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The map label for this gene is fabD [H]

Identifier: 83721395

GI number: 83721395

Start: 3212843

End: 3213781

Strand: Reverse

Name: fabD [H]

Synonym: BTH_I2797

Alternate gene names: 83721395

Gene position: 3213781-3212843 (Counterclockwise)

Preceding gene: 83720012

Following gene: 83720376

Centisome position: 84.37

GC content: 76.04

Gene sequence:

>939_bases
GTGACGATTGCGATTCTCTGTTCGGGGCAGGGCGGCCAGCGCGCCGGCATGTTCGAGTTGACGGCGGACGTGCCGGAAGC
CGAGCCGCTTTTCGCGCACGCGGCGACGCTGCTCGGCGCGGATCCGCGCGATTGGGTGCGCGACGCCGGCTGCGACGCGC
TGCACGGGAACTTCGCCGCGCAGCTCGTCTGCACGCTGCAGGCGCTGGCCGCGATGAGGCGGCTCGACGCGCTGCTGCCG
CGCCGGCGCTGCGTCGCGGGCTACAGCGTCGGCGAGGTTGCCGCGTGGAGCGTAGCGGGGCTCGTCGATGCGCACGACGC
GCTCGATCTCGTCGCGGCGCGTGCACGCGCGATGGACGCGGCGAGCGACGGCGACGCGCGGATGTTGTTCGTGCGCGGGC
TCGCGCGGGACGTCGTCGACGCGGCGTGCGCCGCGCACGGCGCCGCAGTCGCCATCGTCAACCCGGGCGACGCATACGTG
CTCGCGGGCCCGCAAGCGGCGCTCGATACGCTCGCGGCGGACGTGCGCGCGCGCGGCGCGATGCGCGTCGCGCCCGTCTG
CGTGCGCGTCGCTTCGCATACGCACTGGCTCGATGCCGCCGTGCCCCGGTTCCGCGCGGCGCTCGCCGGCGTGCGCGTCG
CACGCGCGCCGAGGCCCGGCACGCGGCTCGTGTCCGGCATCGACGGCGCGCCCGTGCTCGACGTTGCGGCGGGCGTCGAC
AAGCTCGCGCGCCAGATCGCCGAGCCGCTCGATTGGGCCGCGTGCGTCGCGGGCTGCGTCGAGGCGGGCGCGCGCGCGTT
CGTCGAGCTTGGCCCGGGCCGCGCGCTCGCGGAGATGGCGGCCGCCGCGTATCCCGCGCTGCCGGCGCGCAGCCTGGCCG
ATTTCCGCTCTTGGGACGGCGTGCGCGCGTGGCTTTCCCGCGTCGATCTCGACGCATAG

Upstream 100 bases:

>100_bases
ATCGCGCGTTCGTCGCGCGCCGGCTGAGCCCGGGCGGCGCGGCGGACCTGCTCGCGATGAGCCTCTTCGTCGCCGCGCTC
GACGGCGCAAAGGAGCGGCC

Downstream 100 bases:

>100_bases
CGGGCATCGCGTGCACGCGCGGCGACGCGCCGCGCGCACGCATCTCGACGAAACGGTTTGCAACGAAATCGGACGTCGCT
ACAATTGCCGCCCCATGACA

Product: acyl transferase domain-containing protein

Products: NA

Alternate protein names: MCT [H]

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTIAILCSGQGGQRAGMFELTADVPEAEPLFAHAATLLGADPRDWVRDAGCDALHGNFAAQLVCTLQALAAMRRLDALLP
RRRCVAGYSVGEVAAWSVAGLVDAHDALDLVAARARAMDAASDGDARMLFVRGLARDVVDAACAAHGAAVAIVNPGDAYV
LAGPQAALDTLAADVRARGAMRVAPVCVRVASHTHWLDAAVPRFRAALAGVRVARAPRPGTRLVSGIDGAPVLDVAAGVD
KLARQIAEPLDWAACVAGCVEAGARAFVELGPGRALAEMAAAAYPALPARSLADFRSWDGVRAWLSRVDLDA

Sequences:

>Translated_312_residues
MTIAILCSGQGGQRAGMFELTADVPEAEPLFAHAATLLGADPRDWVRDAGCDALHGNFAAQLVCTLQALAAMRRLDALLP
RRRCVAGYSVGEVAAWSVAGLVDAHDALDLVAARARAMDAASDGDARMLFVRGLARDVVDAACAAHGAAVAIVNPGDAYV
LAGPQAALDTLAADVRARGAMRVAPVCVRVASHTHWLDAAVPRFRAALAGVRVARAPRPGTRLVSGIDGAPVLDVAAGVD
KLARQIAEPLDWAACVAGCVEAGARAFVELGPGRALAEMAAAAYPALPARSLADFRSWDGVRAWLSRVDLDA
>Mature_311_residues
TIAILCSGQGGQRAGMFELTADVPEAEPLFAHAATLLGADPRDWVRDAGCDALHGNFAAQLVCTLQALAAMRRLDALLPR
RRCVAGYSVGEVAAWSVAGLVDAHDALDLVAARARAMDAASDGDARMLFVRGLARDVVDAACAAHGAAVAIVNPGDAYVL
AGPQAALDTLAADVRARGAMRVAPVCVRVASHTHWLDAAVPRFRAALAGVRVARAPRPGTRLVSGIDGAPVLDVAAGVDK
LARQIAEPLDWAACVAGCVEAGARAFVELGPGRALAEMAAAAYPALPARSLADFRSWDGVRAWLSRVDLDA

Specific function: Fatty acid biosynthesis. [C]

COG id: COG0331

COG function: function code I; (acyl-carrier-protein) S-malonyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fabD family [H]

Homologues:

Organism=Homo sapiens, GI51243059, Length=330, Percent_Identity=28.1818181818182, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI1787334, Length=300, Percent_Identity=29, Blast_Score=81, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI71984332, Length=297, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24665753, Length=300, Percent_Identity=28, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001227
- InterPro:   IPR014043
- InterPro:   IPR016035
- InterPro:   IPR004410
- InterPro:   IPR016036 [H]

Pfam domain/function: PF00698 Acyl_transf_1 [H]

EC number: =2.3.1.39 [H]

Molecular weight: Translated: 32250; Mature: 32119

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAILCSGQGGQRAGMFELTADVPEAEPLFAHAATLLGADPRDWVRDAGCDALHGNFAA
CEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH
QLVCTLQALAAMRRLDALLPRRRCVAGYSVGEVAAWSVAGLVDAHDALDLVAARARAMDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASDGDARMLFVRGLARDVVDAACAAHGAAVAIVNPGDAYVLAGPQAALDTLAADVRARGA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHCCC
MRVAPVCVRVASHTHWLDAAVPRFRAALAGVRVARAPRPGTRLVSGIDGAPVLDVAAGVD
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHH
KLARQIAEPLDWAACVAGCVEAGARAFVELGPGRALAEMAAAAYPALPARSLADFRSWDG
HHHHHHHCCCHHHHHHHHHHHHHHHHEEHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCHH
VRAWLSRVDLDA
HHHHHHHHCCCC
>Mature Secondary Structure 
TIAILCSGQGGQRAGMFELTADVPEAEPLFAHAATLLGADPRDWVRDAGCDALHGNFAA
EEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH
QLVCTLQALAAMRRLDALLPRRRCVAGYSVGEVAAWSVAGLVDAHDALDLVAARARAMDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASDGDARMLFVRGLARDVVDAACAAHGAAVAIVNPGDAYVLAGPQAALDTLAADVRARGA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHCCC
MRVAPVCVRVASHTHWLDAAVPRFRAALAGVRVARAPRPGTRLVSGIDGAPVLDVAAGVD
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHH
KLARQIAEPLDWAACVAGCVEAGARAFVELGPGRALAEMAAAAYPALPARSLADFRSWDG
HHHHHHHCCCHHHHHHHHHHHHHHHHEEHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCHH
VRAWLSRVDLDA
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]