| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yeaS [C]
Identifier: 83721239
GI number: 83721239
Start: 3196495
End: 3197154
Strand: Reverse
Name: yeaS [C]
Synonym: BTH_I2782
Alternate gene names: 83721239
Gene position: 3197154-3196495 (Counterclockwise)
Preceding gene: 83721358
Following gene: 83718685
Centisome position: 83.93
GC content: 67.88
Gene sequence:
>660_bases ATGTTCGGTCACGCACTCGGCATCACGGATCTCTGGACCTACGTGTTCGGCGTGGTGTTCATCATTCTGCTGCCGGGGCC GAACTCGATGTACGTGCTGTCGCTCGCCGCGCAGCGCGGTGTGAAGGCCGGCTACCGCGCCGCGTGCGGCGTGTTCGTGG GCGACACCGTGCTGATGGTGCTGTCCGCCGCGGGCGTCGCGTCGCTCCTGAAGGCGAACCCGTTGCTGTTCTCGGTCGTC AAGTACGGCGGCGCCGCATACCTGCTGTACATCGGCGCAGGCATGCTGCGCGGCGCGTGGCGAAAGCTCGCGCGGCCCGC GGACGCGGGCGCCGACGTGCGGCGCGCGGTCGACGGCGAGCGGCCGTTTCGCAAGGCGCTCGTCGTGAGCCTCCTGAATC CGAAGGCGATCCTGTTCTTCATCTCGTTCTTCATCCAGTTCGTCGATCCGTCCTACGCGCATCCGGCGCTGTCGTTCGTC GTGCTGGGCGCGATCGCGCAATTCGCGAGCTTCGTCTATCTGAGCACGCTGATCTTCACGGGCGCGCGCCTCGCCGATCA TTTCCGTCGCCGCCGCAAGCTCGCGGCCGGCGCGTCGGGCGGCGTGGGCGGCCTGTTCGTCGGCTTTTCCGTGAAGCTCG CGCTCGCGACGATGAGCTGA
Upstream 100 bases:
>100_bases CACGACATCGGCTATCTGTTCGACCGCTTCACCGCGCTGATGGACGCGGCGAAGGCGCGCAGCGCCTGAGTCCATCGCAT CGATTAGGGGGGCTCGCATC
Downstream 100 bases:
>100_bases ACATCGCCCGCCGTTCGCGCATCAACGATTATTTTTTGAATCCCAATAGCCATGCCAAAACGCACAGACATCAACAGCAT CCTCATCATCGGCGCCGGCC
Product: leucine export protein LeuE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMVLSAAGVASLLKANPLLFSVV KYGGAAYLLYIGAGMLRGAWRKLARPADAGADVRRAVDGERPFRKALVVSLLNPKAILFFISFFIQFVDPSYAHPALSFV VLGAIAQFASFVYLSTLIFTGARLADHFRRRRKLAAGASGGVGGLFVGFSVKLALATMS
Sequences:
>Translated_219_residues MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMVLSAAGVASLLKANPLLFSVV KYGGAAYLLYIGAGMLRGAWRKLARPADAGADVRRAVDGERPFRKALVVSLLNPKAILFFISFFIQFVDPSYAHPALSFV VLGAIAQFASFVYLSTLIFTGARLADHFRRRRKLAAGASGGVGGLFVGFSVKLALATMS >Mature_219_residues MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMVLSAAGVASLLKANPLLFSVV KYGGAAYLLYIGAGMLRGAWRKLARPADAGADVRRAVDGERPFRKALVVSLLNPKAILFFISFFIQFVDPSYAHPALSFV VLGAIAQFASFVYLSTLIFTGARLADHFRRRRKLAAGASGGVGGLFVGFSVKLALATMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788099, Length=208, Percent_Identity=45.1923076923077, Blast_Score=190, Evalue=5e-50, Organism=Escherichia coli, GI48994978, Length=196, Percent_Identity=30.1020408163265, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI48994979, Length=156, Percent_Identity=28.2051282051282, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004778 - InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 23287; Mature: 23287
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMV CCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHH LSAAGVASLLKANPLLFSVVKYGGAAYLLYIGAGMLRGAWRKLARPADAGADVRRAVDGE HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC RPFRKALVVSLLNPKAILFFISFFIQFVDPSYAHPALSFVVLGAIAQFASFVYLSTLIFT CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GARLADHFRRRRKLAAGASGGVGGLFVGFSVKLALATMS HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECC >Mature Secondary Structure MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMV CCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHH LSAAGVASLLKANPLLFSVVKYGGAAYLLYIGAGMLRGAWRKLARPADAGADVRRAVDGE HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC RPFRKALVVSLLNPKAILFFISFFIQFVDPSYAHPALSFVVLGAIAQFASFVYLSTLIFT CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GARLADHFRRRRKLAAGASGGVGGLFVGFSVKLALATMS HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8169201; 10984043 [H]