| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yddG [C]
Identifier: 83721305
GI number: 83721305
Start: 1094987
End: 1096195
Strand: Direct
Name: yddG [C]
Synonym: BTH_I0969
Alternate gene names: 83721305
Gene position: 1094987-1096195 (Clockwise)
Preceding gene: 83718567
Following gene: 83720278
Centisome position: 28.75
GC content: 72.46
Gene sequence:
>1209_bases GTGCGGGGCCCGCGCGCGGATGCGTCGGCGCGCGGGCATCGTCAGGCGGCGGGCATCGTCAGGCGGCGAGCGTCGTCAGG CGGCGAGCGTCGCCGGCGCAATGGCGGCGCGGCGATATGCGATGGGCTGCGCGGCGGGCGTGCGGCACGCTCGCCGTTCG ACGTGAGATCCGCCACGGCGCGCATCGCGGCTCGCAACGGATTCGGCACAAATACCGCTTATGCGGCGATTCGAAGCTCG TTAGAATCGAGCGCTTTCACTACTCGCTTCAGCGCCATGGCTTTCGCCGCCGAAACCTCTTGTGCCGCACGACGCGGCGC GCTGTACGTCGCGTTGTCGGCAGCCGCGTTCGGCGCGATGGCGATCTTCGGCCGTTACGCCTACGCGGGCGGCGCCGACG TGCTCGGCCTTTTGATCGTCCGCTTCTCGATCGCGGGCGCGCTGCTCGTCGCCGTCGCGCGGCGGCGGCGCGTGCGCTGG CCGCGCGGCCGCGCGCTCGCCGCGATCATCGGCATGGGCGCGCTCGGCTACGTCGGCCAGTCGCTGTGCTATTTCAGTGC GCTGCAACATGCGCAGGCGAGCCTCGTCGCGCTGCTGCTCTATCTGTATCCGGCGTTCGTCACGCTGCTCGCCGCCTGGT GGCTCGGCGAGCGGCTCACGCGCGCGAAGGCGGTCGCGCTCGCGCTGTGCGTCGCAGGATCGGCGCTAATGGTGGGCGGC GGCCGCGGCGAGCCGCTCGGCATCGCGCTCGCGCTCGGCGCGGCGGTCGTCTATTCGCTGTACATCGTCGTCGGCGCGAA GGCGGCGCGCGGCGTCGATCCGCTCGCGACCGTCGCGATCATTTGTTGCGCCGCGGCCGCGACGCTCGTCGTGCTCGCAC TCGCACGCGCGACGGTGTTCGATGCGCCTCCGCATTGGCCGCGCGCGGCGTCGGGCTGGGCCGCGCTCGTCGCGATCGCG CTCGTGTCGACCGTCGCCGCCATGCTCGCGTTCTTCGCCGGTCTCGCGCGGCTTGGCGCGGCGCGCACGTCGATGCTGTC GACACTGGAGCCCGTCGTGACGGTGGCGCTTGCCGCCGCGTTGTTCGGCGAGACGCTGACGCCGCTGCAATGGATGGGCG GCGTCGCGATCCTCGTGGCGGTGCTGTGGCTCGTGCGCGCGGGCAGTTCGTCCGACCGCGCGGAGCCGACGACGATCGCG AGCGCGTAA
Upstream 100 bases:
>100_bases AAAGCGCGCCGACGCGATGGCGCAACGAAGCGGTGATGCAACGAAGCGGCGCGCGGACAGCCGGGGGCGTGAGGCGTCGG CTTAGGAGCCGCGTGCGCCT
Downstream 100 bases:
>100_bases GGCGAGCGGGCAAGCAGCGAGGGTGTCGGTTTGGATAGGGGCCGCTGAGGCGGCGGGCGGACTTCGCCGATCGGCATGCA GAATGCGAATGCGCGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MRGPRADASARGHRQAAGIVRRRASSGGERRRRNGGAAICDGLRGGRAARSPFDVRSATARIAARNGFGTNTAYAAIRSS LESSAFTTRFSAMAFAAETSCAARRGALYVALSAAAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRVRW PRGRALAAIIGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERLTRAKAVALALCVAGSALMVGG GRGEPLGIALALGAAVVYSLYIVVGAKAARGVDPLATVAIICCAAAATLVVLALARATVFDAPPHWPRAASGWAALVAIA LVSTVAAMLAFFAGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWMGGVAILVAVLWLVRAGSSSDRAEPTTIA SA
Sequences:
>Translated_402_residues MRGPRADASARGHRQAAGIVRRRASSGGERRRRNGGAAICDGLRGGRAARSPFDVRSATARIAARNGFGTNTAYAAIRSS LESSAFTTRFSAMAFAAETSCAARRGALYVALSAAAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRVRW PRGRALAAIIGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERLTRAKAVALALCVAGSALMVGG GRGEPLGIALALGAAVVYSLYIVVGAKAARGVDPLATVAIICCAAAATLVVLALARATVFDAPPHWPRAASGWAALVAIA LVSTVAAMLAFFAGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWMGGVAILVAVLWLVRAGSSSDRAEPTTIA SA >Mature_402_residues MRGPRADASARGHRQAAGIVRRRASSGGERRRRNGGAAICDGLRGGRAARSPFDVRSATARIAARNGFGTNTAYAAIRSS LESSAFTTRFSAMAFAAETSCAARRGALYVALSAAAFGAMAIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRVRW PRGRALAAIIGMGALGYVGQSLCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERLTRAKAVALALCVAGSALMVGG GRGEPLGIALALGAAVVYSLYIVVGAKAARGVDPLATVAIICCAAAATLVVLALARATVFDAPPHWPRAASGWAALVAIA LVSTVAAMLAFFAGLARLGAARTSMLSTLEPVVTVALAAALFGETLTPLQWMGGVAILVAVLWLVRAGSSSDRAEPTTIA SA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41262; Mature: 41262
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGPRADASARGHRQAAGIVRRRASSGGERRRRNGGAAICDGLRGGRAARSPFDVRSATA CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHH RIAARNGFGTNTAYAAIRSSLESSAFTTRFSAMAFAAETSCAARRGALYVALSAAAFGAM HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHH AIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRVRWPRGRALAAIIGMGALGYVGQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SLCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERLTRAKAVALALCVAGSALMVGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC GRGEPLGIALALGAAVVYSLYIVVGAKAARGVDPLATVAIICCAAAATLVVLALARATVF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC DAPPHWPRAASGWAALVAIALVSTVAAMLAFFAGLARLGAARTSMLSTLEPVVTVALAAA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGETLTPLQWMGGVAILVAVLWLVRAGSSSDRAEPTTIASA HHHCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRGPRADASARGHRQAAGIVRRRASSGGERRRRNGGAAICDGLRGGRAARSPFDVRSATA CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHH RIAARNGFGTNTAYAAIRSSLESSAFTTRFSAMAFAAETSCAARRGALYVALSAAAFGAM HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHH AIFGRYAYAGGADVLGLLIVRFSIAGALLVAVARRRRVRWPRGRALAAIIGMGALGYVGQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SLCYFSALQHAQASLVALLLYLYPAFVTLLAAWWLGERLTRAKAVALALCVAGSALMVGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC GRGEPLGIALALGAAVVYSLYIVVGAKAARGVDPLATVAIICCAAAATLVVLALARATVF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC DAPPHWPRAASGWAALVAIALVSTVAAMLAFFAGLARLGAARTSMLSTLEPVVTVALAAA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGETLTPLQWMGGVAILVAVLWLVRAGSSSDRAEPTTIASA HHHCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA