| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yeaH [C]
Identifier: 83721620
GI number: 83721620
Start: 2822139
End: 2823404
Strand: Reverse
Name: yeaH [C]
Synonym: BTH_I2468
Alternate gene names: 83721620
Gene position: 2823404-2822139 (Counterclockwise)
Preceding gene: 83718478
Following gene: 83720175
Centisome position: 74.12
GC content: 62.8
Gene sequence:
>1266_bases GTGCTTCATCAAATCATCGACCGCAGACTGGCCGGCAAGAACAAGAGCATTGCAAATCGCGAGCGCTTCCTGCGCCGCGT CAAGAACTACATTCGTCGTGCAGTGTCCGACGCGGTGCGCGATCGCAGCATCAAGGACATCCAGAGCACGCAGAGCATCA CGATTCCCCGCAAGGACATCGCGGAGCCGACGTTCCGGCACGGGCCGGGCGGCAAGCGCGAACTCGTGCATCCGGGCAAC GCCGACTACGTGCGCGGCGACAAGATCCCGCGTCCGCCAGGCGGCGCCGGGGGCGGAGGCAGCCAGGCGAGCAACGAAGG CGAGAGTCAGGACGACTTCGTGTTCGAGCTGTCCCGCGAGGAATTCATGCAGTACTTCTTCGACGATCTCGAACTGCCGC GCCTCGTCAAGACCCATCTGCTGACCGTGCCGAGCTGGAAGAACGTTCGCGCGGGCTGGGCGGCGGAGGGCACGCCGAAC AACATCGACGTCGTGCGTTCGCTCAGAAGCGCCCTCGGCCGTCGCATCGCGCTCGGCTCGCCGCTCGTCAACGAACTGCG CGAGCTCGAGGAAAAGCTCGCCGCGCTGAAGGAGGAGCAGGGCGATCACCGCGTCGAGATCGCGCAGCTCGAGGATGCGA TCCACCATCTGAAGGGCCGCATCTGGCGCATTCCGTTCATCGATCCGTTCGACCTGCGCTACGTGAATCGCGTGAAGCTG CCGCAGCCGTCGAGCCAGGCGGTGATGTTCTGTCTGATGGACGTGTCGGGATCGATGGACGAGCAGCGCAAGGATCTCGC GAAGCGCTTCTTCATCCTGCTGTACCTGTTCCTGAAGCGCAACTACGAGCGGATCGAAGTCGTGTTCATCCGCCATCACA CGCGCGCGGAGGAAGTCGACGAGGACACGTTCTTCCATTCGACCGAAAGCGGCGGCACGGTCGTGTCGAGCGCGCTCGAG CTGATGCGCAAGGTGATGGACGAGCGCTATTCGCCGACCGAATGGAACATCTACGGCGCGCAGGCGTCCGACGGCGACAA CTGGACCGACGATTCGCCGAAGTGCCGCAAGATCCTCGACGAGGACATCCTGACGAAGGTGCGCTACTTCGCGTACATCC AGGTGACGCCCGAGGAGCAGAACCTGTGGCTCGAATACGCGCAACTGGCGTTGTCGCAGCCGCATCTCGCGATGAAGAAA GTGGAATCGGCCGCCGACATTTACCCCGTGTTCCGGGAACTCTTTGAAAAGCACGTGGAAACCTGA
Upstream 100 bases:
>100_bases GGCCGCGCGCGGGCACCTTGAGAGACGCCGCCCGCATCGCGGCAGCCCCGCGTGCGCGGCGTGCGTCCCGGCGTATCGAC ATTCGAGCGGGAGACCGGGC
Downstream 100 bases:
>100_bases TGACGACACGCCACTTGCACAACGAAGCGCGCGGCTACGAGCCGCGGCGCAAGAGCGACGAAGCGTCGGGGCCCGCCGCG CGCGAGCGCGGGGCATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDIAEPTFRHGPGGKRELVHPGN ADYVRGDKIPRPPGGAGGGGSQASNEGESQDDFVFELSREEFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWAAEGTPN NIDVVRSLRSALGRRIALGSPLVNELRELEEKLAALKEEQGDHRVEIAQLEDAIHHLKGRIWRIPFIDPFDLRYVNRVKL PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSALE LMRKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILDEDILTKVRYFAYIQVTPEEQNLWLEYAQLALSQPHLAMKK VESAADIYPVFRELFEKHVET
Sequences:
>Translated_421_residues MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDIAEPTFRHGPGGKRELVHPGN ADYVRGDKIPRPPGGAGGGGSQASNEGESQDDFVFELSREEFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWAAEGTPN NIDVVRSLRSALGRRIALGSPLVNELRELEEKLAALKEEQGDHRVEIAQLEDAIHHLKGRIWRIPFIDPFDLRYVNRVKL PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSALE LMRKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILDEDILTKVRYFAYIQVTPEEQNLWLEYAQLALSQPHLAMKK VESAADIYPVFRELFEKHVET >Mature_421_residues MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDIAEPTFRHGPGGKRELVHPGN ADYVRGDKIPRPPGGAGGGGSQASNEGESQDDFVFELSREEFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWAAEGTPN NIDVVRSLRSALGRRIALGSPLVNELRELEEKLAALKEEQGDHRVEIAQLEDAIHHLKGRIWRIPFIDPFDLRYVNRVKL PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSALE LMRKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILDEDILTKVRYFAYIQVTPEEQNLWLEYAQLALSQPHLAMKK VESAADIYPVFRELFEKHVET
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=421, Percent_Identity=52.9691211401425, Blast_Score=442, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 48523; Mature: 48523
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDI CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHH AEPTFRHGPGGKRELVHPGNADYVRGDKIPRPPGGAGGGGSQASNEGESQDDFVFELSRE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH EFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWAAEGTPNNIDVVRSLRSALGRRIALGS HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC PLVNELRELEEKLAALKEEQGDHRVEIAQLEDAIHHLKGRIWRIPFIDPFDLRYVNRVKL HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHCCC PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVD CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCC EDTFFHSTESGGTVVSSALELMRKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILD CHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH EDILTKVRYFAYIQVTPEEQNLWLEYAQLALSQPHLAMKKVESAADIYPVFRELFEKHVE HHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC T C >Mature Secondary Structure MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDI CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHH AEPTFRHGPGGKRELVHPGNADYVRGDKIPRPPGGAGGGGSQASNEGESQDDFVFELSRE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH EFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWAAEGTPNNIDVVRSLRSALGRRIALGS HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC PLVNELRELEEKLAALKEEQGDHRVEIAQLEDAIHHLKGRIWRIPFIDPFDLRYVNRVKL HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHCCC PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVD CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCC EDTFFHSTESGGTVVSSALELMRKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILD CHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH EDILTKVRYFAYIQVTPEEQNLWLEYAQLALSQPHLAMKKVESAADIYPVFRELFEKHVE HHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC T C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA