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The map label for this gene is sodC2 [H]

Identifier: 83721059

GI number: 83721059

Start: 977527

End: 978177

Strand: Direct

Name: sodC2 [H]

Synonym: BTH_I0859

Alternate gene names: 83721059

Gene position: 977527-978177 (Clockwise)

Preceding gene: 83719244

Following gene: 83720045

Centisome position: 25.66

GC content: 72.35

Gene sequence:

>651_bases
GTGCGGTGTTTGCGGCGCCGCGAGTCACGGTATCATGACGACTTTCCCGAAGGTCCCCCTTACCGGCCCGGCGGGCGCTC
GCCAGAGCGTTCCGCCCGGCATGAGGATCGCATGAAACGACGACTCGACGGCGTGCCGGGGTGGCTCGCGCTCAATGCGC
CGCTTGTCCTGGCTGCCATCGGCCTTTTGGCCGGCTGCACTACATTCGCATCGCAACACGAAAAGCGCGCCGACGCGCTG
CTCCAGCCGACCGTCGGCAATCAGGCGCGCGGCACGGTGACGCTTGCCGAACGCCCGGACGGCGTGCAGGTCACGTACAA
CTTCGCGGGCCTGCCGCCCAACAGCGACCACGCGTTGCAGATCCACGAGCGCGGCGATTGCAACGCCGCCGACGGCTCGA
GCGCGGGCGTCGTGTTCGCACCCGCGGCCGACCGGCTGCGGGCGGGCGCGCGCGTCGGCGGCGACCTCGGCAACATCCAC
GCGGATGCGAACGGCGTCGCGGCGGGTTTCATCACCGCGCCGGACGTCGCGCTCGACGGCGTGCGCTCGGTGCTCGGCCG
CTCGGTGCTCGTGCATCGCGACCCGGGCGACCCGGCGTTCCCGCAGCACGGCGCGGGCCCCGCGCTCGCGTGCGGCGTCG
TGCGGCAATGA

Upstream 100 bases:

>100_bases
CGGCGTCGCGATCGCAATCGCCGAGCGCGCGCGGGACATGTCGTCGAAGTTTCCGACGATCGTTGTTCAAAATACGTAAA
ATCCCGCGCCGGCCCGCGTC

Downstream 100 bases:

>100_bases
CGCGAGTCGGTGCGTTCGCGATCGCGTAAAATGTGCGCCTTTCGTGGCCGTCGGACCGTCCGGCGGCTTCCTTCCCGATA
CGCAGCGTTTTCCGGCGCCT

Product: superoxide dismutase, Cu-Zn

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MRCLRRRESRYHDDFPEGPPYRPGGRSPERSARHEDRMKRRLDGVPGWLALNAPLVLAAIGLLAGCTTFASQHEKRADAL
LQPTVGNQARGTVTLAERPDGVQVTYNFAGLPPNSDHALQIHERGDCNAADGSSAGVVFAPAADRLRAGARVGGDLGNIH
ADANGVAAGFITAPDVALDGVRSVLGRSVLVHRDPGDPAFPQHGAGPALACGVVRQ

Sequences:

>Translated_216_residues
MRCLRRRESRYHDDFPEGPPYRPGGRSPERSARHEDRMKRRLDGVPGWLALNAPLVLAAIGLLAGCTTFASQHEKRADAL
LQPTVGNQARGTVTLAERPDGVQVTYNFAGLPPNSDHALQIHERGDCNAADGSSAGVVFAPAADRLRAGARVGGDLGNIH
ADANGVAAGFITAPDVALDGVRSVLGRSVLVHRDPGDPAFPQHGAGPALACGVVRQ
>Mature_216_residues
MRCLRRRESRYHDDFPEGPPYRPGGRSPERSARHEDRMKRRLDGVPGWLALNAPLVLAAIGLLAGCTTFASQHEKRADAL
LQPTVGNQARGTVTLAERPDGVQVTYNFAGLPPNSDHALQIHERGDCNAADGSSAGVVFAPAADRLRAGARVGGDLGNIH
ADANGVAAGFITAPDVALDGVRSVLGRSVLVHRDPGDPAFPQHGAGPALACGVVRQ

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 22756; Mature: 22756

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCLRRRESRYHDDFPEGPPYRPGGRSPERSARHEDRMKRRLDGVPGWLALNAPLVLAAI
CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH
GLLAGCTTFASQHEKRADALLQPTVGNQARGTVTLAERPDGVQVTYNFAGLPPNSDHALQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEE
IHERGDCNAADGSSAGVVFAPAADRLRAGARVGGDLGNIHADANGVAAGFITAPDVALDG
EECCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCEECCCCCEEEEEEECCHHHHHH
VRSVLGRSVLVHRDPGDPAFPQHGAGPALACGVVRQ
HHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MRCLRRRESRYHDDFPEGPPYRPGGRSPERSARHEDRMKRRLDGVPGWLALNAPLVLAAI
CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH
GLLAGCTTFASQHEKRADALLQPTVGNQARGTVTLAERPDGVQVTYNFAGLPPNSDHALQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEE
IHERGDCNAADGSSAGVVFAPAADRLRAGARVGGDLGNIHADANGVAAGFITAPDVALDG
EECCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCEECCCCCEEEEEEECCHHHHHH
VRSVLGRSVLVHRDPGDPAFPQHGAGPALACGVVRQ
HHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]