| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is echA8 [H]
Identifier: 83721249
GI number: 83721249
Start: 2859064
End: 2860206
Strand: Reverse
Name: echA8 [H]
Synonym: BTH_I2504
Alternate gene names: 83721249
Gene position: 2860206-2859064 (Counterclockwise)
Preceding gene: 83719484
Following gene: 83718655
Centisome position: 75.09
GC content: 71.3
Gene sequence:
>1143_bases ATGAACGCATCCCATTCCGATTCGCCCCAGGCCGACGTTCGCGCGCATGTCGCGAACCGCATCGGCTTTCTCGAACTGAA CCGTCCGCAGGCGCTCAACGCGCTGTCGACCGACATGATCCGCACGCTGCATCGCGCGCTCGACGCGTGGCGCGACGACG CCGGCGTGCTCGCCGTCGTGATCCACAGTCCGCATCCGCGCGCGTTCTGCGCGGGCGGAGACGTGCGCTTCTTCCATGAT GCGCACCGGCGCGGCGATCAAGCGTCGATCGACAGGTTCTTCATCGAAGAGTATTCGCTGAACCACGCGATCTTCACGTA TCCGAAGCCGTATATCGCGCTGATGCACGGTGTCGTGATGGGCGGCGGAATGGGCATTTCGCAGGCGGCCAAGCGCACGG GCGGGCTGCGCGTCGTCACCGACTCGACGAAGATGGCGATGCCGGAAACGCGCATCGGGCTCTTTCCGGACGTCGGCATG AGCTGGTTCCTCGCGCGCACGCCGGGCGCGCTCGGCCGCTATCTCGCCGTCACGGGCGCGACGCTCGATGCGGCGAGCGC GCTGTACGCGGGGCTCGCCGACGCCTATCTGCCGGATGCGGCGCTGCCGGCGCTCGTCGACGCGCTGCGCACCGAGCGCT TCGACGACGGCGCGGCGGTGACGGCGCGCGTCGCGGCCGAAGCCGCGCGGCACGCGCCGGCGCCCGCGCCCGATGCGTCG GCGCTCGCGGCCGCGCGCGCGTCGATCGACCGGCATTTCGCGCAGGCGGACGTCGCCGCGATCGCGGCGTCGCTCGACGC CGAGCGCGACGAAGCGGTGCGCGCCGCGTGGGCCGACAAGGCGCGCGACGCGATGCGCGGCGGCTCGCTGTCGCCGCTGT CGATGGCGGTGTCGCTCGAAGTCGTCGAGCGCGCGCGCGGCGCGACGATGGCCGACTGCCTGCGGCGCGATCTCGATCTG ACGCGCTCGACGTTCGCGCGCGGCGATGTGATCGAAGGCGTGCGCGCGGTGATCGTCGACAAGGATCACGCGCCGAAGTG GCGCTATCCGGCGATCGCCGACGTGTCGGCGGAGGCGGTCGCGACGATGTTCGAGAGCCCGTGGCGCGCGGACGAGCATC CGCTCAAGGGCTTGCGCGACTGA
Upstream 100 bases:
>100_bases ATCGTCGGGCTCGCGCTCATCATCTCGGGCGTCGCGGTGCTCAATCTCTTTTCGAAAATGCAGGCGCATTGACGGCCGCG CCGGCCCACTTTCCATCGTC
Downstream 100 bases:
>100_bases CGATCGCGCGGATCGCGCGCGGCGCGACGCGCGGCGGGAGATCCGACGGACCGCCGGAGGCGGCCGGCACGGCGGCGGGC GCGATTGCCGCGAGGCTCGA
Product: 3-hydroxyisobutyryl-CoA hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MNASHSDSPQADVRAHVANRIGFLELNRPQALNALSTDMIRTLHRALDAWRDDAGVLAVVIHSPHPRAFCAGGDVRFFHD AHRRGDQASIDRFFIEEYSLNHAIFTYPKPYIALMHGVVMGGGMGISQAAKRTGGLRVVTDSTKMAMPETRIGLFPDVGM SWFLARTPGALGRYLAVTGATLDAASALYAGLADAYLPDAALPALVDALRTERFDDGAAVTARVAAEAARHAPAPAPDAS ALAAARASIDRHFAQADVAAIAASLDAERDEAVRAAWADKARDAMRGGSLSPLSMAVSLEVVERARGATMADCLRRDLDL TRSTFARGDVIEGVRAVIVDKDHAPKWRYPAIADVSAEAVATMFESPWRADEHPLKGLRD
Sequences:
>Translated_380_residues MNASHSDSPQADVRAHVANRIGFLELNRPQALNALSTDMIRTLHRALDAWRDDAGVLAVVIHSPHPRAFCAGGDVRFFHD AHRRGDQASIDRFFIEEYSLNHAIFTYPKPYIALMHGVVMGGGMGISQAAKRTGGLRVVTDSTKMAMPETRIGLFPDVGM SWFLARTPGALGRYLAVTGATLDAASALYAGLADAYLPDAALPALVDALRTERFDDGAAVTARVAAEAARHAPAPAPDAS ALAAARASIDRHFAQADVAAIAASLDAERDEAVRAAWADKARDAMRGGSLSPLSMAVSLEVVERARGATMADCLRRDLDL TRSTFARGDVIEGVRAVIVDKDHAPKWRYPAIADVSAEAVATMFESPWRADEHPLKGLRD >Mature_380_residues MNASHSDSPQADVRAHVANRIGFLELNRPQALNALSTDMIRTLHRALDAWRDDAGVLAVVIHSPHPRAFCAGGDVRFFHD AHRRGDQASIDRFFIEEYSLNHAIFTYPKPYIALMHGVVMGGGMGISQAAKRTGGLRVVTDSTKMAMPETRIGLFPDVGM SWFLARTPGALGRYLAVTGATLDAASALYAGLADAYLPDAALPALVDALRTERFDDGAAVTARVAAEAARHAPAPAPDAS ALAAARASIDRHFAQADVAAIAASLDAERDEAVRAAWADKARDAMRGGSLSPLSMAVSLEVVERARGATMADCLRRDLDL TRSTFARGDVIEGVRAVIVDKDHAPKWRYPAIADVSAEAVATMFESPWRADEHPLKGLRD
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI37594471, Length=372, Percent_Identity=33.0645161290323, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI37594469, Length=325, Percent_Identity=32.3076923076923, Blast_Score=162, Evalue=4e-40, Organism=Homo sapiens, GI194097323, Length=185, Percent_Identity=29.7297297297297, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1788682, Length=200, Percent_Identity=27, Blast_Score=65, Evalue=8e-12, Organism=Caenorhabditis elegans, GI25144160, Length=358, Percent_Identity=37.7094972067039, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI25144157, Length=358, Percent_Identity=37.9888268156425, Blast_Score=209, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6320241, Length=348, Percent_Identity=28.735632183908, Blast_Score=135, Evalue=7e-33, Organism=Drosophila melanogaster, GI28571730, Length=355, Percent_Identity=36.3380281690141, Blast_Score=208, Evalue=4e-54, Organism=Drosophila melanogaster, GI28571729, Length=355, Percent_Identity=36.3380281690141, Blast_Score=208, Evalue=4e-54, Organism=Drosophila melanogaster, GI24653139, Length=177, Percent_Identity=32.7683615819209, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 40738; Mature: 40738
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASHSDSPQADVRAHVANRIGFLELNRPQALNALSTDMIRTLHRALDAWRDDAGVLAVV CCCCCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE IHSPHPRAFCAGGDVRFFHDAHRRGDQASIDRFFIEEYSLNHAIFTYPKPYIALMHGVVM EECCCCCEEECCCCEEEHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH GGGMGISQAAKRTGGLRVVTDSTKMAMPETRIGLFPDVGMSWFLARTPGALGRYLAVTGA CCCCCHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHEECC TLDAASALYAGLADAYLPDAALPALVDALRTERFDDGAAVTARVAAEAARHAPAPAPDAS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHH ALAAARASIDRHFAQADVAAIAASLDAERDEAVRAAWADKARDAMRGGSLSPLSMAVSLE HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VVERARGATMADCLRRDLDLTRSTFARGDVIEGVRAVIVDKDHAPKWRYPAIADVSAEAV HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCCCCCCCCCCHHHHH ATMFESPWRADEHPLKGLRD HHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNASHSDSPQADVRAHVANRIGFLELNRPQALNALSTDMIRTLHRALDAWRDDAGVLAVV CCCCCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE IHSPHPRAFCAGGDVRFFHDAHRRGDQASIDRFFIEEYSLNHAIFTYPKPYIALMHGVVM EECCCCCEEECCCCEEEHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH GGGMGISQAAKRTGGLRVVTDSTKMAMPETRIGLFPDVGMSWFLARTPGALGRYLAVTGA CCCCCHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHEECC TLDAASALYAGLADAYLPDAALPALVDALRTERFDDGAAVTARVAAEAARHAPAPAPDAS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHH ALAAARASIDRHFAQADVAAIAASLDAERDEAVRAAWADKARDAMRGGSLSPLSMAVSLE HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VVERARGATMADCLRRDLDLTRSTFARGDVIEGVRAVIVDKDHAPKWRYPAIADVSAEAV HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCCCCCCCCCCHHHHH ATMFESPWRADEHPLKGLRD HHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]