| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is 84489561
Identifier: 84489561
GI number: 84489561
Start: 869250
End: 870470
Strand: Direct
Name: 84489561
Synonym: Msp_0757
Alternate gene names: NA
Gene position: 869250-870470 (Clockwise)
Preceding gene: 84489559
Following gene: 84489562
Centisome position: 49.18
GC content: 28.17
Gene sequence:
>1221_bases ATGATTAGAAGAGAATCCTATTTTAAGATTATTAATGAGTTTATAGATACTAGTTTTATTAAGATTTTCACAGGTATTCG TAGGTCTGGTAAAACAACTTTATTATTTAGTGTTGTTGATGAATTAAAGAATCGTGGAATAAGTGAGGATAATATTTTTT ATATTTCTTTTGAGTCCTTGAAGTATCAGAATATTACTGATTCAGTTAGTTTAAATGATTTAATTCTTGATTTGATTGGT AATGTTGAGGGTAAAGTTTATTTATTGTTTGATGAAATCCAGTTGGTTGATGGTTGGGAGAAGAGTATTAATGGTTTACA TGCTGATTTTAGTTGTGATATTTATATTACTGGTTCTAATTCCATGTTATTATCTGGTGAGTATGCTACATTATTGTCTG GTAGGTATATTCAGATTAATGTTTATCCATTTAGTTTTAAGGAAGTGCTTGAATATAAAGAAAAGGTGGATAATATTGAA ATAACAGACAATATTGAACGACAATTGTTTGATGAGTACTTGGAATTTGGTGGTATGCCCGGACTTTTAGAATTAAGTAG TAGTATAGCTAAACATGAAGCATTAAATGATATTTATGCCTCTATAGTTTATAATGATATTCTGGGTAGGTATCCTATCA GGAAAGCTGATTTATTTAAACGTTTTAGTAATTATATTATGAATACTATGGGTGAAACTTTTTCTTCAAAAAGTATTACA AGTTATCTTAAAAATGAGGTTGAAGAAACCAGTCGTAATACTATTCTTAATTTTACTAATTATCTTGAAAATGCTTTCTT CATTTCTAAGATTAGAAGGGAAGATTTGATTGGTAAAAAGATTCTTAAAACTCAACAAAAATATTATCTTATGGATCATG GATTTCATCATACATTAATTGAAAGTAACTGGCTTAAACAAACACATGTTCTGGAGAATATTGTCTACATTGAATTATTA AGACGGGGGTATGAAATAAAGATTGGTAAAATTTATGATAAAGAGATTGATTTCTTTTGTCGAAAAGATGGATTTGAATG TTATATCCAAGTATCATATACTGTAGCAGATCAGGATACATTGGAAAGAGAAATGATTCCGTTATTAAGGTTGAGAAATC ATTATGATAAATATATTTTCAGTATGGATGAACATGACATGTCCAGGGATGGAATTAAACATAGAAATATCCTAGAATTC TTGAAAGGTGATGAATTCTGA
Upstream 100 bases:
>100_bases AATTATTTTTTTAAAATATTCTTATATTCAACAAATTTATAAATATTATTTAACATAAATTATTATAGATTAAGTTACTT GCATTTTAGGATGTGATGTC
Downstream 100 bases:
>100_bases GAGAGGGGTATGATTAATTGGAACTGGATACACTAATATTTATTCAGATATATATTACAAGAATAGAATGAAAAAATCAC GAAAAAGTTATATGAAAAAT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MIRRESYFKIINEFIDTSFIKIFTGIRRSGKTTLLFSVVDELKNRGISEDNIFYISFESLKYQNITDSVSLNDLILDLIG NVEGKVYLLFDEIQLVDGWEKSINGLHADFSCDIYITGSNSMLLSGEYATLLSGRYIQINVYPFSFKEVLEYKEKVDNIE ITDNIERQLFDEYLEFGGMPGLLELSSSIAKHEALNDIYASIVYNDILGRYPIRKADLFKRFSNYIMNTMGETFSSKSIT SYLKNEVEETSRNTILNFTNYLENAFFISKIRREDLIGKKILKTQQKYYLMDHGFHHTLIESNWLKQTHVLENIVYIELL RRGYEIKIGKIYDKEIDFFCRKDGFECYIQVSYTVADQDTLEREMIPLLRLRNHYDKYIFSMDEHDMSRDGIKHRNILEF LKGDEF
Sequences:
>Translated_406_residues MIRRESYFKIINEFIDTSFIKIFTGIRRSGKTTLLFSVVDELKNRGISEDNIFYISFESLKYQNITDSVSLNDLILDLIG NVEGKVYLLFDEIQLVDGWEKSINGLHADFSCDIYITGSNSMLLSGEYATLLSGRYIQINVYPFSFKEVLEYKEKVDNIE ITDNIERQLFDEYLEFGGMPGLLELSSSIAKHEALNDIYASIVYNDILGRYPIRKADLFKRFSNYIMNTMGETFSSKSIT SYLKNEVEETSRNTILNFTNYLENAFFISKIRREDLIGKKILKTQQKYYLMDHGFHHTLIESNWLKQTHVLENIVYIELL RRGYEIKIGKIYDKEIDFFCRKDGFECYIQVSYTVADQDTLEREMIPLLRLRNHYDKYIFSMDEHDMSRDGIKHRNILEF LKGDEF >Mature_406_residues MIRRESYFKIINEFIDTSFIKIFTGIRRSGKTTLLFSVVDELKNRGISEDNIFYISFESLKYQNITDSVSLNDLILDLIG NVEGKVYLLFDEIQLVDGWEKSINGLHADFSCDIYITGSNSMLLSGEYATLLSGRYIQINVYPFSFKEVLEYKEKVDNIE ITDNIERQLFDEYLEFGGMPGLLELSSSIAKHEALNDIYASIVYNDILGRYPIRKADLFKRFSNYIMNTMGETFSSKSIT SYLKNEVEETSRNTILNFTNYLENAFFISKIRREDLIGKKILKTQQKYYLMDHGFHHTLIESNWLKQTHVLENIVYIELL RRGYEIKIGKIYDKEIDFFCRKDGFECYIQVSYTVADQDTLEREMIPLLRLRNHYDKYIFSMDEHDMSRDGIKHRNILEF LKGDEF
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1544 and MJ1637 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47801; Mature: 47801
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRESYFKIINEFIDTSFIKIFTGIRRSGKTTLLFSVVDELKNRGISEDNIFYISFESL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECE KYQNITDSVSLNDLILDLIGNVEGKVYLLFDEIQLVDGWEKSINGLHADFSCDIYITGSN EECCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHCCCCCCCEEEEEEEECCC SMLLSGEYATLLSGRYIQINVYPFSFKEVLEYKEKVDNIEITDNIERQLFDEYLEFGGMP CEEEECCHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCC GLLELSSSIAKHEALNDIYASIVYNDILGRYPIRKADLFKRFSNYIMNTMGETFSSKSIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH SYLKNEVEETSRNTILNFTNYLENAFFISKIRREDLIGKKILKTQQKYYLMDHGFHHTLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH ESNWLKQTHVLENIVYIELLRRGYEIKIGKIYDKEIDFFCRKDGFECYIQVSYTVADQDT CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHCCCCCCEEEEEEEEEECCHHH LEREMIPLLRLRNHYDKYIFSMDEHDMSRDGIKHRNILEFLKGDEF HHHHHHHHHHHHHHHHHHHEECCHHCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MIRRESYFKIINEFIDTSFIKIFTGIRRSGKTTLLFSVVDELKNRGISEDNIFYISFESL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECE KYQNITDSVSLNDLILDLIGNVEGKVYLLFDEIQLVDGWEKSINGLHADFSCDIYITGSN EECCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCHHHHCCCCCCCEEEEEEEECCC SMLLSGEYATLLSGRYIQINVYPFSFKEVLEYKEKVDNIEITDNIERQLFDEYLEFGGMP CEEEECCHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCC GLLELSSSIAKHEALNDIYASIVYNDILGRYPIRKADLFKRFSNYIMNTMGETFSSKSIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH SYLKNEVEETSRNTILNFTNYLENAFFISKIRREDLIGKKILKTQQKYYLMDHGFHHTLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH ESNWLKQTHVLENIVYIELLRRGYEIKIGKIYDKEIDFFCRKDGFECYIQVSYTVADQDT CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHCCCCCCEEEEEEEEEECCHHH LEREMIPLLRLRNHYDKYIFSMDEHDMSRDGIKHRNILEFLKGDEF HHHHHHHHHHHHHHHHHHHEECCHHCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]