| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489490
Identifier: 84489490
GI number: 84489490
Start: 794601
End: 795425
Strand: Direct
Name: 84489490
Synonym: Msp_0681
Alternate gene names: NA
Gene position: 794601-795425 (Clockwise)
Preceding gene: 84489489
Following gene: 84489491
Centisome position: 44.96
GC content: 26.06
Gene sequence:
>825_bases ATGTTTAATAAAAAGATTATAGAATCATCAAGGGAACTTCTTGATTATAAACTACACATCACAGTACTAATTTGTGTTTT AATATCTCAAGCTATTGGAACAGTTACTATAACAATAACTTCAGGATTTAAAATTATAATTCTACCTTTAATATTTTCAT TAATACTAGTTACAATTTTATATTTAGAAAAATATGTTACATGGATTACTAAAAAACAATCAAAAACTTGTGGAAAAATA ATGTTAATTATTATTGGACCATTAATTGCAAAATTAGCAATAACAAGTGGACAAAATATTGATTTATTAGTAAAAACAGG AATAGCCATATTTCTTGAAGAATTAGGTGATATAGGATCAATATTTATAGCATTACCTGTAGCATTGTTACTTGGTTTTA AACGTGAATCTATTGGAATGACAAGTTCCATATGTAGAGAGCCACAAATGGCAGTTATAATAGATAAATATGGTCTTTCT TCAGATGAAGTTAAGGGATTTATGATAGTATATCTTATTGGAATAATACTTGGAACAATTTTTATAAGTATAATTGCAAG TTTTTCATATTTAATTCCACTACATCCATATGCATATGCTTTAGCATGTGGAGTAGGAAGTACAAGTATGAATGTAGCAG CAGTATCATCTCTTATAACTCTTCATCCTGATTTATCAAATCAGTTATTAGCATTTAGTGGAATATCTAATTTAATTTCA TTAATACTAGGGGTATATGTGTATATACTCGTATCATTACCATTAACAGAGAAATTATATGCTTATATAGAACCTATTGT AAGTAAATATATTTTTAAACGTTAA
Upstream 100 bases:
>100_bases TTTTTTTTTAAAATATTTATATAAAATTATAGTTACTAGTAAAAATATTAAAGTATTATTCTATAAACTATTATTATACT ATACAAAGGTAATAATTAAC
Downstream 100 bases:
>100_bases TTCTTTTTTAGACTTTTTTTATTTTATTTTTTTGAATTAGACATTATATTAATCATTAGAATCAAAAATATAATTAGTAA TAAAAATTTTTGGAGAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MFNKKIIESSRELLDYKLHITVLICVLISQAIGTVTITITSGFKIIILPLIFSLILVTILYLEKYVTWITKKQSKTCGKI MLIIIGPLIAKLAITSGQNIDLLVKTGIAIFLEELGDIGSIFIALPVALLLGFKRESIGMTSSICREPQMAVIIDKYGLS SDEVKGFMIVYLIGIILGTIFISIIASFSYLIPLHPYAYALACGVGSTSMNVAAVSSLITLHPDLSNQLLAFSGISNLIS LILGVYVYILVSLPLTEKLYAYIEPIVSKYIFKR
Sequences:
>Translated_274_residues MFNKKIIESSRELLDYKLHITVLICVLISQAIGTVTITITSGFKIIILPLIFSLILVTILYLEKYVTWITKKQSKTCGKI MLIIIGPLIAKLAITSGQNIDLLVKTGIAIFLEELGDIGSIFIALPVALLLGFKRESIGMTSSICREPQMAVIIDKYGLS SDEVKGFMIVYLIGIILGTIFISIIASFSYLIPLHPYAYALACGVGSTSMNVAAVSSLITLHPDLSNQLLAFSGISNLIS LILGVYVYILVSLPLTEKLYAYIEPIVSKYIFKR >Mature_274_residues MFNKKIIESSRELLDYKLHITVLICVLISQAIGTVTITITSGFKIIILPLIFSLILVTILYLEKYVTWITKKQSKTCGKI MLIIIGPLIAKLAITSGQNIDLLVKTGIAIFLEELGDIGSIFIALPVALLLGFKRESIGMTSSICREPQMAVIIDKYGLS SDEVKGFMIVYLIGIILGTIFISIIASFSYLIPLHPYAYALACGVGSTSMNVAAVSSLITLHPDLSNQLLAFSGISNLIS LILGVYVYILVSLPLTEKLYAYIEPIVSKYIFKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30045; Mature: 30045
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNKKIIESSRELLDYKLHITVLICVLISQAIGTVTITITSGFKIIILPLIFSLILVTIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHH YLEKYVTWITKKQSKTCGKIMLIIIGPLIAKLAITSGQNIDLLVKTGIAIFLEELGDIGS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCHHH IFIALPVALLLGFKRESIGMTSSICREPQMAVIIDKYGLSSDEVKGFMIVYLIGIILGTI HHHHHHHHHHHCCCHHHCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH FISIIASFSYLIPLHPYAYALACGVGSTSMNVAAVSSLITLHPDLSNQLLAFSGISNLIS HHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LILGVYVYILVSLPLTEKLYAYIEPIVSKYIFKR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFNKKIIESSRELLDYKLHITVLICVLISQAIGTVTITITSGFKIIILPLIFSLILVTIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHH YLEKYVTWITKKQSKTCGKIMLIIIGPLIAKLAITSGQNIDLLVKTGIAIFLEELGDIGS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCHHH IFIALPVALLLGFKRESIGMTSSICREPQMAVIIDKYGLSSDEVKGFMIVYLIGIILGTI HHHHHHHHHHHCCCHHHCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH FISIIASFSYLIPLHPYAYALACGVGSTSMNVAAVSSLITLHPDLSNQLLAFSGISNLIS HHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LILGVYVYILVSLPLTEKLYAYIEPIVSKYIFKR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA