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The map label for this gene is yoaB [C]

Identifier: 83721137

GI number: 83721137

Start: 2961598

End: 2961951

Strand: Reverse

Name: yoaB [C]

Synonym: BTH_I2598

Alternate gene names: 83721137

Gene position: 2961951-2961598 (Counterclockwise)

Preceding gene: 83718595

Following gene: 83719568

Centisome position: 77.76

GC content: 64.69

Gene sequence:

>354_bases
ATGGCAGTTACTCGTCACCACGTCGGTCCCCGTCTTTCCGAAATCGCGATTCACAACGGTACCGTCTACCTCGCGGGCCA
GATCGCAGAGGACACTGCGCAGGACATCAAGGGCCAGACGCGCGAAGTGCTCGCCCACATCGACCGCCTGCTCGGCGAGG
CGAACAGCGACAAGTCGCATCTGCTGTCGGTGCAGATCTTCATCTCCGACATGGCGAACTTCCCGGGCATGAACGAAGTG
TGGGATGCATGGGTCGCCCAGGGCGCGACGCCGCCGCGCGCGACCGTCGAGGCGAAGCTCGCGAATCCCGCCTGCCTCGT
CGAGGTGGTGGTGGTCGCCGCGCAATGCACCTGA

Upstream 100 bases:

>100_bases
CGTCGGAGACGCGCCGTACGCGTCATAATATGCGGTTCGGCGCCGCACGCCCGCCGCATGCGGCGTCGCTCCCCGATCAA
CCATTCAACCGGGAATTCTC

Downstream 100 bases:

>100_bases
GCCGGCGCACGGCACGTTTTTTCAGGCAACTTGCAGTACCCGACGATGACAGCCGAATCCGCATCCTCCGCCACCGCCGC
GGCGCCGTCGCTTGACGACG

Product: L-PSP family endoribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MAVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHIDRLLGEANSDKSHLLSVQIFISDMANFPGMNEV
WDAWVAQGATPPRATVEAKLANPACLVEVVVVAAQCT

Sequences:

>Translated_117_residues
MAVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHIDRLLGEANSDKSHLLSVQIFISDMANFPGMNEV
WDAWVAQGATPPRATVEAKLANPACLVEVVVVAAQCT
>Mature_116_residues
AVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHIDRLLGEANSDKSHLLSVQIFISDMANFPGMNEVW
DAWVAQGATPPRATVEAKLANPACLVEVVVVAAQCT

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=42.1052631578947, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12568; Mature: 12437

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHIDRLLGEANSDKSH
CCCCCCCCCCCHHHEEEECCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHH
LLSVQIFISDMANFPGMNEVWDAWVAQGATPPRATVEAKLANPACLVEVVVVAAQCT
EEHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVTRHHVGPRLSEIAIHNGTVYLAGQIAEDTAQDIKGQTREVLAHIDRLLGEANSDKSH
CCCCCCCCCCHHHEEEECCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHH
LLSVQIFISDMANFPGMNEVWDAWVAQGATPPRATVEAKLANPACLVEVVVVAAQCT
EEHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA