Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84488876

Identifier: 84488876

GI number: 84488876

Start: 50256

End: 52901

Strand: Direct

Name: 84488876

Synonym: Msp_0046

Alternate gene names: NA

Gene position: 50256-52901 (Clockwise)

Preceding gene: 84488875

Following gene: 84488889

Centisome position: 2.84

GC content: 28.91

Gene sequence:

>2646_bases
ATGTCTATGATATTATTAGGTATATCAGCAGTATCTGCAGAAAATACTACACACAGTATAACTGATACTCCAACAGTATC
AACCAGTACTGCAGATATGTCTAAAACAGTTTCCACTAAAACTGTAGCAGAAAATACAGAAGTTAGTGAAAATACATATA
CAATTCATGCAAAAACAAATGAAGTTACACACTCAACCACACAAAAAGAGGTCACACAAAAATCCATAAAAACAGCACAA
GACTTATCAAGTACAAATAAATCATTAAAAGGTACTATACCAACAAGAATGTCAGTAACTAATAAAATAACAACATATAA
TACAAAAGTACAATTAACAGCAACAGTAGTTAACAATAAAACAAATGAATATGTAACAGAAGGTAATGTAACCTTTAAAA
TCAATAATTCACCAATTGCAACATCAAAAATAACTAATGGAAAAGCACATTGTACATATAATCCAATTAATTTAACACCA
AAAAAATACACAATTACAGCAATATATTCTGGAACCCATGTATTTAAAAATTCATCAGCAACAGGAACATTAACAGTAAC
TAAGAAAAACAGTAACATGGTATTATCTGACAAGGTAATATCATATGGAAATAAAGTTCAGCTAGTAGCTACAATCACTG
ATAAAAATACTAAATCCTATGTTTCTAATGGTAAGGTTGCTTTCAAAGTTAATGATAAAACTGTTGGTTATGGTAGTGTT
TCTAATGGTAAGGCTTATTATACTTATGATTCTAGTAAGTTATCTGCTAAATCCTACAAATTATCTGCAGTATTTGGAGA
AACTTCCCAGTATCTATCATCAAAAGATAATGCTTTATTAACTGTAAATAAAAGAAATTCTACGATAGTTGTATCAGATA
AAGTAATATCATATGGAAATAAAGTTCAGCTAGTAGCTACAATCACTGATAAAAATACTAAATCCTATGTTTCTAATGGT
AAGGTTGCTTTCAAAGTTAATGATAAAACTGTTGGTTATGGTAGTGTTTCTAGTGGTAAGGCTTATTATACTTATGATTC
TAGTAAGTTATCTGCTAAATCCTACAAATTATCTGCAGTATTTGGAGAAACTTCCCAGTATCTATCATCAAAAGATAATG
CTCTACTAACTGTAAATAAAAGAAATTCTACAATAGTTGTATCAGATAAAGTAATATCATATGGAAATAAGGTTCAGCTA
GTAGCTACAATCACTGATAAAAATACTAAATCCTATGTTTCTAATGGTAAGGTTGCTTTCAAAGTTAATGATAAAACTGT
TGGTTATGGTAGTGTTTCTAATGGTAAGGCTTATTATACTTATGATTCTAGTAAGTTATCTGCTAAATCCTACAAATTAT
CTGCAGTATTTGGAGAAACTTCCCAGTATCTATCATCAAAAGATAATGCTTTATTAACTATAAATAAACTAAACTCTACA
ATTTCATTAGCTGATAAATCAGTTCTCGCTGGAAATAAGATTCAATTAGTAGCAACAATTACTAATAAAAATAACAACGC
ATACATTTCTAATGGTAAGGTTGCTTTCAAAGTTAATGGAAAAACTATTGGTTATGGTAGTGTTTCTAGTGGTAAAGCAT
ACTATACATATAATACCGCGGAATTAGATACAGGAAAATATAAGTTAACAGCAACATATGGTGGAAATAACATATATTCA
TCATCAATAGCTACAACAAAAACATTAACAGTACTTAAAAATACTTTCACATATACTCAAATAAGAAATGCAGCAATATC
TGTGAGAAATCAATTTGAATCTAATAAAATAGTAAGTACAGTAACAGTAGGATCAACAACAATGGGTCTACAAGATTTCT
TACCTTTAATGATACATATGGCTAAAAATGTATATCAGGGAAAATCATCAACACCTGTTGAATACAAACATTATGCACCA
ATATCTAAACAAACAGATTCAATGAAATCAGTAGTATTATCAGACTCTCAGGTATTAAATATTGGAAATCAAGTACTAAA
CTACTATCAAAGTAATTCAAAAGCACCAGAATATATAACAACATCATGGGGAAAATTTGGTTACTATAACATAGTATATA
CATATACTAAGATGATTGATGTATCAACTTCAAAATATCTTCCATCATCATGTAAAATATATAATTGGAATACAATACAT
CCAACAAATGTTAAATCAAGATTAGTAGTAATATCAACAGATAACATATTTACCACATCAAAAGATAAGGCATTTGTAAA
TAGTATTAAAAAAATTCTTGAAAGTAAAGGATTTACAGTAAAACTATTAGGAGTAGGACCAAATACACATAATGCAGCAA
TATGGGAAAAATCATTACCAGACAATGCAATACAATTATCAGTATTTGGTGGAGCAGATGCTGGAGTAATATATGATGTA
TGTACAAGAAGTTTCATGCGAGCAAAAGCAAATAGATTAGTATTCTTTGCATATCATTCAGCTACAGCTAAAGATATAAC
AGGACTTGACTGGTTAGAACGTGCACATGATGATAACTACAGTCCAAGTAGCTTTAAAGGAATAGCTCATCCTGATACAT
ATCTTAAATCACATGGTTATGATTATGTATATACAAGTAATGTAAATACAATAGTAGATGCATTATTAAAATATGTAAGT
GGTTAA

Upstream 100 bases:

>100_bases
TAAGTAAGGTTTTTAGAAGAATTAATTTATTATAATAGAATTTTATTAAATAATTTAATTAGGAGTTGTTAAAATTAAAA
AACTATTTATCATAGTCTTA

Downstream 100 bases:

>100_bases
ATAATCCACTTATAATTTCCTTTTTTTAAAATCAGTATTAAGTCATAATATCTATTTTTAATATATTATTTTCTAAAAAA
AAGTATGGGATGATCATGAT

Product: asn/thr-rich large protein family protein

Products: NA

Alternate protein names: Adhesin-Like Protein

Number of amino acids: Translated: 881; Mature: 880

Protein sequence:

>881_residues
MSMILLGISAVSAENTTHSITDTPTVSTSTADMSKTVSTKTVAENTEVSENTYTIHAKTNEVTHSTTQKEVTQKSIKTAQ
DLSSTNKSLKGTIPTRMSVTNKITTYNTKVQLTATVVNNKTNEYVTEGNVTFKINNSPIATSKITNGKAHCTYNPINLTP
KKYTITAIYSGTHVFKNSSATGTLTVTKKNSNMVLSDKVISYGNKVQLVATITDKNTKSYVSNGKVAFKVNDKTVGYGSV
SNGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTVNKRNSTIVVSDKVISYGNKVQLVATITDKNTKSYVSNG
KVAFKVNDKTVGYGSVSSGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTVNKRNSTIVVSDKVISYGNKVQL
VATITDKNTKSYVSNGKVAFKVNDKTVGYGSVSNGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTINKLNST
ISLADKSVLAGNKIQLVATITNKNNNAYISNGKVAFKVNGKTIGYGSVSSGKAYYTYNTAELDTGKYKLTATYGGNNIYS
SSIATTKTLTVLKNTFTYTQIRNAAISVRNQFESNKIVSTVTVGSTTMGLQDFLPLMIHMAKNVYQGKSSTPVEYKHYAP
ISKQTDSMKSVVLSDSQVLNIGNQVLNYYQSNSKAPEYITTSWGKFGYYNIVYTYTKMIDVSTSKYLPSSCKIYNWNTIH
PTNVKSRLVVISTDNIFTTSKDKAFVNSIKKILESKGFTVKLLGVGPNTHNAAIWEKSLPDNAIQLSVFGGADAGVIYDV
CTRSFMRAKANRLVFFAYHSATAKDITGLDWLERAHDDNYSPSSFKGIAHPDTYLKSHGYDYVYTSNVNTIVDALLKYVS
G

Sequences:

>Translated_881_residues
MSMILLGISAVSAENTTHSITDTPTVSTSTADMSKTVSTKTVAENTEVSENTYTIHAKTNEVTHSTTQKEVTQKSIKTAQ
DLSSTNKSLKGTIPTRMSVTNKITTYNTKVQLTATVVNNKTNEYVTEGNVTFKINNSPIATSKITNGKAHCTYNPINLTP
KKYTITAIYSGTHVFKNSSATGTLTVTKKNSNMVLSDKVISYGNKVQLVATITDKNTKSYVSNGKVAFKVNDKTVGYGSV
SNGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTVNKRNSTIVVSDKVISYGNKVQLVATITDKNTKSYVSNG
KVAFKVNDKTVGYGSVSSGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTVNKRNSTIVVSDKVISYGNKVQL
VATITDKNTKSYVSNGKVAFKVNDKTVGYGSVSNGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTINKLNST
ISLADKSVLAGNKIQLVATITNKNNNAYISNGKVAFKVNGKTIGYGSVSSGKAYYTYNTAELDTGKYKLTATYGGNNIYS
SSIATTKTLTVLKNTFTYTQIRNAAISVRNQFESNKIVSTVTVGSTTMGLQDFLPLMIHMAKNVYQGKSSTPVEYKHYAP
ISKQTDSMKSVVLSDSQVLNIGNQVLNYYQSNSKAPEYITTSWGKFGYYNIVYTYTKMIDVSTSKYLPSSCKIYNWNTIH
PTNVKSRLVVISTDNIFTTSKDKAFVNSIKKILESKGFTVKLLGVGPNTHNAAIWEKSLPDNAIQLSVFGGADAGVIYDV
CTRSFMRAKANRLVFFAYHSATAKDITGLDWLERAHDDNYSPSSFKGIAHPDTYLKSHGYDYVYTSNVNTIVDALLKYVS
G
>Mature_880_residues
SMILLGISAVSAENTTHSITDTPTVSTSTADMSKTVSTKTVAENTEVSENTYTIHAKTNEVTHSTTQKEVTQKSIKTAQD
LSSTNKSLKGTIPTRMSVTNKITTYNTKVQLTATVVNNKTNEYVTEGNVTFKINNSPIATSKITNGKAHCTYNPINLTPK
KYTITAIYSGTHVFKNSSATGTLTVTKKNSNMVLSDKVISYGNKVQLVATITDKNTKSYVSNGKVAFKVNDKTVGYGSVS
NGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTVNKRNSTIVVSDKVISYGNKVQLVATITDKNTKSYVSNGK
VAFKVNDKTVGYGSVSSGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTVNKRNSTIVVSDKVISYGNKVQLV
ATITDKNTKSYVSNGKVAFKVNDKTVGYGSVSNGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTINKLNSTI
SLADKSVLAGNKIQLVATITNKNNNAYISNGKVAFKVNGKTIGYGSVSSGKAYYTYNTAELDTGKYKLTATYGGNNIYSS
SIATTKTLTVLKNTFTYTQIRNAAISVRNQFESNKIVSTVTVGSTTMGLQDFLPLMIHMAKNVYQGKSSTPVEYKHYAPI
SKQTDSMKSVVLSDSQVLNIGNQVLNYYQSNSKAPEYITTSWGKFGYYNIVYTYTKMIDVSTSKYLPSSCKIYNWNTIHP
TNVKSRLVVISTDNIFTTSKDKAFVNSIKKILESKGFTVKLLGVGPNTHNAAIWEKSLPDNAIQLSVFGGADAGVIYDVC
TRSFMRAKANRLVFFAYHSATAKDITGLDWLERAHDDNYSPSSFKGIAHPDTYLKSHGYDYVYTSNVNTIVDALLKYVSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96069; Mature: 95938

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMILLGISAVSAENTTHSITDTPTVSTSTADMSKTVSTKTVAENTEVSENTYTIHAKTN
CEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCEEEEEEECC
EVTHSTTQKEVTQKSIKTAQDLSSTNKSLKGTIPTRMSVTNKITTYNTKVQLTATVVNNK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEEEEEEEEEEEECCC
TNEYVTEGNVTFKINNSPIATSKITNGKAHCTYNPINLTPKKYTITAIYSGTHVFKNSSA
CCCEEECCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCEEEEEEEEECCEEEECCCC
TGTLTVTKKNSNMVLSDKVISYGNKVQLVATITDKNTKSYVSNGKVAFKVNDKTVGYGSV
CEEEEEEECCCCEEEECHHHCCCCEEEEEEEEECCCCHHHHCCCEEEEEECCCEEECCCC
SNGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTVNKRNSTIVVSDKVISYGN
CCCEEEEEECCCCCCCCEEEEEEEECCHHHHHCCCCCEEEEEECCCCEEEEECCEECCCC
KVQLVATITDKNTKSYVSNGKVAFKVNDKTVGYGSVSSGKAYYTYDSSKLSAKSYKLSAV
EEEEEEEEECCCCHHHHCCCEEEEEECCCEEECCCCCCCEEEEEECCCCCCCCEEEEEEE
FGETSQYLSSKDNALLTVNKRNSTIVVSDKVISYGNKVQLVATITDKNTKSYVSNGKVAF
ECCHHHHHCCCCCEEEEEECCCCEEEEECCEECCCCEEEEEEEEECCCCHHHHCCCEEEE
KVNDKTVGYGSVSNGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTINKLNST
EECCCEEECCCCCCCEEEEEECCCCCCCCEEEEEEEECCHHHHHCCCCCEEEEEEECCCE
ISLADKSVLAGNKIQLVATITNKNNNAYISNGKVAFKVNGKTIGYGSVSSGKAYYTYNTA
EEECCCEEECCCEEEEEEEEECCCCCEEEECCEEEEEECCEEEECCCCCCCEEEEEEECE
ELDTGKYKLTATYGGNNIYSSSIATTKTLTVLKNTFTYTQIRNAAISVRNQFESNKIVST
EECCCCEEEEEEECCCEEECCCCCCCEEEEEHHCCEEEEHHHHHHHEEHHHCCCCCEEEE
VTVGSTTMGLQDFLPLMIHMAKNVYQGKSSTPVEYKHYAPISKQTDSMKSVVLSDSQVLN
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHEEECCCCEEH
IGNQVLNYYQSNSKAPEYITTSWGKFGYYNIVYTYTKMIDVSTSKYLPSSCKIYNWNTIH
HHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEECCCCC
PTNVKSRLVVISTDNIFTTSKDKAFVNSIKKILESKGFTVKLLGVGPNTHNAAIWEKSLP
CCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCC
DNAIQLSVFGGADAGVIYDVCTRSFMRAKANRLVFFAYHSATAKDITGLDWLERAHDDNY
CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCC
SPSSFKGIAHPDTYLKSHGYDYVYTSNVNTIVDALLKYVSG
CCCCCCCCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SMILLGISAVSAENTTHSITDTPTVSTSTADMSKTVSTKTVAENTEVSENTYTIHAKTN
EEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCEEEEEEECC
EVTHSTTQKEVTQKSIKTAQDLSSTNKSLKGTIPTRMSVTNKITTYNTKVQLTATVVNNK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEEEEEEEEEEEECCC
TNEYVTEGNVTFKINNSPIATSKITNGKAHCTYNPINLTPKKYTITAIYSGTHVFKNSSA
CCCEEECCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCEEEEEEEEECCEEEECCCC
TGTLTVTKKNSNMVLSDKVISYGNKVQLVATITDKNTKSYVSNGKVAFKVNDKTVGYGSV
CEEEEEEECCCCEEEECHHHCCCCEEEEEEEEECCCCHHHHCCCEEEEEECCCEEECCCC
SNGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTVNKRNSTIVVSDKVISYGN
CCCEEEEEECCCCCCCCEEEEEEEECCHHHHHCCCCCEEEEEECCCCEEEEECCEECCCC
KVQLVATITDKNTKSYVSNGKVAFKVNDKTVGYGSVSSGKAYYTYDSSKLSAKSYKLSAV
EEEEEEEEECCCCHHHHCCCEEEEEECCCEEECCCCCCCEEEEEECCCCCCCCEEEEEEE
FGETSQYLSSKDNALLTVNKRNSTIVVSDKVISYGNKVQLVATITDKNTKSYVSNGKVAF
ECCHHHHHCCCCCEEEEEECCCCEEEEECCEECCCCEEEEEEEEECCCCHHHHCCCEEEE
KVNDKTVGYGSVSNGKAYYTYDSSKLSAKSYKLSAVFGETSQYLSSKDNALLTINKLNST
EECCCEEECCCCCCCEEEEEECCCCCCCCEEEEEEEECCHHHHHCCCCCEEEEEEECCCE
ISLADKSVLAGNKIQLVATITNKNNNAYISNGKVAFKVNGKTIGYGSVSSGKAYYTYNTA
EEECCCEEECCCEEEEEEEEECCCCCEEEECCEEEEEECCEEEECCCCCCCEEEEEEECE
ELDTGKYKLTATYGGNNIYSSSIATTKTLTVLKNTFTYTQIRNAAISVRNQFESNKIVST
EECCCCEEEEEEECCCEEECCCCCCCEEEEEHHCCEEEEHHHHHHHEEHHHCCCCCEEEE
VTVGSTTMGLQDFLPLMIHMAKNVYQGKSSTPVEYKHYAPISKQTDSMKSVVLSDSQVLN
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHEEECCCCEEH
IGNQVLNYYQSNSKAPEYITTSWGKFGYYNIVYTYTKMIDVSTSKYLPSSCKIYNWNTIH
HHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEECCCCC
PTNVKSRLVVISTDNIFTTSKDKAFVNSIKKILESKGFTVKLLGVGPNTHNAAIWEKSLP
CCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCC
DNAIQLSVFGGADAGVIYDVCTRSFMRAKANRLVFFAYHSATAKDITGLDWLERAHDDNY
CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCC
SPSSFKGIAHPDTYLKSHGYDYVYTSNVNTIVDALLKYVSG
CCCCCCCCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA