| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is purR [H]
Identifier: 83721164
GI number: 83721164
Start: 332040
End: 333059
Strand: Reverse
Name: purR [H]
Synonym: BTH_I0300
Alternate gene names: 83721164
Gene position: 333059-332040 (Counterclockwise)
Preceding gene: 83718421
Following gene: 83720329
Centisome position: 8.74
GC content: 71.18
Gene sequence:
>1020_bases ATGGGCACCACCATTCGCGACGTTGCGCAAGCGGCCAACGTGTCGATCGGCACCGTGTCGCGCGCGCTCAAGAATCAGCC CGGCCTGTCCGAGGCGACGCGCGCGCGCATCGTCGAGATCGCGCATCGGATGAACTACGATCCGACGCAACTGCGCCCGC GGATCAAGCGGCTCACGTTCCTGCTGCATCGCCAGCACAACAACTTCGCGACGACGCCGTTCTTCTCCCACGTGCTGCAC GGCGTGGAAGATGCATGCCGCGAGCGCGGCATCGTGCCGTCGCTGCTGACGACGGGCCCGACCGACGACGTGATCCGCCA GATGCGTCCGCACGCGCCCGACGCGATCGCGGTCGCGGGTTTCATGGAGCCGGAGACGCTCGAGGCGCTCGCCGCGACGG GCCGGCCGCTCGTGCTCATCGACATCCGCGCGCCCGGACTGCGCTCGATCAACGTCGACAACGCGGGCGGCGCGGCGCTC GCGATGCATCACCTGTTCGCATCGGGCCGCCGGCGCATCGCGTTCATCGGCGGCTCGCTCGCGCACTACAGCATCGCGCA GCGCGCGCTCGGCTATCGCCGTGCGTTCTTCGACGCGGGCATGCTGTTCGATCCGTCGCTCGAGCTGTCGATCGACACGA GCCTCGGCCCCGACGCCGGCGCGGCGCACGCGATGCGGCAACTGCTCGACGCGGGCGGCCCGCTGCCCGACGCAGTGTTC GCGTACAACGATGCGGCCGCACTCGCCGCGATGCGCGTGTGCGTCGAGCGCGGCGTGCGCGTGCCCGAGGACATCGCATT CGTCGGCTTCGACGACATCCCGGCCGCCGCGCACGCGGCCCCGCCCCTCACGACGCTCGCGATCGACAAGGAAGCGCTCG GCCGGCAAGGCGTCGAGCTGCTGCTCGCCGATTCGCCCGCGCAAGCCGAACTCAGCCTCCCCGTGCAGCTCGTCGCGCGG GCCAGCAGCGCAGGCGCCGCACACGCGCCGCGCGCCCTCACCTCGGTACTCGGATCATGA
Upstream 100 bases:
>100_bases ATACATAAGCACTTATAAGCGCGATCGAGATGATTCCGGGACGTTTCGCGGCGATTTTTACTATACAATCGCCAACACCC TAAACATCCCGGCTCAAACG
Downstream 100 bases:
>100_bases CGACCTCAGCCACGCCCGCCCCCCGTCCGGCGCCCAACGCGCCGCCCGCCGCCGCGCCGTACGTCGCGAGCTTCCGCGAC CCGCAGTTCCTCGTCGCGCA
Product: LacI family transcription regulator
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MGTTIRDVAQAANVSIGTVSRALKNQPGLSEATRARIVEIAHRMNYDPTQLRPRIKRLTFLLHRQHNNFATTPFFSHVLH GVEDACRERGIVPSLLTTGPTDDVIRQMRPHAPDAIAVAGFMEPETLEALAATGRPLVLIDIRAPGLRSINVDNAGGAAL AMHHLFASGRRRIAFIGGSLAHYSIAQRALGYRRAFFDAGMLFDPSLELSIDTSLGPDAGAAHAMRQLLDAGGPLPDAVF AYNDAAALAAMRVCVERGVRVPEDIAFVGFDDIPAAAHAAPPLTTLAIDKEALGRQGVELLLADSPAQAELSLPVQLVAR ASSAGAAHAPRALTSVLGS
Sequences:
>Translated_339_residues MGTTIRDVAQAANVSIGTVSRALKNQPGLSEATRARIVEIAHRMNYDPTQLRPRIKRLTFLLHRQHNNFATTPFFSHVLH GVEDACRERGIVPSLLTTGPTDDVIRQMRPHAPDAIAVAGFMEPETLEALAATGRPLVLIDIRAPGLRSINVDNAGGAAL AMHHLFASGRRRIAFIGGSLAHYSIAQRALGYRRAFFDAGMLFDPSLELSIDTSLGPDAGAAHAMRQLLDAGGPLPDAVF AYNDAAALAAMRVCVERGVRVPEDIAFVGFDDIPAAAHAAPPLTTLAIDKEALGRQGVELLLADSPAQAELSLPVQLVAR ASSAGAAHAPRALTSVLGS >Mature_338_residues GTTIRDVAQAANVSIGTVSRALKNQPGLSEATRARIVEIAHRMNYDPTQLRPRIKRLTFLLHRQHNNFATTPFFSHVLHG VEDACRERGIVPSLLTTGPTDDVIRQMRPHAPDAIAVAGFMEPETLEALAATGRPLVLIDIRAPGLRSINVDNAGGAALA MHHLFASGRRRIAFIGGSLAHYSIAQRALGYRRAFFDAGMLFDPSLELSIDTSLGPDAGAAHAMRQLLDAGGPLPDAVFA YNDAAALAAMRVCVERGVRVPEDIAFVGFDDIPAAAHAAPPLTTLAIDKEALGRQGVELLLADSPAQAELSLPVQLVARA SSAGAAHAPRALTSVLGS
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790369, Length=324, Percent_Identity=32.4074074074074, Blast_Score=124, Evalue=9e-30, Organism=Escherichia coli, GI1790194, Length=314, Percent_Identity=32.484076433121, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1789456, Length=319, Percent_Identity=28.2131661442006, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1789202, Length=293, Percent_Identity=31.0580204778157, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1787948, Length=315, Percent_Identity=28.2539682539683, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1786540, Length=370, Percent_Identity=28.1081081081081, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1787580, Length=320, Percent_Identity=25.9375, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1788474, Length=329, Percent_Identity=27.355623100304, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1789068, Length=310, Percent_Identity=27.4193548387097, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI48994940, Length=315, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1787906, Length=307, Percent_Identity=27.3615635179153, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1790715, Length=318, Percent_Identity=25.4716981132075, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 35909; Mature: 35777
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTIRDVAQAANVSIGTVSRALKNQPGLSEATRARIVEIAHRMNYDPTQLRPRIKRLTF CCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLHRQHNNFATTPFFSHVLHGVEDACRERGIVPSLLTTGPTDDVIRQMRPHAPDAIAVAG HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHCCCCCCCEEEEC FMEPETLEALAATGRPLVLIDIRAPGLRSINVDNAGGAALAMHHLFASGRRRIAFIGGSL CCCHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEECCCH AHYSIAQRALGYRRAFFDAGMLFDPSLELSIDTSLGPDAGAAHAMRQLLDAGGPLPDAVF HHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHE AYNDAAALAAMRVCVERGVRVPEDIAFVGFDDIPAAAHAAPPLTTLAIDKEALGRQGVEL ECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHCCCCCEEEEECHHHHCCCCCEE LLADSPAQAELSLPVQLVARASSAGAAHAPRALTSVLGS EEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure GTTIRDVAQAANVSIGTVSRALKNQPGLSEATRARIVEIAHRMNYDPTQLRPRIKRLTF CCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLHRQHNNFATTPFFSHVLHGVEDACRERGIVPSLLTTGPTDDVIRQMRPHAPDAIAVAG HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHCCCCCCCEEEEC FMEPETLEALAATGRPLVLIDIRAPGLRSINVDNAGGAALAMHHLFASGRRRIAFIGGSL CCCHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEECCCH AHYSIAQRALGYRRAFFDAGMLFDPSLELSIDTSLGPDAGAAHAMRQLLDAGGPLPDAVF HHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHE AYNDAAALAAMRVCVERGVRVPEDIAFVGFDDIPAAAHAAPPLTTLAIDKEALGRQGVEL ECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHCCCCCEEEEECHHHHCCCCCEE LLADSPAQAELSLPVQLVARASSAGAAHAPRALTSVLGS EEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA