| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is hisD
Identifier: 84488963
GI number: 84488963
Start: 153476
End: 154699
Strand: Direct
Name: hisD
Synonym: Msp_0134
Alternate gene names: 84488963
Gene position: 153476-154699 (Clockwise)
Preceding gene: 84488959
Following gene: 84488964
Centisome position: 8.68
GC content: 33.58
Gene sequence:
>1224_bases ATGAATTCTAGTGATGTTATACAACCTGTACAGGAAATTATTGCAAATGTATGTGAAAATAAGGATAAAGCATTACATGA TTATACTTTGAAATTTGATAAGGCAGATATCTCTGATTTTAAGGTACCTGTTGAGACTATTAAACAAAGTGTGGAAAATA TTAGTCCTAAACTAAGAAAAGCATTGGAAGATGCAGCAGAAAATATTAGTAAGTTTCATAAAGCACAAATACCATCTGAT TGGACAATGACAGTAAAAGATGGTGTTAAGGCTGGTCAAATTATAAGACCATTATCTCGTGTTGGTTGTTATATTCCTGG TGGAAGGGCAGCATATCCTTCATCCATATTAATGACTGTTATTCCAGCAAAGATTGCTGGTGTAGAAGAGATTATTTGTT GTACTCCTCCAGATAAAGATGGATGTGTTAGTGATGAAATTCTTGCAGCAGCATATATTGCTGGTGTAACTGATATTTAC ATGGTGGGTGGTGCTCAAGCTATAGCAGCAATGGCATATTCTACTCAAACAATACCTTCTGTTGATAAGATTGTAGGACC TGGTAATATTTTTGTAGCAACAGCTAAAAAATTAGTATATGGTGATGTGGATATTGAATTTCCAGCAGGTCCATCTGAAA TGTTAGCATTGGTAGATGAAACAGCAAATCCTGAATATATTGCAACAGAATTATTAGCTCAAGCAGAACATGATCCTAAT GCTGCAACAATACTTGTATCTACATCAAAAGAAGTGGCCCAAAAAACTGTAGAACATGTTATGGAATATCTTAAAACACA AAAAAGAAGTGATATAATAGAAGAATCATTATCTAAATATGGTCATGTTCTAGTGGCAAGTAGTATGGAAGATGCTATAG ATTTTACTAATGCATATGCTCCAGAACACTTGGTTATTGTGACAAAAGATCATTATAAAACATTAGAATCAATAAATAAT GCTGGTTCTATCTTTTTAGGTAATCTTACACCAGTTGCTGGTGGAGATTATGGTTCTGGAACAAACCATGTTCTTCCAAC AAGTGGTGGGGCAAGAATGTATTCTGGTTTATCTGCAGAATCTTTCCTTAAAAAACCAACAATACAAGAATTATCACCTG AAGGTGTTAAAAATATTAAAGACATGGTTATAAACCTAGCAGAAGCAGAAGGATTATATGCTCATGCTTTATCTATTAAA AAAAGAGCAGAAGATATGGAATAA
Upstream 100 bases:
>100_bases ATTTAATTAAGAATATTTAATATAGTTGGAAGGATTTAAATTGCTAGAAATTATAGAGTTAAAACAAGAAGACTTTTCAA AGTATACTCAGAGAATTCAA
Downstream 100 bases:
>100_bases AATATTTTTTCTATTAAATAAATTTATCAATTAAGAAAAATATAAATATATATTAATATTTTATTAATTTTAACTAAAAT CATAAAATGAATACATAGGT
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MNSSDVIQPVQEIIANVCENKDKALHDYTLKFDKADISDFKVPVETIKQSVENISPKLRKALEDAAENISKFHKAQIPSD WTMTVKDGVKAGQIIRPLSRVGCYIPGGRAAYPSSILMTVIPAKIAGVEEIICCTPPDKDGCVSDEILAAAYIAGVTDIY MVGGAQAIAAMAYSTQTIPSVDKIVGPGNIFVATAKKLVYGDVDIEFPAGPSEMLALVDETANPEYIATELLAQAEHDPN AATILVSTSKEVAQKTVEHVMEYLKTQKRSDIIEESLSKYGHVLVASSMEDAIDFTNAYAPEHLVIVTKDHYKTLESINN AGSIFLGNLTPVAGGDYGSGTNHVLPTSGGARMYSGLSAESFLKKPTIQELSPEGVKNIKDMVINLAEAEGLYAHALSIK KRAEDME
Sequences:
>Translated_407_residues MNSSDVIQPVQEIIANVCENKDKALHDYTLKFDKADISDFKVPVETIKQSVENISPKLRKALEDAAENISKFHKAQIPSD WTMTVKDGVKAGQIIRPLSRVGCYIPGGRAAYPSSILMTVIPAKIAGVEEIICCTPPDKDGCVSDEILAAAYIAGVTDIY MVGGAQAIAAMAYSTQTIPSVDKIVGPGNIFVATAKKLVYGDVDIEFPAGPSEMLALVDETANPEYIATELLAQAEHDPN AATILVSTSKEVAQKTVEHVMEYLKTQKRSDIIEESLSKYGHVLVASSMEDAIDFTNAYAPEHLVIVTKDHYKTLESINN AGSIFLGNLTPVAGGDYGSGTNHVLPTSGGARMYSGLSAESFLKKPTIQELSPEGVKNIKDMVINLAEAEGLYAHALSIK KRAEDME >Mature_407_residues MNSSDVIQPVQEIIANVCENKDKALHDYTLKFDKADISDFKVPVETIKQSVENISPKLRKALEDAAENISKFHKAQIPSD WTMTVKDGVKAGQIIRPLSRVGCYIPGGRAAYPSSILMTVIPAKIAGVEEIICCTPPDKDGCVSDEILAAAYIAGVTDIY MVGGAQAIAAMAYSTQTIPSVDKIVGPGNIFVATAKKLVYGDVDIEFPAGPSEMLALVDETANPEYIATELLAQAEHDPN AATILVSTSKEVAQKTVEHVMEYLKTQKRSDIIEESLSKYGHVLVASSMEDAIDFTNAYAPEHLVIVTKDHYKTLESINN AGSIFLGNLTPVAGGDYGSGTNHVLPTSGGARMYSGLSAESFLKKPTIQELSPEGVKNIKDMVINLAEAEGLYAHALSIK KRAEDME
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=403, Percent_Identity=40.6947890818859, Blast_Score=321, Evalue=5e-89, Organism=Saccharomyces cerevisiae, GI6319819, Length=410, Percent_Identity=39.5121951219512, Blast_Score=300, Evalue=4e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 43793; Mature: 43793
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSDVIQPVQEIIANVCENKDKALHDYTLKFDKADISDFKVPVETIKQSVENISPKLRK CCCHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHH ALEDAAENISKFHKAQIPSDWTMTVKDGVKAGQIIRPLSRVGCYIPGGRAAYPSSILMTV HHHHHHHHHHHHHHHCCCCCCEEEHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH IPAKIAGVEEIICCTPPDKDGCVSDEILAAAYIAGVTDIYMVGGAQAIAAMAYSTQTIPS HHHHHCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCCCC VDKIVGPGNIFVATAKKLVYGDVDIEFPAGPSEMLALVDETANPEYIATELLAQAEHDPN HHHHCCCCCEEEEEHHHHEEECCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC AATILVSTSKEVAQKTVEHVMEYLKTQKRSDIIEESLSKYGHVLVASSMEDAIDFTNAYA CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCC PEHLVIVTKDHYKTLESINNAGSIFLGNLTPVAGGDYGSGTNHVLPTSGGARMYSGLSAE CCEEEEEECHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCHHHHCCCCHH SFLKKPTIQELSPEGVKNIKDMVINLAEAEGLYAHALSIKKRAEDME HHHCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNSSDVIQPVQEIIANVCENKDKALHDYTLKFDKADISDFKVPVETIKQSVENISPKLRK CCCHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHH ALEDAAENISKFHKAQIPSDWTMTVKDGVKAGQIIRPLSRVGCYIPGGRAAYPSSILMTV HHHHHHHHHHHHHHHCCCCCCEEEHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH IPAKIAGVEEIICCTPPDKDGCVSDEILAAAYIAGVTDIYMVGGAQAIAAMAYSTQTIPS HHHHHCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCCCC VDKIVGPGNIFVATAKKLVYGDVDIEFPAGPSEMLALVDETANPEYIATELLAQAEHDPN HHHHCCCCCEEEEEHHHHEEECCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC AATILVSTSKEVAQKTVEHVMEYLKTQKRSDIIEESLSKYGHVLVASSMEDAIDFTNAYA CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCC PEHLVIVTKDHYKTLESINNAGSIFLGNLTPVAGGDYGSGTNHVLPTSGGARMYSGLSAE CCEEEEEECHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCHHHHCCCCHH SFLKKPTIQELSPEGVKNIKDMVINLAEAEGLYAHALSIKKRAEDME HHHCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]