| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83721284
Identifier: 83721284
GI number: 83721284
Start: 1067070
End: 1067528
Strand: Direct
Name: 83721284
Synonym: BTH_I0942
Alternate gene names: NA
Gene position: 1067070-1067528 (Clockwise)
Preceding gene: 83721285
Following gene: 83720545
Centisome position: 28.01
GC content: 67.76
Gene sequence:
>459_bases ATGTCTCACGCTATCGCCGTTGCCTTGTTTCTTCATCTGCTGGCGGTTGCCGTGTGGGTCGGCGGCATGGCGTTCGCGAA CTTCTGCCTGCGTCCCGCGCTGTCGGACCTGTCGCCGCAGTTGCGCCTGCCGCTCGTCGAGGCCGTGTTCGGCCGCTTCT TCAACTGGGTCGCGGGCTCGGTGATCGTGATTCTGCTCACGGGCGGGTTCCTGCTCATGCAATTCGGCGGCGCGCATGCG ACGTGGCCGCTGCACGCGATGGCCGGGCTCGGCGTCGTGATGATGCTGATTTACGGGCATATCCGCTTCGCGCTGTTCCC GCGCATCCGCCGCGCGGTGCAGGCGCAGAACTGGCCGGACGGCGCGCGCGCGGTCAATGCGGTGCGCCTGCTCGTGATCG TCAACCTCGTGCTCGGCGTCGTGACGATCGGCGCGGCCGTGCTGTCGCGCGGCTTCTGA
Upstream 100 bases:
>100_bases AACCGCCATGCGTCACGGCTGTCGAACGCGATCGACGTCTCGCGCGCGGTGCGTTCCAGCAGCGCACCGGTCACCCGAAA ACTAAAAAGGATCCCCCATC
Downstream 100 bases:
>100_bases CGTGCGGCTTCTGACGTGCGCGGGCGCGCCGTGCACAGCCGGTCTCGTTCACGGCCGCTGCAGCAGTCGCGGCCGTCGCA ATCGCCGCCGCGCGCATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSHAIAVALFLHLLAVAVWVGGMAFANFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGSVIVILLTGGFLLMQFGGAHA TWPLHAMAGLGVVMMLIYGHIRFALFPRIRRAVQAQNWPDGARAVNAVRLLVIVNLVLGVVTIGAAVLSRGF
Sequences:
>Translated_152_residues MSHAIAVALFLHLLAVAVWVGGMAFANFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGSVIVILLTGGFLLMQFGGAHA TWPLHAMAGLGVVMMLIYGHIRFALFPRIRRAVQAQNWPDGARAVNAVRLLVIVNLVLGVVTIGAAVLSRGF >Mature_151_residues SHAIAVALFLHLLAVAVWVGGMAFANFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGSVIVILLTGGFLLMQFGGAHAT WPLHAMAGLGVVMMLIYGHIRFALFPRIRRAVQAQNWPDGARAVNAVRLLVIVNLVLGVVTIGAAVLSRGF
Specific function: Unknown
COG id: COG5615
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16357; Mature: 16226
Theoretical pI: Translated: 12.32; Mature: 12.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAIAVALFLHLLAVAVWVGGMAFANFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VIVILLTGGFLLMQFGGAHATWPLHAMAGLGVVMMLIYGHIRFALFPRIRRAVQAQNWPD HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GARAVNAVRLLVIVNLVLGVVTIGAAVLSRGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHAIAVALFLHLLAVAVWVGGMAFANFCLRPALSDLSPQLRLPLVEAVFGRFFNWVAGS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VIVILLTGGFLLMQFGGAHATWPLHAMAGLGVVMMLIYGHIRFALFPRIRRAVQAQNWPD HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GARAVNAVRLLVIVNLVLGVVTIGAAVLSRGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA