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The map label for this gene is cyt [H]

Identifier: 83721542

GI number: 83721542

Start: 3589647

End: 3589982

Strand: Reverse

Name: cyt [H]

Synonym: BTH_I3145

Alternate gene names: 83721542

Gene position: 3589982-3589647 (Counterclockwise)

Preceding gene: 83720825

Following gene: 83718564

Centisome position: 94.25

GC content: 65.18

Gene sequence:

>336_bases
ATGATGGGCGGTGCGGTTATCGCGATTGCGGCGTTTGGTGGCGCGATGACGGCTGCGCCGGCATATGCGGATGTCGGCGA
TGGGCTGAGGGTCGCGCGCGGCAATGCGTGCATGGGCTGCCACGCGGTGGACCGGAAGCTAGTCGGACCATCTTTCCAGC
AGATTGCCGAGCGGTACAAGAACGACAAGCAGGCGGTGCCGAAGCTCGTGAAGAAGGTGAAGGACGGCGGCTCCGGCGTG
TGGGGCGCGATTCCGATGCCCGCGCACCCTCGAATGAGCGACGCGGACGTGCGCTCGGTCGTTCAATGGGTGCTGGCTGG
TGCGCCGTCGAAATAA

Upstream 100 bases:

>100_bases
CGCCGCTGCAAGCGCCCGCGCCGGTCTCCAATTCGACGAACGTGCATCCGGGCAATCCGAAGACGGGGACGCCGTGATGG
TTGCGACGCGCGTGAAACGG

Downstream 100 bases:

>100_bases
TCGGCGCAAACCTGTTGCCAAGCGCCGATGACGTGATGTATGATCGTCGGCTGTTGGTGAGGGGCGGTAGCTCAGCTGGG
AGAGCGTCGCGTTCGCAATG

Product: cytochrome c family protein

Products: NA

Alternate protein names: Cytochrome c-551; Cytochrome c552 [H]

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MMGGAVIAIAAFGGAMTAAPAYADVGDGLRVARGNACMGCHAVDRKLVGPSFQQIAERYKNDKQAVPKLVKKVKDGGSGV
WGAIPMPAHPRMSDADVRSVVQWVLAGAPSK

Sequences:

>Translated_111_residues
MMGGAVIAIAAFGGAMTAAPAYADVGDGLRVARGNACMGCHAVDRKLVGPSFQQIAERYKNDKQAVPKLVKKVKDGGSGV
WGAIPMPAHPRMSDADVRSVVQWVLAGAPSK
>Mature_111_residues
MMGGAVIAIAAFGGAMTAAPAYADVGDGLRVARGNACMGCHAVDRKLVGPSFQQIAERYKNDKQAVPKLVKKVKDGGSGV
WGAIPMPAHPRMSDADVRSVVQWVLAGAPSK

Specific function: Monoheme c-type cytochrome. Probable electron donor to membrane cytochrome oxidase and to periplasmic nitrite reductase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11476; Mature: 11476

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGGAVIAIAAFGGAMTAAPAYADVGDGLRVARGNACMGCHAVDRKLVGPSFQQIAERYK
CCCCCEEHHHHHCCHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCHHHHHHHHC
NDKQAVPKLVKKVKDGGSGVWGAIPMPAHPRMSDADVRSVVQWVLAGAPSK
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMGGAVIAIAAFGGAMTAAPAYADVGDGLRVARGNACMGCHAVDRKLVGPSFQQIAERYK
CCCCCEEHHHHHCCHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCHHHHHHHHC
NDKQAVPKLVKKVKDGGSGVWGAIPMPAHPRMSDADVRSVVQWVLAGAPSK
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746537; 12700255 [H]