGGAA
GACCTTCTGTAGTTAAAGAAAATATAATCACTGGAAATATATATAAAGATGAATATTTAAATTTATCTAAAGAAATATCA
CAATATATATCAAATTATGGAGTAGCACAAGGCTATATAAAAACATCCCTTGGAACATTAATGCTAAATTCGACAATTGA
TGGATTCTCAAGAGCATTAGCTTATACATATAATCATAATGGTGTACTACCAAATTATATATCTTATAATCAAAGTACAT
ATCCTATAACTACTAACACAACAGGTAACACAACAACCAATACAACAGATCCATATCTCTTACCAACATATAATTGTCAA
TCAAATGATGCTGTAATAATTAGTTTATCTAAAAATTTAACTAAAGGTTGCACATCAGTACTTTCAAAAGCAACAAATAT
TTTCAATTATGTTAGAGATTATATTAAGTATGATCAATATGAGAATACAAGATATGGTGCTGTAAAAACATTAAGTCGTA
AATTAGGAAATTGTTGTGATCAAGCACATTTATTAGTAGCACTCTTAAGAGCAGCAAATATTAGAGCAGGTTATGCTCAT
GCAGAATGTCAATTTAACTCAGGAATCAAAGGTCATGTATGGGCTAAAATATATTTAAACAATGAATGGGTTGATGCTGA
TCCAACAAGTCGTTATAATTCTATAGGTAATACAAAAAGTAATACTATTATATCTTGGAGAATAAAATTAACTTCTGAAA
TTTTATTCTAA

Upstream 100 bases:

>100_bases
AATTATATTTAAATTGAAAATTTTCAAATTAACAACTTAAAATAATTCATTAATGTAAATCATGGGAGGAACAATTTTGA
ATAATAAAAGATTATCATTA

Downstream 100 bases:

>100_bases
AAAAAGTAATGAAAAAATAGGTGATGAAAATGATAAAAAAAATAATACCTCTTGTACTTATATTATTTATTATTGGAATT
TTTTCAGCAGCTTATATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MLFLIIVFVSIMSVSAADAGNSSNSNFHKIQIDSNTQNTIDNNTNYYKSNDNLNKNDNNNLKNQYTKQEKNENNTYTKNN
NLEDKDVYNTLNNVENYDINSNLNNSETITNMVSNSSNKDNISIDLPNYSAYAGKVIIINATIKTKNGTPLNLAKAAFKV
NGNTKAHLNVTNGKLIYAFKIPQWSAKKYNLTLVVGETKTTNSLSKNSTLTLYKLNTTINTPYLTFSQKDKVSYVNATIK
DQLNRTVYTGNTSIKINGITIGHYNTSNGIINFNFTQTNKLGTQNLTIIYGENTFFNSAISQTKIRIINTTIHTYTYSQI
LEAANRVKNFKDKNKRLPTWVVINNNDVTMVDFLYLMCQSLHSNDSLSEGNFGRPSVVKENIITGNIYKDEYLNLSKEIS
QYISNYGVAQGYIKTSLGTLMLNSTIDGFSRALAYTYNHNGVLPNYISYNQSTYPITTNTTGNTTTNTTDPYLLPTYNCQ
SNDAVIISLSKNLTKGCTSVLSKATNIFNYVRDYIKYDQYENTRYGAVKTLSRKLGNCCDQAHLLVALLRAANIRAGYAH
AECQFNSGIKGHVWAKIYLNNEWVDADPTSRYNSIGNTKSNTIISWRIKLTSEILF

Sequences:

>Translated_616_residues
MLFLIIVFVSIMSVSAADAGNSSNSNFHKIQIDSNTQNTIDNNTNYYKSNDNLNKNDNNNLKNQYTKQEKNENNTYTKNN
NLEDKDVYNTLNNVENYDINSNLNNSETITNMVSNSSNKDNISIDLPNYSAYAGKVIIINATIKTKNGTPLNLAKAAFKV
NGNTKAHLNVTNGKLIYAFKIPQWSAKKYNLTLVVGETKTTNSLSKNSTLTLYKLNTTINTPYLTFSQKDKVSYVNATIK
DQLNRTVYTGNTSIKINGITIGHYNTSNGIINFNFTQTNKLGTQNLTIIYGENTFFNSAISQTKIRIINTTIHTYTYSQI
LEAANRVKNFKDKNKRLPTWVVINNNDVTMVDFLYLMCQSLHSNDSLSEGNFGRPSVVKENIITGNIYKDEYLNLSKEIS
QYISNYGVAQGYIKTSLGTLMLNSTIDGFSRALAYTYNHNGVLPNYISYNQSTYPITTNTTGNTTTNTTDPYLLPTYNCQ
SNDAVIISLSKNLTKGCTSVLSKATNIFNYVRDYIKYDQYENTRYGAVKTLSRKLGNCCDQAHLLVALLRAANIRAGYAH
AECQFNSGIKGHVWAKIYLNNEWVDADPTSRYNSIGNTKSNTIISWRIKLTSEILF
>Mature_616_residues
MLFLIIVFVSIMSVSAADAGNSSNSNFHKIQIDSNTQNTIDNNTNYYKSNDNLNKNDNNNLKNQYTKQEKNENNTYTKNN
NLEDKDVYNTLNNVENYDINSNLNNSETITNMVSNSSNKDNISIDLPNYSAYAGKVIIINATIKTKNGTPLNLAKAAFKV
NGNTKAHLNVTNGKLIYAFKIPQWSAKKYNLTLVVGETKTTNSLSKNSTLTLYKLNTTINTPYLTFSQKDKVSYVNATIK
DQLNRTVYTGNTSIKINGITIGHYNTSNGIINFNFTQTNKLGTQNLTIIYGENTFFNSAISQTKIRIINTTIHTYTYSQI
LEAANRVKNFKDKNKRLPTWVVINNNDVTMVDFLYLMCQSLHSNDSLSEGNFGRPSVVKENIITGNIYKDEYLNLSKEIS
QYISNYGVAQGYIKTSLGTLMLNSTIDGFSRALAYTYNHNGVLPNYISYNQSTYPITTNTTGNTTTNTTDPYLLPTYNCQ
SNDAVIISLSKNLTKGCTSVLSKATNIFNYVRDYIKYDQYENTRYGAVKTLSRKLGNCCDQAHLLVALLRAANIRAGYAH
AECQFNSGIKGHVWAKIYLNNEWVDADPTSRYNSIGNTKSNTIISWRIKLTSEILF

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69199; Mature: 69199

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLIIVFVSIMSVSAADAGNSSNSNFHKIQIDSNTQNTIDNNTNYYKSNDNLNKNDNNN
CEEHEEHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCC
LKNQYTKQEKNENNTYTKNNNLEDKDVYNTLNNVENYDINSNLNNSETITNMVSNSSNKD
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCC
NISIDLPNYSAYAGKVIIINATIKTKNGTPLNLAKAAFKVNGNTKAHLNVTNGKLIYAFK
EEEEECCCCCHHCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEE
IPQWSAKKYNLTLVVGETKTTNSLSKNSTLTLYKLNTTINTPYLTFSQKDKVSYVNATIK
CCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECEECCCEEEECCCCCEEEEEEHHH
DQLNRTVYTGNTSIKINGITIGHYNTSNGIINFNFTQTNKLGTQNLTIIYGENTFFNSAI
HCCCCEEEECCCEEEEEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCEECHHH
SQTKIRIINTTIHTYTYSQILEAANRVKNFKDKNKRLPTWVVINNNDVTMVDFLYLMCQS
CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHH
LHSNDSLSEGNFGRPSVVKENIITGNIYKDEYLNLSKEISQYISNYGVAQGYIKTSLGTL
HCCCCCCCCCCCCCCCHHHCCCEECCEEHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHE
MLNSTIDGFSRALAYTYNHNGVLPNYISYNQSTYPITTNTTGNTTTNTTDPYLLPTYNCQ
EEECCHHHHHEEEEEEECCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCC
SNDAVIISLSKNLTKGCTSVLSKATNIFNYVRDYIKYDQYENTRYGAVKTLSRKLGNCCD
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
QAHLLVALLRAANIRAGYAHAECQFNSGIKGHVWAKIYLNNEWVDADPTSRYNSIGNTKS
HHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEEECCEEECCCCCHHHHCCCCCCC
NTIISWRIKLTSEILF
CCEEEEEEEEEEECCC
>Mature Secondary Structure
MLFLIIVFVSIMSVSAADAGNSSNSNFHKIQIDSNTQNTIDNNTNYYKSNDNLNKNDNNN
CEEHEEHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCC
LKNQYTKQEKNENNTYTKNNNLEDKDVYNTLNNVENYDINSNLNNSETITNMVSNSSNKD
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCC
NISIDLPNYSAYAGKVIIINATIKTKNGTPLNLAKAAFKVNGNTKAHLNVTNGKLIYAFK
EEEEECCCCCHHCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEE
IPQWSAKKYNLTLVVGETKTTNSLSKNSTLTLYKLNTTINTPYLTFSQKDKVSYVNATIK
CCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECEECCCEEEECCCCCEEEEEEHHH
DQLNRTVYTGNTSIKINGITIGHYNTSNGIINFNFTQTNKLGTQNLTIIYGENTFFNSAI
HCCCCEEEECCCEEEEEEEEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCEECHHH
SQTKIRIINTTIHTYTYSQILEAANRVKNFKDKNKRLPTWVVINNNDVTMVDFLYLMCQS
CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHH
LHSNDSLSEGNFGRPSVVKENIITGNIYKDEYLNLSKEISQYISNYGVAQGYIKTSLGTL
HCCCCCCCCCCCCCCCHHHCCCEECCEEHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHE
MLNSTIDGFSRALAYTYNHNGVLPNYISYNQSTYPITTNTTGNTTTNTTDPYLLPTYNCQ
EEECCHHHHHEEEEEEECCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCC
SNDAVIISLSKNLTKGCTSVLSKATNIFNYVRDYIKYDQYENTRYGAVKTLSRKLGNCCD
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
QAHLLVALLRAANIRAGYAHAECQFNSGIKGHVWAKIYLNNEWVDADPTSRYNSIGNTKS
HHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEEECCEEECCCCCHHHHCCCCCCC
NTIISWRIKLTSEILF
CCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA