Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is yfcK [C]

Identifier: 84488906

GI number: 84488906

Start: 90827

End: 92029

Strand: Direct

Name: yfcK [C]

Synonym: Msp_0076

Alternate gene names: 84488906

Gene position: 90827-92029 (Clockwise)

Preceding gene: 84488903

Following gene: 84488908

Centisome position: 5.14

GC content: 29.93

Gene sequence:

>1203_bases
ATGGACGATAATCAAGAGGATTCACGACTTGAAATGTCACAACAAAATAAACAAATAATACAACAAGTCTTTGAATTAGA
ATTAGATGGTCATAAAGATGCAAGAGAGTTATATAAAGAAGAAATAGCAGGATTTTTAATTAAAACAGATGATGGATCCT
ATACTTTATCATCAGAAAAACGTTCTGATGGTATAGAGACATTACATAGTACTTTTGGTGCACGTACAGAGGCATTTGAA
AAATTTGCAATTCCATCTAAACTTAAAGAAAAAGCAGAATCAAGAAAAATTATACGGGTTTTAGATATATGTAGTGGTAT
TGGATATAATGTATCAGCATTACTTGACTATTTAAATGATAGTGATGTTGTAATAGAAGTTGATATGGTTGAATCCTCTT
TAGAAACATTGGCAACTACCCTTTTTATTCCAGATATATGTAAATCCCATGGTTTTGTTAAGAAAACAATAGAACTTTAC
TTAATAGAAAATGGTTATCTACAGTATAATAAAGTTCTAAGTGACATTCCCTCAAATATTAAATTAAATATTCATGTCTG
TGATGCACGTGATTTTTTAAAAGAAAATGCAAATAAAGAGTATGATGCAGTATTTTTAGATCCATTTAGTCCAGCTAAAT
GTCCGGAATTATATACTGTTGATTTTTTCAATAAATTAAAAGAATTCTTAACAACAACTTCTCTTATATTAACATATACA
GCTGCAAGTGCAGTTAGAAGTGCTATGATTAAGGTAGGTTTACATGTTGGTGAAGGTCCACAGTTTCATAGAAGTGGTGG
AACAATAGCTTCAAAATGTTTTGACTTGTTAGATAAACCCTTAGCATTTGGTGATGAGAAGGTTATAGCTTTAAGTGATG
TTGGAGTTCCATATATGGATCCTGATTTATCTGATGATTATAACACAATAATTGCAAGAAGACAATCTATACGTAGTAAG
ATTAGAGGAGTATCTGTATTTCCATCTTCAAGTAAACTTCCACGTTATCTTGGAATTGATCCTATGGAGATTGAAGATGA
AACATTACGTGATAAATTAAATGGTTATGTTCAAAATATGGGATTTGAAGCATTAAATGATCCAAGAATTTTAAGTATGT
TGGATATAGATAGAAATGCACCTAGTAAGAATCAGGTTCTTGAATTAGAGCAGAATATGGAATATATATTAAATTCAATA
TAG

Upstream 100 bases:

>100_bases
AATGTTTTTTAATTTTATTTTTTTTTTCTATAGATAATTAAATTGGATCAAATTTAAAAATAAGGTAACAAAAATTAACT
TAAAATATTAAGGTGAAGTT

Downstream 100 bases:

>100_bases
TTAGGTAATATTATACTACCTAACAATAATTATTATATTGACTATACTTGTTTCTATTTTTATTAGATCTTTCTATGTTA
ATAGCACTAACTTCTCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MDDNQEDSRLEMSQQNKQIIQQVFELELDGHKDARELYKEEIAGFLIKTDDGSYTLSSEKRSDGIETLHSTFGARTEAFE
KFAIPSKLKEKAESRKIIRVLDICSGIGYNVSALLDYLNDSDVVIEVDMVESSLETLATTLFIPDICKSHGFVKKTIELY
LIENGYLQYNKVLSDIPSNIKLNIHVCDARDFLKENANKEYDAVFLDPFSPAKCPELYTVDFFNKLKEFLTTTSLILTYT
AASAVRSAMIKVGLHVGEGPQFHRSGGTIASKCFDLLDKPLAFGDEKVIALSDVGVPYMDPDLSDDYNTIIARRQSIRSK
IRGVSVFPSSSKLPRYLGIDPMEIEDETLRDKLNGYVQNMGFEALNDPRILSMLDIDRNAPSKNQVLELEQNMEYILNSI

Sequences:

>Translated_400_residues
MDDNQEDSRLEMSQQNKQIIQQVFELELDGHKDARELYKEEIAGFLIKTDDGSYTLSSEKRSDGIETLHSTFGARTEAFE
KFAIPSKLKEKAESRKIIRVLDICSGIGYNVSALLDYLNDSDVVIEVDMVESSLETLATTLFIPDICKSHGFVKKTIELY
LIENGYLQYNKVLSDIPSNIKLNIHVCDARDFLKENANKEYDAVFLDPFSPAKCPELYTVDFFNKLKEFLTTTSLILTYT
AASAVRSAMIKVGLHVGEGPQFHRSGGTIASKCFDLLDKPLAFGDEKVIALSDVGVPYMDPDLSDDYNTIIARRQSIRSK
IRGVSVFPSSSKLPRYLGIDPMEIEDETLRDKLNGYVQNMGFEALNDPRILSMLDIDRNAPSKNQVLELEQNMEYILNSI
>Mature_400_residues
MDDNQEDSRLEMSQQNKQIIQQVFELELDGHKDARELYKEEIAGFLIKTDDGSYTLSSEKRSDGIETLHSTFGARTEAFE
KFAIPSKLKEKAESRKIIRVLDICSGIGYNVSALLDYLNDSDVVIEVDMVESSLETLATTLFIPDICKSHGFVKKTIELY
LIENGYLQYNKVLSDIPSNIKLNIHVCDARDFLKENANKEYDAVFLDPFSPAKCPELYTVDFFNKLKEFLTTTSLILTYT
AASAVRSAMIKVGLHVGEGPQFHRSGGTIASKCFDLLDKPLAFGDEKVIALSDVGVPYMDPDLSDDYNTIIARRQSIRSK
IRGVSVFPSSSKLPRYLGIDPMEIEDETLRDKLNGYVQNMGFEALNDPRILSMLDIDRNAPSKNQVLELEQNMEYILNSI

Specific function: Unknown

COG id: COG4121

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008471 [H]

Pfam domain/function: PF05430 DUF752 [H]

EC number: NA

Molecular weight: Translated: 45110; Mature: 45110

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDNQEDSRLEMSQQNKQIIQQVFELELDGHKDARELYKEEIAGFLIKTDDGSYTLSSEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCEEECCCH
RSDGIETLHSTFGARTEAFEKFAIPSKLKEKAESRKIIRVLDICSGIGYNVSALLDYLND
HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
SDVVIEVDMVESSLETLATTLFIPDICKSHGFVKKTIELYLIENGYLQYNKVLSDIPSNI
CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCE
KLNIHVCDARDFLKENANKEYDAVFLDPFSPAKCPELYTVDFFNKLKEFLTTTSLILTYT
EEEEEEECHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
AASAVRSAMIKVGLHVGEGPQFHRSGGTIASKCFDLLDKPLAFGDEKVIALSDVGVPYMD
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCEEEEECCCCCCCC
PDLSDDYNTIIARRQSIRSKIRGVSVFPSSSKLPRYLGIDPMEIEDETLRDKLNGYVQNM
CCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHC
GFEALNDPRILSMLDIDRNAPSKNQVLELEQNMEYILNSI
CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDDNQEDSRLEMSQQNKQIIQQVFELELDGHKDARELYKEEIAGFLIKTDDGSYTLSSEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCEEECCCH
RSDGIETLHSTFGARTEAFEKFAIPSKLKEKAESRKIIRVLDICSGIGYNVSALLDYLND
HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
SDVVIEVDMVESSLETLATTLFIPDICKSHGFVKKTIELYLIENGYLQYNKVLSDIPSNI
CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCE
KLNIHVCDARDFLKENANKEYDAVFLDPFSPAKCPELYTVDFFNKLKEFLTTTSLILTYT
EEEEEEECHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
AASAVRSAMIKVGLHVGEGPQFHRSGGTIASKCFDLLDKPLAFGDEKVIALSDVGVPYMD
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCEEEEECCCCCCCC
PDLSDDYNTIIARRQSIRSKIRGVSVFPSSSKLPRYLGIDPMEIEDETLRDKLNGYVQNM
CCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHC
GFEALNDPRILSMLDIDRNAPSKNQVLELEQNMEYILNSI
CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]