| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yfgL [H]
Identifier: 83721638
GI number: 83721638
Start: 2514443
End: 2515588
Strand: Direct
Name: yfgL [H]
Synonym: BTH_I2237
Alternate gene names: 83721638
Gene position: 2514443-2515588 (Clockwise)
Preceding gene: 83720781
Following gene: 161723167
Centisome position: 66.01
GC content: 69.02
Gene sequence:
>1146_bases ATGAATCTGCTGAAACGTTACGCTGCACCCGTTGCCTGCGCGGCGGCCGTCCTGGTTCTCGCGGCCTGTTCGTCAACGAA GGACGCGCGCCGCGTGCCGACGCCGCTCACCGAGTTCAAACCCGTGCTCGACGTGCAGCAAGTGTGGAAGGCGAGCGTCG GCAAGGGCGGCCGCTACTCGTTCTCGCCCGTCGCGGTGGGCGACGCCGTGTATGTCGCCGGCGCGAACGGTTCGGTCGAG AAGATCGACGCGAAGACGGGCCAGGAAGTCTGGCGCACGAAGATCGGCTCCGATCTGTCGGCGGGCGTCGGCAGCGACGG CAACCTGACCGCGGTCGGCGCGCTGAAGGGCGGCGTGTTCGTACTCGGCCCGGACGGCAAGCAGCTGTGGAAGACCGCGG TGCAAGGCGAGATTTTCTCGCCGCCGCTCGTCGGCAACGGCCTCGTGATCGTGCGCACGATTGACGGCCGGGTGATCGCG TTCGCCGCGCAGACGGGCGAGCAGAAGTGGACTTACCGCAACCGCGCGGTGCCGCTCAATCTGCGCGTGTCGGCCGGCAT GACGTTCGCGGGCGACGCCGCGGTGCTCGCGGGCTTCCCGGGCGGCGGCCTCGTCGCGCTGAACCTGCAGACGGGCGAGC CGTTCTGGCAGACGCCCGTGTCGTTCCCGAAGGGCGTGACCGAAGTCGAGCGGATCAACGACGTAACGGGCGCGCCGACG CTCGTCGGCGCCGAGACGTGCGCAGTGACGTTCCAGGGCCAGCTCGGCTGCTTCGATGCGAACTCGGGCCGTCCGCTGTG GGAGAAAGCGTTTTCTAGCCGCAGCGGCGTCGCACAGGACGATGCGGTTGTCGTGGGCGGCGACGACTGGTCGGTCGTGT CGGCTTACGACGTCGCGACGGGCAAGGAGCTTTGGCGCAACGACAAGCTGAAGAGCCGCGACGTCGGCGTGCCGTACCTG CTCGGCCGCGCGGTCGTGCTCGGCGATTACAAGGGCTTCGTGCACTTCCTGTCGCGCGACGATGGCGCGTTCGTCGCCCG GATGAAGACGGACGGCAGCGCGATCGCCGCGGCGCCCGTGCTCGCCGGCAACACGCTCGTCGTGCTGACGCAGGACGGCG GCGTGTACGGTTTCCGTCCGCGCTAA
Upstream 100 bases:
>100_bases ACGATGCATCCGCGCGCCAACTCGTGCAGTTCAAGCTGGACGCGCTCGGCGGCTGAGCGCCCACGCTTTCGTTTTACAAC TTAACTTTGCTTCGCTATCG
Downstream 100 bases:
>100_bases GCGCGCGGCGTTTTCGCGCGGCCGTGCGCTTCGCCGGCCGCGCGTCGCATTTTTTGCGCGTGCGCTTGGCGTCGGCCGGG CGGGCGCGGTCCGGCGGCTC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MNLLKRYAAPVACAAAVLVLAACSSTKDARRVPTPLTEFKPVLDVQQVWKASVGKGGRYSFSPVAVGDAVYVAGANGSVE KIDAKTGQEVWRTKIGSDLSAGVGSDGNLTAVGALKGGVFVLGPDGKQLWKTAVQGEIFSPPLVGNGLVIVRTIDGRVIA FAAQTGEQKWTYRNRAVPLNLRVSAGMTFAGDAAVLAGFPGGGLVALNLQTGEPFWQTPVSFPKGVTEVERINDVTGAPT LVGAETCAVTFQGQLGCFDANSGRPLWEKAFSSRSGVAQDDAVVVGGDDWSVVSAYDVATGKELWRNDKLKSRDVGVPYL LGRAVVLGDYKGFVHFLSRDDGAFVARMKTDGSAIAAAPVLAGNTLVVLTQDGGVYGFRPR
Sequences:
>Translated_381_residues MNLLKRYAAPVACAAAVLVLAACSSTKDARRVPTPLTEFKPVLDVQQVWKASVGKGGRYSFSPVAVGDAVYVAGANGSVE KIDAKTGQEVWRTKIGSDLSAGVGSDGNLTAVGALKGGVFVLGPDGKQLWKTAVQGEIFSPPLVGNGLVIVRTIDGRVIA FAAQTGEQKWTYRNRAVPLNLRVSAGMTFAGDAAVLAGFPGGGLVALNLQTGEPFWQTPVSFPKGVTEVERINDVTGAPT LVGAETCAVTFQGQLGCFDANSGRPLWEKAFSSRSGVAQDDAVVVGGDDWSVVSAYDVATGKELWRNDKLKSRDVGVPYL LGRAVVLGDYKGFVHFLSRDDGAFVARMKTDGSAIAAAPVLAGNTLVVLTQDGGVYGFRPR >Mature_381_residues MNLLKRYAAPVACAAAVLVLAACSSTKDARRVPTPLTEFKPVLDVQQVWKASVGKGGRYSFSPVAVGDAVYVAGANGSVE KIDAKTGQEVWRTKIGSDLSAGVGSDGNLTAVGALKGGVFVLGPDGKQLWKTAVQGEIFSPPLVGNGLVIVRTIDGRVIA FAAQTGEQKWTYRNRAVPLNLRVSAGMTFAGDAAVLAGFPGGGLVALNLQTGEPFWQTPVSFPKGVTEVERINDVTGAPT LVGAETCAVTFQGQLGCFDANSGRPLWEKAFSSRSGVAQDDAVVVGGDDWSVVSAYDVATGKELWRNDKLKSRDVGVPYL LGRAVVLGDYKGFVHFLSRDDGAFVARMKTDGSAIAAAPVLAGNTLVVLTQDGGVYGFRPR
Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To R.prowazekii RP232 [H]
Homologues:
Organism=Escherichia coli, GI1788859, Length=383, Percent_Identity=30.8093994778068, Blast_Score=166, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017687 - InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR011047 [H]
Pfam domain/function: PF01011 PQQ [H]
EC number: NA
Molecular weight: Translated: 39838; Mature: 39838
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLKRYAAPVACAAAVLVLAACSSTKDARRVPTPLTEFKPVLDVQQVWKASVGKGGRYS CCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE FSPVAVGDAVYVAGANGSVEKIDAKTGQEVWRTKIGSDLSAGVGSDGNLTAVGALKGGVF CCCEEECCEEEEECCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEE VLGPDGKQLWKTAVQGEIFSPPLVGNGLVIVRTIDGRVIAFAAQTGEQKWTYRNRAVPLN EECCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCEEECCCEEEEE LRVSAGMTFAGDAAVLAGFPGGGLVALNLQTGEPFWQTPVSFPKGVTEVERINDVTGAPT EEEECCCEECCCCEEEEECCCCCEEEEEEECCCCHHCCCCCCCCCCHHHHHHHCCCCCCE LVGAETCAVTFQGQLGCFDANSGRPLWEKAFSSRSGVAQDDAVVVGGDDWSVVSAYDVAT EEECCEEEEEEECCEEEEECCCCCHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCC GKELWRNDKLKSRDVGVPYLLGRAVVLGDYKGFVHFLSRDDGAFVARMKTDGSAIAAAPV CHHHHHCCCCCCCCCCCCHHHCCEEEEECCHHEEEEEECCCCEEEEEEECCCCEEEEEEE LAGNTLVVLTQDGGVYGFRPR ECCCEEEEEECCCCEECCCCC >Mature Secondary Structure MNLLKRYAAPVACAAAVLVLAACSSTKDARRVPTPLTEFKPVLDVQQVWKASVGKGGRYS CCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE FSPVAVGDAVYVAGANGSVEKIDAKTGQEVWRTKIGSDLSAGVGSDGNLTAVGALKGGVF CCCEEECCEEEEECCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEE VLGPDGKQLWKTAVQGEIFSPPLVGNGLVIVRTIDGRVIAFAAQTGEQKWTYRNRAVPLN EECCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCEEECCCEEEEE LRVSAGMTFAGDAAVLAGFPGGGLVALNLQTGEPFWQTPVSFPKGVTEVERINDVTGAPT EEEECCCEECCCCEEEEECCCCCEEEEEEECCCCHHCCCCCCCCCCHHHHHHHCCCCCCE LVGAETCAVTFQGQLGCFDANSGRPLWEKAFSSRSGVAQDDAVVVGGDDWSVVSAYDVAT EEECCEEEEEEECCEEEEECCCCCHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCC GKELWRNDKLKSRDVGVPYLLGRAVVLGDYKGFVHFLSRDDGAFVARMKTDGSAIAAAPV CHHHHHCCCCCCCCCCCCHHHCCEEEEECCHHEEEEEECCCCEEEEEEECCCCEEEEEEE LAGNTLVVLTQDGGVYGFRPR ECCCEEEEEECCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]