| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is mchE [H]
Identifier: 83721340
GI number: 83721340
Start: 3388542
End: 3390158
Strand: Direct
Name: mchE [H]
Synonym: BTH_I2948
Alternate gene names: 83721340
Gene position: 3388542-3390158 (Clockwise)
Preceding gene: 83719556
Following gene: 83719024
Centisome position: 88.96
GC content: 65.24
Gene sequence:
>1617_bases GTGTCCGATAAGTTTCGATCCGGTGCCGACGCGTTTCGAACGATCCGTATCCGTCGCCGCGATCGCTGCAATCGTCATCG GCCTCAAGCCGCGCGCGATGTAATGACGAAGCGGTCGGGCGCGGCCAGGTCTCGATCGCGAAAGAGTCGTGACGACATCG ACAAATCGCTCCTTGCGACAACCGGCTCGACGGAATGCCGAAACCGGGCGGCGCAGCTGATGCGTCTCCTGCAAGACGAA CGCAAACACGACGATGATCGAGCGAACCGACGGCGTCGCCACGCAATGCCCGAACGCGAAACGTCAAACCACAGCCGCGA TTCCAACGCTACTTTCGGCAGTCCATCCATGACGCCCAACACTCCACTCTTTCGAACAGCCGCCCAGGAAGCGCAGCGCA CGCAAACGCTCGGCGAGATCGTGTTGATTCGCCCCGTGTCGTTCGCCGTGCTCGCGAGCGCGGCCGCGAGCATGGCGCTC GGCGTGATCCTGCTCTTCACGTTCGGCACCTATACGCGGCGCACGACGGTCGACGGCGTGCTCACGCCGGACACGGGCCT CGTCAAGGTCTACGCGCAGCAGACGGGCGTCGTGCTGAAGAAGAACGTCGTCGAGGGGCAGCATGTCACGCGCGGGCAGA TGCTATACACGGTGTCGACCGACCTGCAGAGCGCGGCCGCGGGGCAGACGCAGGCGGCGCTCATCGATCAGGCACAGCAA CGCAAGGCATCGCTGCAACAGGAACTCGACAAGACCAAGCGACTGCAACAGGATGAGCGCGACACGCTGCAATCGAAGAT CGCGAGCTTGCGCGCGGAGCTCGCGGGCATCGACGATCAGATCGCCGCGCAACGCACGCGCACGTCGCTCGCGGCCGACG CCGCGTCGCGCTATGCAGGCTTGCTCGCTCAGGACTACATCTCGAAAGATCAGGCGCAGCAGCGCGAGGCCGATCTGCTC GATCAACGCTCGAAGCTGAACAGCCTGATGCGCGACCGCGCGAGCACGGCGCAGACTTTGAAGGAAGCGCTCAACGACCT GTCGGGCCTGTCGCTCAAACAGCAGAACCAGTTGTCGCAGATCGACCGCAGCGTGATCGACGTCGATCGCACGCTGATCG AGAGCGAGGCGAAGCGCGAGTTCGTCGTCACCGCGCCGGAAACGGGCACCGCGACCGCGGTGATCGCCGAGCCGGGCCAG ACAGCCGACACGTCGCACCCGCTCGCGAGCATCGTGCCGACGGACGCGCACTGGCAGGCGTATCTGTTCGTGCCGAGCGC GGCGGTCGGCTTCGTACACGTCGGCGATCGCGTGCTCGTGCGCTATCAGGCGTATCCGTACCAGAAGTTCGGCCAGTACG AAGCGAGCGTCGTGTCGATCGCGCGCACCGCGCTGTCGGCCGCCGAGCTCGCGACGAGCGGCGGCCCCGCCGCGCAAACA TCGAGCGGCACGTACTACCGGATCACGGTCGCGCTGAAATCGCAAAGCGTGACGGCGTACGGCAAGGCGCAACCGTTGCA GGCCGGCATGGCGCTGCAAGCCGACATCCTGCAGGAGCGCCGCCGCCTGTACGAATGGGTGCTCGAACCTCTTTACAGCC TGACGGGCAAACTCTGA
Upstream 100 bases:
>100_bases CGTTTCGATTGACCGATTCTCTACTGATTGGAATGTCAAGTAGCGAAAAACACTTCAAATATCGTTAAAACGTAGTCCAA CGCGCTTTCCCGTTTCATCG
Downstream 100 bases:
>100_bases CGCGGTCCAAGCCTATGTCACTTCTCGATCGTCTCTCGTTCGGCATCCGCAGCAAGCTGCCGATGATCTTGCAGACCGAA GCCGCCGAATGCGGCCTCGC
Product: secretion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MSDKFRSGADAFRTIRIRRRDRCNRHRPQAARDVMTKRSGAARSRSRKSRDDIDKSLLATTGSTECRNRAAQLMRLLQDE RKHDDDRANRRRRHAMPERETSNHSRDSNATFGSPSMTPNTPLFRTAAQEAQRTQTLGEIVLIRPVSFAVLASAAASMAL GVILLFTFGTYTRRTTVDGVLTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQMLYTVSTDLQSAAAGQTQAALIDQAQQ RKASLQQELDKTKRLQQDERDTLQSKIASLRAELAGIDDQIAAQRTRTSLAADAASRYAGLLAQDYISKDQAQQREADLL DQRSKLNSLMRDRASTAQTLKEALNDLSGLSLKQQNQLSQIDRSVIDVDRTLIESEAKREFVVTAPETGTATAVIAEPGQ TADTSHPLASIVPTDAHWQAYLFVPSAAVGFVHVGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQT SSGTYYRITVALKSQSVTAYGKAQPLQAGMALQADILQERRRLYEWVLEPLYSLTGKL
Sequences:
>Translated_538_residues MSDKFRSGADAFRTIRIRRRDRCNRHRPQAARDVMTKRSGAARSRSRKSRDDIDKSLLATTGSTECRNRAAQLMRLLQDE RKHDDDRANRRRRHAMPERETSNHSRDSNATFGSPSMTPNTPLFRTAAQEAQRTQTLGEIVLIRPVSFAVLASAAASMAL GVILLFTFGTYTRRTTVDGVLTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQMLYTVSTDLQSAAAGQTQAALIDQAQQ RKASLQQELDKTKRLQQDERDTLQSKIASLRAELAGIDDQIAAQRTRTSLAADAASRYAGLLAQDYISKDQAQQREADLL DQRSKLNSLMRDRASTAQTLKEALNDLSGLSLKQQNQLSQIDRSVIDVDRTLIESEAKREFVVTAPETGTATAVIAEPGQ TADTSHPLASIVPTDAHWQAYLFVPSAAVGFVHVGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQT SSGTYYRITVALKSQSVTAYGKAQPLQAGMALQADILQERRRLYEWVLEPLYSLTGKL >Mature_537_residues SDKFRSGADAFRTIRIRRRDRCNRHRPQAARDVMTKRSGAARSRSRKSRDDIDKSLLATTGSTECRNRAAQLMRLLQDER KHDDDRANRRRRHAMPERETSNHSRDSNATFGSPSMTPNTPLFRTAAQEAQRTQTLGEIVLIRPVSFAVLASAAASMALG VILLFTFGTYTRRTTVDGVLTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQMLYTVSTDLQSAAAGQTQAALIDQAQQR KASLQQELDKTKRLQQDERDTLQSKIASLRAELAGIDDQIAAQRTRTSLAADAASRYAGLLAQDYISKDQAQQREADLLD QRSKLNSLMRDRASTAQTLKEALNDLSGLSLKQQNQLSQIDRSVIDVDRTLIESEAKREFVVTAPETGTATAVIAEPGQT ADTSHPLASIVPTDAHWQAYLFVPSAAVGFVHVGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQTS SGTYYRITVALKSQSVTAYGKAQPLQAGMALQADILQERRRLYEWVLEPLYSLTGKL
Specific function: Probably involved, in conjunction with mchF, in the secretion of microcin H47 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR011053 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 59287; Mature: 59156
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKFRSGADAFRTIRIRRRDRCNRHRPQAARDVMTKRSGAARSRSRKSRDDIDKSLLAT CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHC TGSTECRNRAAQLMRLLQDERKHDDDRANRRRRHAMPERETSNHSRDSNATFGSPSMTPN CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC TPLFRTAAQEAQRTQTLGEIVLIRPVSFAVLASAAASMALGVILLFTFGTYTRRTTVDGV CCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCE LTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQMLYTVSTDLQSAAAGQTQAALIDQAQQ ECCCCCEEEEEEHHCCEEHHHHCCCCCCCCCCCEEEEEECCHHHHHCCCHHHHHHHHHHH RKASLQQELDKTKRLQQDERDTLQSKIASLRAELAGIDDQIAAQRTRTSLAADAASRYAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LLAQDYISKDQAQQREADLLDQRSKLNSLMRDRASTAQTLKEALNDLSGLSLKQQNQLSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IDRSVIDVDRTLIESEAKREFVVTAPETGTATAVIAEPGQTADTSHPLASIVPTDAHWQA HHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCEE YLFVPSAAVGFVHVGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQT EEEECCCHHHEEEECCEEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC SSGTYYRITVALKSQSVTAYGKAQPLQAGMALQADILQERRRLYEWVLEPLYSLTGKL CCCCEEEEEEEEECCCEEECCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDKFRSGADAFRTIRIRRRDRCNRHRPQAARDVMTKRSGAARSRSRKSRDDIDKSLLAT CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHC TGSTECRNRAAQLMRLLQDERKHDDDRANRRRRHAMPERETSNHSRDSNATFGSPSMTPN CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC TPLFRTAAQEAQRTQTLGEIVLIRPVSFAVLASAAASMALGVILLFTFGTYTRRTTVDGV CCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCE LTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQMLYTVSTDLQSAAAGQTQAALIDQAQQ ECCCCCEEEEEEHHCCEEHHHHCCCCCCCCCCCEEEEEECCHHHHHCCCHHHHHHHHHHH RKASLQQELDKTKRLQQDERDTLQSKIASLRAELAGIDDQIAAQRTRTSLAADAASRYAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LLAQDYISKDQAQQREADLLDQRSKLNSLMRDRASTAQTLKEALNDLSGLSLKQQNQLSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IDRSVIDVDRTLIESEAKREFVVTAPETGTATAVIAEPGQTADTSHPLASIVPTDAHWQA HHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCEE YLFVPSAAVGFVHVGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQT EEEECCCHHHEEEECCEEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC SSGTYYRITVALKSQSVTAYGKAQPLQAGMALQADILQERRRLYEWVLEPLYSLTGKL CCCCEEEEEEEEECCCEEECCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11181394 [H]