| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489542
Identifier: 84489542
GI number: 84489542
Start: 843543
End: 844040
Strand: Direct
Name: 84489542
Synonym: Msp_0733
Alternate gene names: NA
Gene position: 843543-844040 (Clockwise)
Preceding gene: 84489541
Following gene: 84489546
Centisome position: 47.73
GC content: 26.51
Gene sequence:
>498_bases ATGAATAAACTTCAAGCATATAGTTGTGTATTTATGTTATTTGGTATTATAGGTGGAAGTATCCTAATATTAAATGGTGA TATATTAAGTGGAATCATTTTTGGAGGGGTGGTTACTCTTTGGGGATATCTTGATTATAAATACTATGATACAGGTTTCT TTTTCATAACTTTTGGTATAGTAATGGTTTTAGGTTTTTATTTTGTTAAGTATTTTCTATCTGGAATTCTATTAGGATTA GGTGTTATCAGTATTGGAATAGTTACTTCTATATGTGATTCTAAAACAACTGATGATTATATATGGTTTTTAGCAGGTTG TGGACTTGGAACTATTTATATACATAATGGAGATACTTTTTTAGGAGTTATTATAGCTTCATGTCTTATAACACTATCTA TAGTTGATTATAAATACGATCTTAAGAAGTGTATAAGTAATTTTTTTAATGATGATAAAGATGTTGCAGATGATGAATTA TATTTAGATGAAAAGTAA
Upstream 100 bases:
>100_bases TTGGAGGAAGATGTTTTGAGTATGGTAAAGGAAAACTAATTTCATGGGGAGCTGAAGGCTTCCTTGTTTATGGTACAAAT GTAATGGAGGATAATGCATA
Downstream 100 bases:
>100_bases GGGATGTAATGATATAATGGATAAAAAGGTAATTTCTCTATCTCTTGTATTAGGATCCATTATTGATTGTGCTACTTGAA TATATGTAGTTTTTCCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MNKLQAYSCVFMLFGIIGGSILILNGDILSGIIFGGVVTLWGYLDYKYYDTGFFFITFGIVMVLGFYFVKYFLSGILLGL GVISIGIVTSICDSKTTDDYIWFLAGCGLGTIYIHNGDTFLGVIIASCLITLSIVDYKYDLKKCISNFFNDDKDVADDEL YLDEK
Sequences:
>Translated_165_residues MNKLQAYSCVFMLFGIIGGSILILNGDILSGIIFGGVVTLWGYLDYKYYDTGFFFITFGIVMVLGFYFVKYFLSGILLGL GVISIGIVTSICDSKTTDDYIWFLAGCGLGTIYIHNGDTFLGVIIASCLITLSIVDYKYDLKKCISNFFNDDKDVADDEL YLDEK >Mature_165_residues MNKLQAYSCVFMLFGIIGGSILILNGDILSGIIFGGVVTLWGYLDYKYYDTGFFFITFGIVMVLGFYFVKYFLSGILLGL GVISIGIVTSICDSKTTDDYIWFLAGCGLGTIYIHNGDTFLGVIIASCLITLSIVDYKYDLKKCISNFFNDDKDVADDEL YLDEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18342; Mature: 18342
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLQAYSCVFMLFGIIGGSILILNGDILSGIIFGGVVTLWGYLDYKYYDTGFFFITFGI CCCHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH VMVLGFYFVKYFLSGILLGLGVISIGIVTSICDSKTTDDYIWFLAGCGLGTIYIHNGDTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCEEEEEEECCCHH LGVIIASCLITLSIVDYKYDLKKCISNFFNDDKDVADDELYLDEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCC >Mature Secondary Structure MNKLQAYSCVFMLFGIIGGSILILNGDILSGIIFGGVVTLWGYLDYKYYDTGFFFITFGI CCCHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH VMVLGFYFVKYFLSGILLGLGVISIGIVTSICDSKTTDDYIWFLAGCGLGTIYIHNGDTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCEEEEEEECCCHH LGVIIASCLITLSIVDYKYDLKKCISNFFNDDKDVADDELYLDEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA