| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is ygcG [H]
Identifier: 83721304
GI number: 83721304
Start: 319756
End: 320610
Strand: Direct
Name: ygcG [H]
Synonym: BTH_I0285
Alternate gene names: 83721304
Gene position: 319756-320610 (Clockwise)
Preceding gene: 83720599
Following gene: 83721598
Centisome position: 8.39
GC content: 71.7
Gene sequence:
>855_bases TTGAAGAATCTCTTGCGCGCGGCGTGCGTCGCGATCCTCACGTTCCTGTCGCTCGGCGGCGGCGTCTGCCGCGCCGAGCA GCCGGTGCCGCCGCTCGCCGCGCGCGTGACGGACGAGACGGGCACGCTGACGGCCGCCGAGCGCGCGACGCTCGAACAGT CGCTGAAGGATTTCGAAGCGCGCAAGGGCAGCCAGATCGCGGTGCTGATCGTGCCGACGACGCAGCCCGAGACGATCGAG CAGTATTCGATCCGCGTCGTCGAGCAGTGGAAGCTCGGCCGCGCGAACGTCGACGACGGCGCGCTTCTCATCGTCGCGAA GAACGATCGCACATTGCGCATCGAGGTGGGCTACGGGCTCGAAGGCGTGCTGACCGACGCGACGAGCCATCGAATCATCG ACGAGATCATCGTGCCGGGCTTTCGACGCGGCGATTTCTACGGCGGCATCTCGGCGGGCGTCGGCAGCATGATGCGCGTG ATCGAAGGCGAGCCGCTGCCGCCGCCTCGCGCGCGACGCGGCGACGAAGGCGGGCTCGGCCGCCTGCTGCCGTTGCTGTT CGTGATGACGATCGTCGCGGGGGGCGTGCTGCGCGCGATACTCGGCCGGCTCGCGGGTTCGGTCGTCACGGGCGGCGTGG TCGGCTTCGTCGCGTGGATGCTGTCCGGCGCGCTCTTTGTCGCATTCGCTGCGGCGGCGGTCGCGCTCTTCTTCACGCTG CTCGGCGGCGGGGTGGGCGCGCGCGTCGGCGGGCCGTTCATCGGCGGGCGCGGCGGCGGCTGGGGCGGCGGGAGCGATGG CTTTCGCGGCGGCGGAGGCGGGTTCGGCGGCGGCGGCGCGTCCGGGAGGTGGTGA
Upstream 100 bases:
>100_bases AACCGAACTTCTCGGTCGCGAACGAAGCCGAGATCTCGAAGCCGCCGCGCGTCGACTTCGGGGCCAAGCCGGCGCCCGCG CCGGCCGCCGGAGCGTCGAA
Downstream 100 bases:
>100_bases TGGATATTGCGCGATTCGCGAGGCACCTGTTGATGACGCGCTGGCGCGTCGGCACGGCGTTTCCGAAGCGCACGCTCGGC AAGATCGAGCGCGCGATCAA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKNLLRAACVAILTFLSLGGGVCRAEQPVPPLAARVTDETGTLTAAERATLEQSLKDFEARKGSQIAVLIVPTTQPETIE QYSIRVVEQWKLGRANVDDGALLIVAKNDRTLRIEVGYGLEGVLTDATSHRIIDEIIVPGFRRGDFYGGISAGVGSMMRV IEGEPLPPPRARRGDEGGLGRLLPLLFVMTIVAGGVLRAILGRLAGSVVTGGVVGFVAWMLSGALFVAFAAAAVALFFTL LGGGVGARVGGPFIGGRGGGWGGGSDGFRGGGGGFGGGGASGRW
Sequences:
>Translated_284_residues MKNLLRAACVAILTFLSLGGGVCRAEQPVPPLAARVTDETGTLTAAERATLEQSLKDFEARKGSQIAVLIVPTTQPETIE QYSIRVVEQWKLGRANVDDGALLIVAKNDRTLRIEVGYGLEGVLTDATSHRIIDEIIVPGFRRGDFYGGISAGVGSMMRV IEGEPLPPPRARRGDEGGLGRLLPLLFVMTIVAGGVLRAILGRLAGSVVTGGVVGFVAWMLSGALFVAFAAAAVALFFTL LGGGVGARVGGPFIGGRGGGWGGGSDGFRGGGGGFGGGGASGRW >Mature_284_residues MKNLLRAACVAILTFLSLGGGVCRAEQPVPPLAARVTDETGTLTAAERATLEQSLKDFEARKGSQIAVLIVPTTQPETIE QYSIRVVEQWKLGRANVDDGALLIVAKNDRTLRIEVGYGLEGVLTDATSHRIIDEIIVPGFRRGDFYGGISAGVGSMMRV IEGEPLPPPRARRGDEGGLGRLLPLLFVMTIVAGGVLRAILGRLAGSVVTGGVVGFVAWMLSGALFVAFAAAAVALFFTL LGGGVGARVGGPFIGGRGGGWGGGSDGFRGGGGGFGGGGASGRW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=158, Percent_Identity=40.5063291139241, Blast_Score=120, Evalue=8e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 29203; Mature: 29203
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00879 ODR_DC_2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLRAACVAILTFLSLGGGVCRAEQPVPPLAARVTDETGTLTAAERATLEQSLKDFEA CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH RKGSQIAVLIVPTTQPETIEQYSIRVVEQWKLGRANVDDGALLIVAKNDRTLRIEVGYGL CCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCC EGVLTDATSHRIIDEIIVPGFRRGDFYGGISAGVGSMMRVIEGEPLPPPRARRGDEGGLG CEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH RLLPLLFVMTIVAGGVLRAILGRLAGSVVTGGVVGFVAWMLSGALFVAFAAAAVALFFTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGGVGARVGGPFIGGRGGGWGGGSDGFRGGGGGFGGGGASGRW HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKNLLRAACVAILTFLSLGGGVCRAEQPVPPLAARVTDETGTLTAAERATLEQSLKDFEA CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH RKGSQIAVLIVPTTQPETIEQYSIRVVEQWKLGRANVDDGALLIVAKNDRTLRIEVGYGL CCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCC EGVLTDATSHRIIDEIIVPGFRRGDFYGGISAGVGSMMRVIEGEPLPPPRARRGDEGGLG CEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH RLLPLLFVMTIVAGGVLRAILGRLAGSVVTGGVVGFVAWMLSGALFVAFAAAAVALFFTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGGVGARVGGPFIGGRGGGWGGGSDGFRGGGGGFGGGGASGRW HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]