| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is nsrR [H]
Identifier: 83721287
GI number: 83721287
Start: 2479512
End: 2480054
Strand: Direct
Name: nsrR [H]
Synonym: BTH_I2204
Alternate gene names: 83721287
Gene position: 2479512-2480054 (Clockwise)
Preceding gene: 83719603
Following gene: 83719137
Centisome position: 65.09
GC content: 63.72
Gene sequence:
>543_bases ATGTTTGCGCGAGCGCCGGTCGCACTGACACAACACTACTTCGTAATGAGACTAACCGACTACACCGACTACTCTTTGCG CGTCATGTTGTTCCTCGCAGTCCGAGGCGAGGGCTTGTCGACGATCCAGGAGATCTCGGATGCCTACGGCATCTCGAAGA ACCATTTGATGAAAGTGGTGCAGCAGCTCGGCGAGCTCGGTTGGATCGAGACGGTGCGCGGCCGCAACGGCGGCTTGCGC CTGAACGCCCAGTCCGTGACGCTGACCGTCGGCCAAGTCGTACGCAAGACCGAAAACGATTTCGCGCTCGTCGGCTGCTT CACGGGCGAATCCGAAGCGCATCGCAACTGCGTGATCCAGTCCGCGTGCCGGCTCAAGGGCGTGTTCGCGGCGGCCCGCG AAGCGTTCTTCGCGGAGCTCGACAAGCACACGATCGGCGAGCTTGCGCAGCCGGCGTCGCAACTCTCGATGCTGCTCGGC CTCACGCCGGTGCGGATCGTGCCCGCGGCCGATGTCCGCTCGGCCGTGACCGTCGTCGGCTGA
Upstream 100 bases:
>100_bases CGATTTTGTCGCACAATAATAAACGGCCACCCTCTCAATAAAGGTGCTGATGGTTTGCATCTTATGATGCTGCCGTCCGA TCGGCAATGGCAGACGCGCG
Downstream 100 bases:
>100_bases AGACGCGCCGCCCGCGCCGTGCGGGCGGCTTTCCGGCCGGTTCCTTCGCGTGCGCTCGCCGCGCGCCCGATCTCGTCGCC GCCACGCGTGTCGCGTGACG
Product: Rrf2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MFARAPVALTQHYFVMRLTDYTDYSLRVMLFLAVRGEGLSTIQEISDAYGISKNHLMKVVQQLGELGWIETVRGRNGGLR LNAQSVTLTVGQVVRKTENDFALVGCFTGESEAHRNCVIQSACRLKGVFAAAREAFFAELDKHTIGELAQPASQLSMLLG LTPVRIVPAADVRSAVTVVG
Sequences:
>Translated_180_residues MFARAPVALTQHYFVMRLTDYTDYSLRVMLFLAVRGEGLSTIQEISDAYGISKNHLMKVVQQLGELGWIETVRGRNGGLR LNAQSVTLTVGQVVRKTENDFALVGCFTGESEAHRNCVIQSACRLKGVFAAAREAFFAELDKHTIGELAQPASQLSMLLG LTPVRIVPAADVRSAVTVVG >Mature_180_residues MFARAPVALTQHYFVMRLTDYTDYSLRVMLFLAVRGEGLSTIQEISDAYGISKNHLMKVVQQLGELGWIETVRGRNGGLR LNAQSVTLTVGQVVRKTENDFALVGCFTGESEAHRNCVIQSACRLKGVFAAAREAFFAELDKHTIGELAQPASQLSMLLG LTPVRIVPAADVRSAVTVVG
Specific function: Nitric oxide-responsive transcriptional regulator [H]
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790621, Length=145, Percent_Identity=38.6206896551724, Blast_Score=116, Evalue=1e-27,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000944 - InterPro: IPR011991 [H]
Pfam domain/function: PF02082 Rrf2 [H]
EC number: NA
Molecular weight: Translated: 19642; Mature: 19642
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFARAPVALTQHYFVMRLTDYTDYSLRVMLFLAVRGEGLSTIQEISDAYGISKNHLMKVV CCCCCCHHHHHHEEEEEEECCCCHHHHHHHEEECCCCCHHHHHHHHHHHCCCHHHHHHHH QQLGELGWIETVRGRNGGLRLNAQSVTLTVGQVVRKTENDFALVGCFTGESEAHRNCVIQ HHHHHCCCCEEECCCCCCEEEECCEEEEHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH SACRLKGVFAAAREAFFAELDKHTIGELAQPASQLSMLLGLTPVRIVPAADVRSAVTVVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCHHHHHEEECC >Mature Secondary Structure MFARAPVALTQHYFVMRLTDYTDYSLRVMLFLAVRGEGLSTIQEISDAYGISKNHLMKVV CCCCCCHHHHHHEEEEEEECCCCHHHHHHHEEECCCCCHHHHHHHHHHHCCCHHHHHHHH QQLGELGWIETVRGRNGGLRLNAQSVTLTVGQVVRKTENDFALVGCFTGESEAHRNCVIQ HHHHHCCCCEEECCCCCCEEEECCEEEEHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH SACRLKGVFAAAREAFFAELDKHTIGELAQPASQLSMLLGLTPVRIVPAADVRSAVTVVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA