| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489549
Identifier: 84489549
GI number: 84489549
Start: 852094
End: 852612
Strand: Direct
Name: 84489549
Synonym: Msp_0740
Alternate gene names: NA
Gene position: 852094-852612 (Clockwise)
Preceding gene: 84489546
Following gene: 84489553
Centisome position: 48.21
GC content: 25.82
Gene sequence:
>519_bases ATGAAATCAAATATCTTTCTTAGTTACTATCATGAAGATAAAGAGTATAGTGACAAATTTCAAGAATTATTTCAAAATTT GAATACAAAAACAATAAGATTAACAAATAATGACTATTCAAGTGATGAATATATCTCTAATATCATAAATGAAAATAACA TAACAAATACTACAACTACAATAGTACTAGTAGGACCTAAAACATACAAAAGAAAACATATAGATTGGGATATATATGCA GCATTAAAGCAAAAATCATCACTAATAGGCATATGTCTTCCAAATAGGAATGATTATAGACTAAATAATCTAATACTGGA AACATATCCTCCAAGACTACATGATAATGTAACATCAGGTTATGCAACTATAATAAAATGGACAGAAAATCCAGAGAAAA TAGATAACATAATAAAAAGATCATATATAAAATCAGAGGATACAAATCTAATAAATAATAGACGAAAACTACAATCTAAA GATCATCATTTCTGTGGAGTAGGATGTGATTGTCACTAA
Upstream 100 bases:
>100_bases ATTTTTTTATAAGCTTTATATATATACTATTTATTTTTAATAATTATATATATATTTATTACATAAACATCATTAAAGAA GAACACACAATAATATTATT
Downstream 100 bases:
>100_bases AAAAATGAAAGTATATACTTAAAATATATGTATAGTAAATAGTAAATAAGTATTATGTAGTATGTAAAACATACATCATT TTACATTCGTATGTAGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKSNIFLSYYHEDKEYSDKFQELFQNLNTKTIRLTNNDYSSDEYISNIINENNITNTTTTIVLVGPKTYKRKHIDWDIYA ALKQKSSLIGICLPNRNDYRLNNLILETYPPRLHDNVTSGYATIIKWTENPEKIDNIIKRSYIKSEDTNLINNRRKLQSK DHHFCGVGCDCH
Sequences:
>Translated_172_residues MKSNIFLSYYHEDKEYSDKFQELFQNLNTKTIRLTNNDYSSDEYISNIINENNITNTTTTIVLVGPKTYKRKHIDWDIYA ALKQKSSLIGICLPNRNDYRLNNLILETYPPRLHDNVTSGYATIIKWTENPEKIDNIIKRSYIKSEDTNLINNRRKLQSK DHHFCGVGCDCH >Mature_172_residues MKSNIFLSYYHEDKEYSDKFQELFQNLNTKTIRLTNNDYSSDEYISNIINENNITNTTTTIVLVGPKTYKRKHIDWDIYA ALKQKSSLIGICLPNRNDYRLNNLILETYPPRLHDNVTSGYATIIKWTENPEKIDNIIKRSYIKSEDTNLINNRRKLQSK DHHFCGVGCDCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20226; Mature: 20226
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNIFLSYYHEDKEYSDKFQELFQNLNTKTIRLTNNDYSSDEYISNIINENNITNTTTT CCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEE IVLVGPKTYKRKHIDWDIYAALKQKSSLIGICLPNRNDYRLNNLILETYPPRLHDNVTSG EEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEECCCCHHCCCCCCC YATIIKWTENPEKIDNIIKRSYIKSEDTNLINNRRKLQSKDHHFCGVGCDCH EEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCCCC >Mature Secondary Structure MKSNIFLSYYHEDKEYSDKFQELFQNLNTKTIRLTNNDYSSDEYISNIINENNITNTTTT CCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEE IVLVGPKTYKRKHIDWDIYAALKQKSSLIGICLPNRNDYRLNNLILETYPPRLHDNVTSG EEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEECCCCHHCCCCCCC YATIIKWTENPEKIDNIIKRSYIKSEDTNLINNRRKLQSKDHHFCGVGCDCH EEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA