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The map label for this gene is fliR [H]

Identifier: 83721282

GI number: 83721282

Start: 31911

End: 32693

Strand: Direct

Name: fliR [H]

Synonym: BTH_I0032

Alternate gene names: 83721282

Gene position: 31911-32693 (Clockwise)

Preceding gene: 83720940

Following gene: 83720500

Centisome position: 0.84

GC content: 68.2

Gene sequence:

>783_bases
ATGTTCTCCGTCACCTACGCGCAACTGAACGGATGGCTCACGGCCTTCCTGTGGCCGTTCGTGCGGATGCTCGCGCTCGT
CGCGCTCGCGCCGGTGACAGGCCACCGCGCGACGCCCGTGCGCGTGAAGATCGGGCTCGCGGGCTTCATGGCGCTCGTCG
TCGCGCCGACGCTGCCGCCGATGCCCGCAGCCACCGTGTTCTCCGCGCAGGGCGTGTGGATCATCGTCAACCAGTTCCTG
ATCGGCGCGGCGCTCGGCTTCACGATGCAGATCGTGTTCGCGGCGGTCGAGGCGGCGGGCGACATCATCGGCCTGTCGAT
GGGGCTCGGCTTCGCGACCTTCTTCGATCCGCATTCGAGCGGCGCGACGCCCGTGATGGGGCGCTTCCTGAATGCGGTCG
CGATCCTCGCGTTTCTCGCGTTCGACGGGCATCTGCAGGTGTTCGCCGTGCTCGTCGACTCGTTCAGGCTCGTGCCGATC
TCGGCCGACCTGCTGCGCGCGGCCGGCTGGCAGACGCTCGTGGCATTCGGCTCGGCGATTTTCGAGATGGGGCTGTTGCT
CGCGCTGCCCGTCGTCGCGGCGCTGCTGATCGCGAACCTCGCGCTCGGCATCCTGAACCGCGCGGCGCCGCAGATCGGGA
TCTTCCAGGTCGGCTTTCCGGTGACGATGCTCGTCGGCCTGCTGCTCGTCCAGTTGATGGCGCCGAACCTGATTCCGTTC
GTCGGGCGGCTGTTCGATACCGGCGTCGATTTCGTCGGGCGCGTTGCGGCCGGCATGCGTTGA

Upstream 100 bases:

>100_bases
GCGCGGCGCGCTCGTCCGTCTCGCCCGCTCCGCTCGATTCGTTCGATCCATCCGATCCGTCGGCCTGCTCCGCCCCCGCC
CTCGTCTCCATCTCCGATCG

Downstream 100 bases:

>100_bases
GCGGCGGCATGCAGGCGGCCGGCATGCGCGCCGGCTCCGGTATCGGCCGATCGCGCTGCAACGCCCGCCGGCGTTTGCCG
TCCGGCGCGGGTCGCGGCCA

Product: flagellar biosynthetic protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MFSVTYAQLNGWLTAFLWPFVRMLALVALAPVTGHRATPVRVKIGLAGFMALVVAPTLPPMPAATVFSAQGVWIIVNQFL
IGAALGFTMQIVFAAVEAAGDIIGLSMGLGFATFFDPHSSGATPVMGRFLNAVAILAFLAFDGHLQVFAVLVDSFRLVPI
SADLLRAAGWQTLVAFGSAIFEMGLLLALPVVAALLIANLALGILNRAAPQIGIFQVGFPVTMLVGLLLVQLMAPNLIPF
VGRLFDTGVDFVGRVAAGMR

Sequences:

>Translated_260_residues
MFSVTYAQLNGWLTAFLWPFVRMLALVALAPVTGHRATPVRVKIGLAGFMALVVAPTLPPMPAATVFSAQGVWIIVNQFL
IGAALGFTMQIVFAAVEAAGDIIGLSMGLGFATFFDPHSSGATPVMGRFLNAVAILAFLAFDGHLQVFAVLVDSFRLVPI
SADLLRAAGWQTLVAFGSAIFEMGLLLALPVVAALLIANLALGILNRAAPQIGIFQVGFPVTMLVGLLLVQLMAPNLIPF
VGRLFDTGVDFVGRVAAGMR
>Mature_260_residues
MFSVTYAQLNGWLTAFLWPFVRMLALVALAPVTGHRATPVRVKIGLAGFMALVVAPTLPPMPAATVFSAQGVWIIVNQFL
IGAALGFTMQIVFAAVEAAGDIIGLSMGLGFATFFDPHSSGATPVMGRFLNAVAILAFLAFDGHLQVFAVLVDSFRLVPI
SADLLRAAGWQTLVAFGSAIFEMGLLLALPVVAALLIANLALGILNRAAPQIGIFQVGFPVTMLVGLLLVQLMAPNLIPF
VGRLFDTGVDFVGRVAAGMR

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=259, Percent_Identity=45.5598455598456, Blast_Score=189, Evalue=1e-49,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 27365; Mature: 27365

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSVTYAQLNGWLTAFLWPFVRMLALVALAPVTGHRATPVRVKIGLAGFMALVVAPTLPP
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCC
MPAATVFSAQGVWIIVNQFLIGAALGFTMQIVFAAVEAAGDIIGLSMGLGFATFFDPHSS
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
GATPVMGRFLNAVAILAFLAFDGHLQVFAVLVDSFRLVPISADLLRAAGWQTLVAFGSAI
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCHHHHHHCCHHHHHHHHHHH
FEMGLLLALPVVAALLIANLALGILNRAAPQIGIFQVGFPVTMLVGLLLVQLMAPNLIPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCHHHHH
VGRLFDTGVDFVGRVAAGMR
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSVTYAQLNGWLTAFLWPFVRMLALVALAPVTGHRATPVRVKIGLAGFMALVVAPTLPP
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCC
MPAATVFSAQGVWIIVNQFLIGAALGFTMQIVFAAVEAAGDIIGLSMGLGFATFFDPHSS
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
GATPVMGRFLNAVAILAFLAFDGHLQVFAVLVDSFRLVPISADLLRAAGWQTLVAFGSAI
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCHHHHHHCCHHHHHHHHHHH
FEMGLLLALPVVAALLIANLALGILNRAAPQIGIFQVGFPVTMLVGLLLVQLMAPNLIPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCHHHHH
VGRLFDTGVDFVGRVAAGMR
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685; 7934865 [H]