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The map label for this gene is ybgL [C]

Identifier: 83721264

GI number: 83721264

Start: 262145

End: 262909

Strand: Reverse

Name: ybgL [C]

Synonym: BTH_I0228

Alternate gene names: 83721264

Gene position: 262909-262145 (Counterclockwise)

Preceding gene: 83719147

Following gene: 83720576

Centisome position: 6.9

GC content: 71.11

Gene sequence:

>765_bases
ATGGAAATCGATTTGAACGCCGACCTCGGCGAAGGCTGCGGCTCCGACGAGGCGCTTCTCGACCTCGTCACGTCGGCGAA
CATCGCGTGCGGCTGGCACGCGGGCGGCGCCCCGGCGATGCGCGACTGCGTGCGCTGGGCGGTGGAAAAAGGCGTGTCGA
TCGGCGCGCATCCGAGCTTTCACGATCCGGAGAACTTCGGCCGCAAGGAAATGGACCTGCCCGCGAGCGAGATCTACGCG
GGCGTGCTGTATCAATTGGGCGCGCTATCTGCGATCGCTCAGGCGGAAGGCGGGCGCATCGCGCACGTGAAGCCGCACGG
CGCGCTGTACAACCAGGCCGCGCGCGACGCCGAGATCGCCGACGCGGTGGTGTCGGCGATCCACGATTTCGATCCGTCGC
TCGCGGTGTTCGGCCTCGCGAGCAGCGGATTCGTCGATGCCGCGCGGCATGCGGGGCTCGTCGCCGTCGAGGAAGTGTTC
GCCGACCGCGGCTATCGCGCGGACGGCTCGCTCGTGCCGCGCAGCCAGCCGGGCGCGCTCGTCGACGACGAGCGCGAGAT
GCTCGCGCGCACGCTCGAGATGGTCCGCGGCCAGCGCGTGCGCGCGGTCACGGGCGAATGGGTGCCGCTCAACGCGCAGA
CGGTCTGCCTGCATGGCGACGGCCCGCACGCGCTCGCGTTCGCGAAGCGCATCCGCGAGGCGCTCGAGGCGGCCGGCATC
GACGTGCATGCGCCCGGCGCGCTGCACGCGGGGGAGCGCGCTTAA

Upstream 100 bases:

>100_bases
GAGGCGCTGCAGCGCGCGCTCGCCGCGCGCGCAGCGGCCGCATGATTCCGGGACCGGACGCGCCACGCGGCCGGTCGCGA
ACGCTTTGGGCAGAAACATC

Downstream 100 bases:

>100_bases
CGATTCGGGCGGCAATTCAGCCGACATTCGCACGGGGGCGCGCGATTCGCCCGTGCGGCCGGCGGCGCTTTTTTCTGAGC
GACCCGGCACCGCGCAAGCG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGAPAMRDCVRWAVEKGVSIGAHPSFHDPENFGRKEMDLPASEIYA
GVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDAEIADAVVSAIHDFDPSLAVFGLASSGFVDAARHAGLVAVEEVF
ADRGYRADGSLVPRSQPGALVDDEREMLARTLEMVRGQRVRAVTGEWVPLNAQTVCLHGDGPHALAFAKRIREALEAAGI
DVHAPGALHAGERA

Sequences:

>Translated_254_residues
MEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGAPAMRDCVRWAVEKGVSIGAHPSFHDPENFGRKEMDLPASEIYA
GVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDAEIADAVVSAIHDFDPSLAVFGLASSGFVDAARHAGLVAVEEVF
ADRGYRADGSLVPRSQPGALVDDEREMLARTLEMVRGQRVRAVTGEWVPLNAQTVCLHGDGPHALAFAKRIREALEAAGI
DVHAPGALHAGERA
>Mature_254_residues
MEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGAPAMRDCVRWAVEKGVSIGAHPSFHDPENFGRKEMDLPASEIYA
GVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDAEIADAVVSAIHDFDPSLAVFGLASSGFVDAARHAGLVAVEEVF
ADRGYRADGSLVPRSQPGALVDDEREMLARTLEMVRGQRVRAVTGEWVPLNAQTVCLHGDGPHALAFAKRIREALEAAGI
DVHAPGALHAGERA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=61.8852459016393, Blast_Score=313, Evalue=7e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y228_BURTA (Q2T213)

Other databases:

- EMBL:   CP000086
- RefSeq:   YP_440786.1
- ProteinModelPortal:   Q2T213
- SMR:   Q2T213
- STRING:   Q2T213
- GeneID:   3849537
- GenomeReviews:   CP000086_GR
- KEGG:   bte:BTH_I0228
- TIGR:   BTH_I0228
- eggNOG:   COG1540
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- ProtClustDB:   PRK05406
- BioCyc:   BTHA271848:BTH_I0228-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 26699; Mature: 26699

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGAPAMRDCVRWAVEKGVSIGAHPSF
CEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
HDPENFGRKEMDLPASEIYAGVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDAEIA
CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
DAVVSAIHDFDPSLAVFGLASSGFVDAARHAGLVAVEEVFADRGYRADGSLVPRSQPGAL
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
VDDEREMLARTLEMVRGQRVRAVTGEWVPLNAQTVCLHGDGPHALAFAKRIREALEAAGI
CCCHHHHHHHHHHHHCCCEEEEECCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
DVHAPGALHAGERA
CEECCCCCCCCCCC
>Mature Secondary Structure
MEIDLNADLGEGCGSDEALLDLVTSANIACGWHAGGAPAMRDCVRWAVEKGVSIGAHPSF
CEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
HDPENFGRKEMDLPASEIYAGVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDAEIA
CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
DAVVSAIHDFDPSLAVFGLASSGFVDAARHAGLVAVEEVFADRGYRADGSLVPRSQPGAL
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
VDDEREMLARTLEMVRGQRVRAVTGEWVPLNAQTVCLHGDGPHALAFAKRIREALEAAGI
CCCHHHHHHHHHHHHCCCEEEEECCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
DVHAPGALHAGERA
CEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA