| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83721140
Identifier: 83721140
GI number: 83721140
Start: 1484435
End: 1485457
Strand: Reverse
Name: 83721140
Synonym: BTH_I1323
Alternate gene names: NA
Gene position: 1485457-1484435 (Counterclockwise)
Preceding gene: 83720435
Following gene: 83720378
Centisome position: 39.0
GC content: 65.88
Gene sequence:
>1023_bases ATGACGCCGATCCGCATGCGCACGCATGCGGATCGTTCCGTTTTGCTCGCGGCGTCCGGCAATCTCCCGCCGCCCGCGCG GCGCGCGCCGCAAAAATCGGCTAGGCTTCGCACAGCGCAATCTGCACGGCCGATCCCGCGATCATGGCGACGGGTCCGCC GCGCGCATTCGACGGAGGTGCTCACGATGTGCCGCTGGCTCGCCTACACCGGCAATCCGATTCCACTCGAAACCGTGCTG TTTCGCGCGAAGCATTCGCTGATCGACCAGAGCCTGCATTCGCGGATGGGCGCGACGACGACCAACGGTGACGGCTTCGG CATCGGCTGGTACGGAGAACCCGACGAAATCCCGTTCATCTATCGCTGCGTGAGTCCCGCCTGGAACGACCGCAACCTGC GCGAAGCCGCGCGCGCGATCCGCTCACCGCTGTTCGTCGCGCACGTTCGCTCGGCCACCGACACGCCCGTGCAGGAAACC AACTGCCATCCGTTTCGCCGCGGCCGCTGGCTGTTCGCTCACAACGGCCTGATCCGCCGCTATCACACGCTGCGGCGCGA CCTGATGATGCGCATCGATCCCGCGCTCTTCGCGTCGATCGAAGGATCGACGGACTCCGAAGTGATGTTTCATCTCGCGC TTACGTTCGGGCTCGAGCACGATCCGCTGACCGCGCTCGAGCGAATGGCGGGCGCGATTGAAGACGCGGGCGCGCAGCAT CGCGTCGACGCGCCGCTCAACATGACGGTCTGCGCGACGGACGGCGAGCAAATCGTCGCGGTCCGCTACTCGAGCGAGCA CGACTCGCGCTCGCTCTTTCACAGCACGTCGTTTCGCCATCTGCACGAGCTCTATCCGCACGACCCGCGCATCCGCGCGA TCGGCGACGATGCGTTCCTCGTGTTGTCCGAGCCGCTCGTCGACTTGCACGACGCGTGGGAAAAGATCCCCGAAAGCACC GCGATCATTGCGCGCCGCGGCGACATCCGGCAGCTTCCCTTCAAGCCGCGTCGCTCGACATAG
Upstream 100 bases:
>100_bases GACGCACGTCCGCGACCTGACGCGACCTGGCGCGATGAGCCGCGCGCGGCGCTTCGCGCGAGCGCCGGCAAGTGGCGACG GATCGCAATGAAAGCGCCAT
Downstream 100 bases:
>100_bases CCCGCCGCGCATGCGGCGAAGGTTGCTCCATCGCCGCGAGTCGGTTATAAAAGGCCCCTTTCGCGTGGCTTCACGGCCGC CTCCGTTCAATTCATTTGGA
Product: YafJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTPIRMRTHADRSVLLAASGNLPPPARRAPQKSARLRTAQSARPIPRSWRRVRRAHSTEVLTMCRWLAYTGNPIPLETVL FRAKHSLIDQSLHSRMGATTTNGDGFGIGWYGEPDEIPFIYRCVSPAWNDRNLREAARAIRSPLFVAHVRSATDTPVQET NCHPFRRGRWLFAHNGLIRRYHTLRRDLMMRIDPALFASIEGSTDSEVMFHLALTFGLEHDPLTALERMAGAIEDAGAQH RVDAPLNMTVCATDGEQIVAVRYSSEHDSRSLFHSTSFRHLHELYPHDPRIRAIGDDAFLVLSEPLVDLHDAWEKIPEST AIIARRGDIRQLPFKPRRST
Sequences:
>Translated_340_residues MTPIRMRTHADRSVLLAASGNLPPPARRAPQKSARLRTAQSARPIPRSWRRVRRAHSTEVLTMCRWLAYTGNPIPLETVL FRAKHSLIDQSLHSRMGATTTNGDGFGIGWYGEPDEIPFIYRCVSPAWNDRNLREAARAIRSPLFVAHVRSATDTPVQET NCHPFRRGRWLFAHNGLIRRYHTLRRDLMMRIDPALFASIEGSTDSEVMFHLALTFGLEHDPLTALERMAGAIEDAGAQH RVDAPLNMTVCATDGEQIVAVRYSSEHDSRSLFHSTSFRHLHELYPHDPRIRAIGDDAFLVLSEPLVDLHDAWEKIPEST AIIARRGDIRQLPFKPRRST >Mature_339_residues TPIRMRTHADRSVLLAASGNLPPPARRAPQKSARLRTAQSARPIPRSWRRVRRAHSTEVLTMCRWLAYTGNPIPLETVLF RAKHSLIDQSLHSRMGATTTNGDGFGIGWYGEPDEIPFIYRCVSPAWNDRNLREAARAIRSPLFVAHVRSATDTPVQETN CHPFRRGRWLFAHNGLIRRYHTLRRDLMMRIDPALFASIEGSTDSEVMFHLALTFGLEHDPLTALERMAGAIEDAGAQHR VDAPLNMTVCATDGEQIVAVRYSSEHDSRSLFHSTSFRHLHELYPHDPRIRAIGDDAFLVLSEPLVDLHDAWEKIPESTA IIARRGDIRQLPFKPRRST
Specific function: Unknown
COG id: COG0121
COG function: function code R; Predicted glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324138, Length=296, Percent_Identity=32.0945945945946, Blast_Score=136, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017808 - InterPro: IPR017932 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38579; Mature: 38448
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIRMRTHADRSVLLAASGNLPPPARRAPQKSARLRTAQSARPIPRSWRRVRRAHSTEV CCCCCCCCCCCCEEEEEECCCCCCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LTMCRWLAYTGNPIPLETVLFRAKHSLIDQSLHSRMGATTTNGDGFGIGWYGEPDEIPFI HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEE YRCVSPAWNDRNLREAARAIRSPLFVAHVRSATDTPVQETNCHPFRRGRWLFAHNGLIRR EEECCCCCCCCCHHHHHHHHHCCHHEEHHHCCCCCCCCCCCCCCHHCCCEEEECCCHHHH YHTLRRDLMMRIDPALFASIEGSTDSEVMFHLALTFGLEHDPLTALERMAGAIEDAGAQH HHHHHHHHHHHCCHHHEEEECCCCCHHHHHEEHHHHCCCCCHHHHHHHHHHHHHHCCCCC RVDAPLNMTVCATDGEQIVAVRYSSEHDSRSLFHSTSFRHLHELYPHDPRIRAIGDDAFL CCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEE VLSEPLVDLHDAWEKIPESTAIIARRGDIRQLPFKPRRST EECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure TPIRMRTHADRSVLLAASGNLPPPARRAPQKSARLRTAQSARPIPRSWRRVRRAHSTEV CCCCCCCCCCCEEEEEECCCCCCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LTMCRWLAYTGNPIPLETVLFRAKHSLIDQSLHSRMGATTTNGDGFGIGWYGEPDEIPFI HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEE YRCVSPAWNDRNLREAARAIRSPLFVAHVRSATDTPVQETNCHPFRRGRWLFAHNGLIRR EEECCCCCCCCCHHHHHHHHHCCHHEEHHHCCCCCCCCCCCCCCHHCCCEEEECCCHHHH YHTLRRDLMMRIDPALFASIEGSTDSEVMFHLALTFGLEHDPLTALERMAGAIEDAGAQH HHHHHHHHHHHCCHHHEEEECCCCCHHHHHEEHHHHCCCCCHHHHHHHHHHHHHHCCCCC RVDAPLNMTVCATDGEQIVAVRYSSEHDSRSLFHSTSFRHLHELYPHDPRIRAIGDDAFL CCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEE VLSEPLVDLHDAWEKIPESTAIIARRGDIRQLPFKPRRST EECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]