| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83721400
Identifier: 83721400
GI number: 83721400
Start: 1038184
End: 1039212
Strand: Direct
Name: 83721400
Synonym: BTH_I0913
Alternate gene names: NA
Gene position: 1038184-1039212 (Clockwise)
Preceding gene: 83719822
Following gene: 83721100
Centisome position: 27.25
GC content: 62.1
Gene sequence:
>1029_bases GTGACGTTCGACGGCGCGAAGGACGCGAACGACTTCCTGCTGTCCGGCGCGACGCAGGAGGATTTTCAACGTTGCATGGA CGCCGGCCGCACGTTCGACCCGGACGAGCTGAAGTCGATCTCGGAGTTCTGGAGCGGAGTCAAGGCGCTGTTCTACCCGG CTTCGGACGATGCCCACGATCCGTTCCTGTCGTTCTGCGGGCGCAGCGAGCCGTGGTTCGAGTTCCGCCAGGGCGAGATT ACGGTCTGGTCCGGATACAACGGTCACGGGAAGTCGCTGTTGCTCAACCAGGTGCTGCTCGGCCTGATGAACCAAGGTGA ACGAGCCTGTGTGTTCTCGGGCGAGATGACGCCGGTTCGGCAGGGCAAACGGATCGCGAAGCAGCTGGGCGGGCTGGATC GGCCGACGCCGGAATACCTCGACGCTATGGCCGAGTGGTTGCGTGATCGCATGTGGTCATTCGCCGTCGTCGGTACCGCG TCGATCGAACGCCTGCTGACCGTGTTCACCTACGCCTACAAGCGCTACGGCATTCGTCACTGCGTGATCGATAGCCTGAT GATGACCAACGTTCAGTCGGACGGGCCCGGTGCAATCACCGCGCAGAAGGACGCGATGCGGATGCTCGCGAACTGGGCTC GAGCAAATGGCACGCACGTGCATCTGGTAGCGCATCCCCGGAAGAGCCAAGACGAGAAGCACATTCCCGGGAAGCAGGAC GTTGCCGGTGCTGGCGTGATTACCGATGCGGCCGACAACGTGTTCAGCGTCTGGTCGGCGCAGAAGCACGAGGTCGAGTA CGGCGACGACGAGCCCGATGCCTACCTGCAGCTCCACAAGCAACGGAACGGCGACGTGCAACAGCGGAAGCTCGCGTTGT TCTTCAACCGAGCCGCTCAGCAGTTCAGCACCAGTTCGTACCGGCAGCCGCACGTCTATCTGCCGTTTCAGAAACCTGCA GCGTCGCCCAGTCGCCAGGCCTGTTCAGACTTTTCCCCATGTGAATCCCCTTCAAGGTGGTTTCGGTAG
Upstream 100 bases:
>100_bases ACAGTTCAGCGAGATTTTCCTCTGCTACGACAACGACGACGCGGGCAAGAAGGGGGCCCGTGAAGTCGCGAACCGTCTGG GCCTCGAGCGGTGCCGCTGC
Downstream 100 bases:
>100_bases TTGTTGCGACCTCGATTCTACGGCCGGGCGGGATTTGCTCATTGCCACACCCATCGGCCAGATCGGCCGCGACAACCAGC AGCACCAACGGAGAGCAGCA
Product: phage related protein
Products: NA
Alternate protein names: DNA Primase/Helicase; Phage Related Helicase; Replicative DNA Helicase; Bacteriophage Protein; TOPRIM Domain Protein
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTFDGAKDANDFLLSGATQEDFQRCMDAGRTFDPDELKSISEFWSGVKALFYPASDDAHDPFLSFCGRSEPWFEFRQGEI TVWSGYNGHGKSLLLNQVLLGLMNQGERACVFSGEMTPVRQGKRIAKQLGGLDRPTPEYLDAMAEWLRDRMWSFAVVGTA SIERLLTVFTYAYKRYGIRHCVIDSLMMTNVQSDGPGAITAQKDAMRMLANWARANGTHVHLVAHPRKSQDEKHIPGKQD VAGAGVITDAADNVFSVWSAQKHEVEYGDDEPDAYLQLHKQRNGDVQQRKLALFFNRAAQQFSTSSYRQPHVYLPFQKPA ASPSRQACSDFSPCESPSRWFR
Sequences:
>Translated_342_residues MTFDGAKDANDFLLSGATQEDFQRCMDAGRTFDPDELKSISEFWSGVKALFYPASDDAHDPFLSFCGRSEPWFEFRQGEI TVWSGYNGHGKSLLLNQVLLGLMNQGERACVFSGEMTPVRQGKRIAKQLGGLDRPTPEYLDAMAEWLRDRMWSFAVVGTA SIERLLTVFTYAYKRYGIRHCVIDSLMMTNVQSDGPGAITAQKDAMRMLANWARANGTHVHLVAHPRKSQDEKHIPGKQD VAGAGVITDAADNVFSVWSAQKHEVEYGDDEPDAYLQLHKQRNGDVQQRKLALFFNRAAQQFSTSSYRQPHVYLPFQKPA ASPSRQACSDFSPCESPSRWFR >Mature_341_residues TFDGAKDANDFLLSGATQEDFQRCMDAGRTFDPDELKSISEFWSGVKALFYPASDDAHDPFLSFCGRSEPWFEFRQGEIT VWSGYNGHGKSLLLNQVLLGLMNQGERACVFSGEMTPVRQGKRIAKQLGGLDRPTPEYLDAMAEWLRDRMWSFAVVGTAS IERLLTVFTYAYKRYGIRHCVIDSLMMTNVQSDGPGAITAQKDAMRMLANWARANGTHVHLVAHPRKSQDEKHIPGKQDV AGAGVITDAADNVFSVWSAQKHEVEYGDDEPDAYLQLHKQRNGDVQQRKLALFFNRAAQQFSTSSYRQPHVYLPFQKPAA SPSRQACSDFSPCESPSRWFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI39725942, Length=233, Percent_Identity=30.4721030042918, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI255304946, Length=164, Percent_Identity=31.0975609756098, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24583154, Length=233, Percent_Identity=26.6094420600858, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38509; Mature: 38377
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDGAKDANDFLLSGATQEDFQRCMDAGRTFDPDELKSISEFWSGVKALFYPASDDAHD CCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCC PFLSFCGRSEPWFEFRQGEITVWSGYNGHGKSLLLNQVLLGLMNQGERACVFSGEMTPVR HHHHHCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH QGKRIAKQLGGLDRPTPEYLDAMAEWLRDRMWSFAVVGTASIERLLTVFTYAYKRYGIRH HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH CVIDSLMMTNVQSDGPGAITAQKDAMRMLANWARANGTHVHLVAHPRKSQDEKHIPGKQD HHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC VAGAGVITDAADNVFSVWSAQKHEVEYGDDEPDAYLQLHKQRNGDVQQRKLALFFNRAAQ CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH QFSTSSYRQPHVYLPFQKPAASPSRQACSDFSPCESPSRWFR HHHCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCHHHCC >Mature Secondary Structure TFDGAKDANDFLLSGATQEDFQRCMDAGRTFDPDELKSISEFWSGVKALFYPASDDAHD CCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCC PFLSFCGRSEPWFEFRQGEITVWSGYNGHGKSLLLNQVLLGLMNQGERACVFSGEMTPVR HHHHHCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH QGKRIAKQLGGLDRPTPEYLDAMAEWLRDRMWSFAVVGTASIERLLTVFTYAYKRYGIRH HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH CVIDSLMMTNVQSDGPGAITAQKDAMRMLANWARANGTHVHLVAHPRKSQDEKHIPGKQD HHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC VAGAGVITDAADNVFSVWSAQKHEVEYGDDEPDAYLQLHKQRNGDVQQRKLALFFNRAAQ CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH QFSTSSYRQPHVYLPFQKPAASPSRQACSDFSPCESPSRWFR HHHCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA