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The map label for this gene is dadA [H]

Identifier: 83721412

GI number: 83721412

Start: 2408793

End: 2410097

Strand: Reverse

Name: dadA [H]

Synonym: BTH_I2134

Alternate gene names: 83721412

Gene position: 2410097-2408793 (Counterclockwise)

Preceding gene: 83719320

Following gene: 83719716

Centisome position: 63.27

GC content: 73.87

Gene sequence:

>1305_bases
ATGGATGTAATCGTCATCGGCGGCGGCATCGCCGGCATCGCCACCGCCTACCAGCTGCGCGCGGCCGGCCATCGCGTGTG
CGTCGTCGAACGTCACGCGACGGTCGCGCAAGGCGCGACCTACGGCCAGGGCGGCGCGCTGCTGCCGACGCCGCTCGACG
TCTGGTTCGGCCCGACCTTCATGCGCGAGCGGCGCGCGCAAAAGAGCGGCGTCGTCTACAAGCCCGGGTTCAACCGCGCG
CTGCGGCGCTTCACGCGCCGCCTCGACGCGCTGCGCGAGCCCACCGCGTTCGCCGCCCAATACGCGAAGCTGCGGCCGCT
CGTCGAGCTGTCGCGCGAGGCGATCGCCGACGTCGAGGCGCGCTTCAATCTCGAATTCGAACAGAAGAGCGGCGTGCTGC
ACGTCGTGCGCGACGCGGCCGAATGGGACGCGGTGCAGCCCGCGCTCGACCTGATGCGCGACCTCGGCCAGCCTTACGAG
ACGCTCACGCCCGATGCGTGCGCGGCGCTCGAGCCGTCGATGCCGGCCGACCCCGCGTTCGCGGCCGGCGTGCTGTTCGC
GCAGGAGCGCACCGCGAACTGCCCGCTCTTCGCGAAGCTCGTCAAGCAGGTGCTCGACGAGCGCGACGTGCAGTTCCGGC
TCGGCCGCGCGGTCGCCGCGATCCGCACCGACGCGAAGCGCGCGGCCGTCGAGCTCGCGCCCGACCCGGCCGACCCGCGC
GCGGCGAAATCGAAGGAGGTCGACGTGATCTCGGCCGACGCGGTCGTCGTCGCGGCGGGCACGGAAAGCCTCGCGCTCGT
CGAGCCGCTCGGCGTGCGCGCGCCGCTGCACCCGGTGCGCATCCACACGCTGACGGCGCCCCTCGCGTACGAGGAGCACG
CGCCGCACCTGAGCATCGTCGATTCGGTCAGGCGAATCGCGATCACGCGGCTCGGCCAGCGGCTGCGGATCGGCGGCGGC
GCCGTGCTGCAAAGCGCGCGGGATCTCGCGCGGCCGCTGCCCGAGCCGCTGTCCGAAGCGGCGCTCGCGCTCCTCGGCCA
AGCGACGCACGACTGGCTGCCCGGCGCGGCGAAGATCTCCGCCGCGCGCGCGTGGCAAGGCGCGAAGCTGCTGTCGCCGG
ACGGCCTGCCTGTCGTCGGGCCGACGGCCGATCCGCGCGTCTTCGTCAACTTCGGCCACGGCCCGGCGGGCTGGGGCCTC
GCGTTCGGGTCTGCTAAAGTGGTGGCAGATGACGTCGGCGGCGGCGCGCAGCGCGTGCCCGCCGACACGCTCGCCGCGCT
GCGCGCGGAGCGCTTTGCCACCTGA

Upstream 100 bases:

>100_bases
CTTCATTTGGCGCTATCATGCGCGCTTCACCGGGCCGCGCACGGCCTGCCACGCAAGATCCTCAATCGGGCCGGATGCGG
CGCCCGACATCGAATCGAAC

Downstream 100 bases:

>100_bases
CGCCGTTGCCGCTGCGCGCGGGCGGCGCATGATCGCGAGCCGCCCATGATCCTGCCTACCGATTCCCCCCCGCACCTTTC
GCTCGAGCTGCTCGACGCGC

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MDVIVIGGGIAGIATAYQLRAAGHRVCVVERHATVAQGATYGQGGALLPTPLDVWFGPTFMRERRAQKSGVVYKPGFNRA
LRRFTRRLDALREPTAFAAQYAKLRPLVELSREAIADVEARFNLEFEQKSGVLHVVRDAAEWDAVQPALDLMRDLGQPYE
TLTPDACAALEPSMPADPAFAAGVLFAQERTANCPLFAKLVKQVLDERDVQFRLGRAVAAIRTDAKRAAVELAPDPADPR
AAKSKEVDVISADAVVVAAGTESLALVEPLGVRAPLHPVRIHTLTAPLAYEEHAPHLSIVDSVRRIAITRLGQRLRIGGG
AVLQSARDLARPLPEPLSEAALALLGQATHDWLPGAAKISAARAWQGAKLLSPDGLPVVGPTADPRVFVNFGHGPAGWGL
AFGSAKVVADDVGGGAQRVPADTLAALRAERFAT

Sequences:

>Translated_434_residues
MDVIVIGGGIAGIATAYQLRAAGHRVCVVERHATVAQGATYGQGGALLPTPLDVWFGPTFMRERRAQKSGVVYKPGFNRA
LRRFTRRLDALREPTAFAAQYAKLRPLVELSREAIADVEARFNLEFEQKSGVLHVVRDAAEWDAVQPALDLMRDLGQPYE
TLTPDACAALEPSMPADPAFAAGVLFAQERTANCPLFAKLVKQVLDERDVQFRLGRAVAAIRTDAKRAAVELAPDPADPR
AAKSKEVDVISADAVVVAAGTESLALVEPLGVRAPLHPVRIHTLTAPLAYEEHAPHLSIVDSVRRIAITRLGQRLRIGGG
AVLQSARDLARPLPEPLSEAALALLGQATHDWLPGAAKISAARAWQGAKLLSPDGLPVVGPTADPRVFVNFGHGPAGWGL
AFGSAKVVADDVGGGAQRVPADTLAALRAERFAT
>Mature_434_residues
MDVIVIGGGIAGIATAYQLRAAGHRVCVVERHATVAQGATYGQGGALLPTPLDVWFGPTFMRERRAQKSGVVYKPGFNRA
LRRFTRRLDALREPTAFAAQYAKLRPLVELSREAIADVEARFNLEFEQKSGVLHVVRDAAEWDAVQPALDLMRDLGQPYE
TLTPDACAALEPSMPADPAFAAGVLFAQERTANCPLFAKLVKQVLDERDVQFRLGRAVAAIRTDAKRAAVELAPDPADPR
AAKSKEVDVISADAVVVAAGTESLALVEPLGVRAPLHPVRIHTLTAPLAYEEHAPHLSIVDSVRRIAITRLGQRLRIGGG
AVLQSARDLARPLPEPLSEAALALLGQATHDWLPGAAKISAARAWQGAKLLSPDGLPVVGPTADPRVFVNFGHGPAGWGL
AFGSAKVVADDVGGGAQRVPADTLAALRAERFAT

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=442, Percent_Identity=26.6968325791855, Blast_Score=172, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076
- InterPro:   IPR006036 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46164; Mature: 46164

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVIVIGGGIAGIATAYQLRAAGHRVCVVERHATVAQGATYGQGGALLPTPLDVWFGPTF
CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCCCCCCHHHHCCHHH
MRERRAQKSGVVYKPGFNRALRRFTRRLDALREPTAFAAQYAKLRPLVELSREAIADVEA
HHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RFNLEFEQKSGVLHVVRDAAEWDAVQPALDLMRDLGQPYETLTPDACAALEPSMPADPAF
HEEEEEHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHCCCCCCCCCHH
AAGVLFAQERTANCPLFAKLVKQVLDERDVQFRLGRAVAAIRTDAKRAAVELAPDPADPR
HHHHHEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
AAKSKEVDVISADAVVVAAGTESLALVEPLGVRAPLHPVRIHTLTAPLAYEEHAPHLSIV
CCCCCCCEEEECCEEEEEECCCCEEEECCCCCCCCCCCEEEEEEECCCCHHCCCCCHHHH
DSVRRIAITRLGQRLRIGGGAVLQSARDLARPLPEPLSEAALALLGQATHDWLPGAAKIS
HHHHHHHHHHHCHHEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
AARAWQGAKLLSPDGLPVVGPTADPRVFVNFGHGPAGWGLAFGSAKVVADDVGGGAQRVP
HHHHCCCCEEECCCCCEEECCCCCCEEEEECCCCCCCCCEECCCCEEEEECCCCCCCCCC
ADTLAALRAERFAT
HHHHHHHHHHHCCC
>Mature Secondary Structure
MDVIVIGGGIAGIATAYQLRAAGHRVCVVERHATVAQGATYGQGGALLPTPLDVWFGPTF
CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCCCCCCHHHHCCHHH
MRERRAQKSGVVYKPGFNRALRRFTRRLDALREPTAFAAQYAKLRPLVELSREAIADVEA
HHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RFNLEFEQKSGVLHVVRDAAEWDAVQPALDLMRDLGQPYETLTPDACAALEPSMPADPAF
HEEEEEHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHCCCCCCCCCHH
AAGVLFAQERTANCPLFAKLVKQVLDERDVQFRLGRAVAAIRTDAKRAAVELAPDPADPR
HHHHHEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
AAKSKEVDVISADAVVVAAGTESLALVEPLGVRAPLHPVRIHTLTAPLAYEEHAPHLSIV
CCCCCCCEEEECCEEEEEECCCCEEEECCCCCCCCCCCEEEEEEECCCCHHCCCCCHHHH
DSVRRIAITRLGQRLRIGGGAVLQSARDLARPLPEPLSEAALALLGQATHDWLPGAAKIS
HHHHHHHHHHHCHHEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
AARAWQGAKLLSPDGLPVVGPTADPRVFVNFGHGPAGWGLAFGSAKVVADDVGGGAQRVP
HHHHCCCCEEECCCCCEEECCCCCCEEEEECCCCCCCCCEECCCCEEEEECCCCCCCCCC
ADTLAALRAERFAT
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]