| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489524
Identifier: 84489524
GI number: 84489524
Start: 826986
End: 828068
Strand: Direct
Name: 84489524
Synonym: Msp_0715
Alternate gene names: NA
Gene position: 826986-828068 (Clockwise)
Preceding gene: 84489522
Following gene: 84489532
Centisome position: 46.79
GC content: 25.3
Gene sequence:
>1083_bases ATGGGGGATAATAAATCAAGAATTATATACATAGATCAATTACGTACAATAAGTATAATATGGCTTGTTTTAATAAATGT AGCCTTTATATTTAAGTGTCAAAACATGACAACACTTGAGGAATATGTTTTATTTTCATCATTTGCATTTGGTGTACCAA TATTTCTTATGTTACTTGGAGAATTAATGTTGGATAGGGATTATTCTAATCTGGAATTTTTCTTTAAAAATTCATTCTTT AGAATTCTAGTACCATTTTTATTGTGGAATTCAATAATGGCAGTACTAGCAACATCATTAAATTATAGTAATTTTGGACT GAATATTGGAACACTAATAACATTTGCAAGTAATTTCATGACACAACATTGGTATGCATGGATGTTGTTGGGAATATATT TATCATTACCTATATTAAGTGAATTTATAAGAAAATGGCAGTTAAAAGGAGCAGAATATTATTTGATACTTGCAATAATA GCTTCAATAATATATCAATGTCTTGCTTATGTTAATTCACCTAGTTACTTTAATTTAACCTTCTTTATAGGACCATTAAT CTATTTATTTTCAGGTTATTACTTGGAAAATAAGAAGATAAATTTAGATGATAATAAACTTGTTATCATGGGACTTATAT TAACTGTTATTTCAACAGCAATTATAATCTATGATATGATAGTTATAAATCATATGACTTTCACATTATTACTGCATCAT TATAATTTCTATACACATTCCTATCTTGATGTTAGTGTAATAGTACTAGTCCAAGCTACAGGTATATTTCTAGTATTTAA ATATATCAATAAGGATGTAAGTGGAATACTTCTTAAAATAAAAAATATATTACATAATAAATGGATTTTGGATTTTACAA CATCTATAAGTAGATCCTGTTATGGAATTTACCTAACACATCAGAGTATATTGATGTTATTAACTTTAATATTTAGTTTA GATCAAACAAATGAAATGTATGGAATACCCATAATTAGTATTGTAACATTAATATCCAGCTGGCTTTTAATGTTATTACT TAAAAAAGTAGGAATTCCAACAAAATATATTGGTTATGATTAA
Upstream 100 bases:
>100_bases TGTATAAGTTATATTAAAATATATAATAATTTTAAATAGTACATATAACTAAAGTAGTATTGTTTTTTAGAAAAAAAATT TTTAAGAAGGATTATGATAT
Downstream 100 bases:
>100_bases AATAAGTAGATTTTTTTCTCTATTTTTATTTTTTAGAGATTAATTATGTGTTTTATTTTCAAAAAAAAAATTTAAATTAT GTCTTTATTAAAAGACGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MGDNKSRIIYIDQLRTISIIWLVLINVAFIFKCQNMTTLEEYVLFSSFAFGVPIFLMLLGELMLDRDYSNLEFFFKNSFF RILVPFLLWNSIMAVLATSLNYSNFGLNIGTLITFASNFMTQHWYAWMLLGIYLSLPILSEFIRKWQLKGAEYYLILAII ASIIYQCLAYVNSPSYFNLTFFIGPLIYLFSGYYLENKKINLDDNKLVIMGLILTVISTAIIIYDMIVINHMTFTLLLHH YNFYTHSYLDVSVIVLVQATGIFLVFKYINKDVSGILLKIKNILHNKWILDFTTSISRSCYGIYLTHQSILMLLTLIFSL DQTNEMYGIPIISIVTLISSWLLMLLLKKVGIPTKYIGYD
Sequences:
>Translated_360_residues MGDNKSRIIYIDQLRTISIIWLVLINVAFIFKCQNMTTLEEYVLFSSFAFGVPIFLMLLGELMLDRDYSNLEFFFKNSFF RILVPFLLWNSIMAVLATSLNYSNFGLNIGTLITFASNFMTQHWYAWMLLGIYLSLPILSEFIRKWQLKGAEYYLILAII ASIIYQCLAYVNSPSYFNLTFFIGPLIYLFSGYYLENKKINLDDNKLVIMGLILTVISTAIIIYDMIVINHMTFTLLLHH YNFYTHSYLDVSVIVLVQATGIFLVFKYINKDVSGILLKIKNILHNKWILDFTTSISRSCYGIYLTHQSILMLLTLIFSL DQTNEMYGIPIISIVTLISSWLLMLLLKKVGIPTKYIGYD >Mature_359_residues GDNKSRIIYIDQLRTISIIWLVLINVAFIFKCQNMTTLEEYVLFSSFAFGVPIFLMLLGELMLDRDYSNLEFFFKNSFFR ILVPFLLWNSIMAVLATSLNYSNFGLNIGTLITFASNFMTQHWYAWMLLGIYLSLPILSEFIRKWQLKGAEYYLILAIIA SIIYQCLAYVNSPSYFNLTFFIGPLIYLFSGYYLENKKINLDDNKLVIMGLILTVISTAIIIYDMIVINHMTFTLLLHHY NFYTHSYLDVSVIVLVQATGIFLVFKYINKDVSGILLKIKNILHNKWILDFTTSISRSCYGIYLTHQSILMLLTLIFSLD QTNEMYGIPIISIVTLISSWLLMLLLKKVGIPTKYIGYD
Specific function: Unknown
COG id: COG3274
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41762; Mature: 41631
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDNKSRIIYIDQLRTISIIWLVLINVAFIFKCQNMTTLEEYVLFSSFAFGVPIFLMLLG CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ELMLDRDYSNLEFFFKNSFFRILVPFLLWNSIMAVLATSLNYSNFGLNIGTLITFASNFM HHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH TQHWYAWMLLGIYLSLPILSEFIRKWQLKGAEYYLILAIIASIIYQCLAYVNSPSYFNLT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHH FFIGPLIYLFSGYYLENKKINLDDNKLVIMGLILTVISTAIIIYDMIVINHMTFTLLLHH HHHHHHHHHHCCEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YNFYTHSYLDVSVIVLVQATGIFLVFKYINKDVSGILLKIKNILHNKWILDFTTSISRSC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEHHHHCCCC YGIYLTHQSILMLLTLIFSLDQTNEMYGIPIISIVTLISSWLLMLLLKKVGIPTKYIGYD EEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GDNKSRIIYIDQLRTISIIWLVLINVAFIFKCQNMTTLEEYVLFSSFAFGVPIFLMLLG CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ELMLDRDYSNLEFFFKNSFFRILVPFLLWNSIMAVLATSLNYSNFGLNIGTLITFASNFM HHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH TQHWYAWMLLGIYLSLPILSEFIRKWQLKGAEYYLILAIIASIIYQCLAYVNSPSYFNLT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHH FFIGPLIYLFSGYYLENKKINLDDNKLVIMGLILTVISTAIIIYDMIVINHMTFTLLLHH HHHHHHHHHHCCEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YNFYTHSYLDVSVIVLVQATGIFLVFKYINKDVSGILLKIKNILHNKWILDFTTSISRSC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEHHHHCCCC YGIYLTHQSILMLLTLIFSLDQTNEMYGIPIISIVTLISSWLLMLLLKKVGIPTKYIGYD EEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA