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The map label for this gene is yfdE [H]

Identifier: 83721042

GI number: 83721042

Start: 3037643

End: 3038863

Strand: Direct

Name: yfdE [H]

Synonym: BTH_I2662

Alternate gene names: 83721042

Gene position: 3037643-3038863 (Clockwise)

Preceding gene: 83719216

Following gene: 83720086

Centisome position: 79.74

GC content: 70.43

Gene sequence:

>1221_bases
ATGGGAACCCTCAGCCATATCCGCGTCCTGGACCTGAGCCGCGTGCTCGCCGGCCCGTGGTGCGCGCAGACGCTTGCCGA
TCTCGGCGCCGACGTGATCAAGGTCGAGCGCCCGGAACTCGGCGACGACACCCGGCACTGGGGCCCGCCGTACCTGAAAA
CGCCGGACGGCGCCGACACGCGCGAGGCCGCGTACTACCTCGCCGCGAACCGCAACAAGCGCTCGGTGACGGTCGACATC
GCGACGCCCGAGGGCCAGCGGATCGTCCGCGAGCTCGCCGCGCAATGCGATGTCGTGCTCGAGAACTACAAGGTCGGCCA
GCTCGCGAAATACGGGCTCGACTATGCGTCGCTCGCGGCCGTAAAGCCCGATCTCGTCTACTGCTCGGTGACGGGCTTCG
GCCAGACGGGCCCGTACGCGCACCGCGCCGGGTACGACTTCATCATCCAGGGGATGGGCGGCTTCATGAGCATCACGGGC
GAGCGCGACGGCCTGCCGGGCGGCGGTCCGCAGAAGGCGGGCGTCGCGATCGCCGATCTCGCGACGGGCCTCTATTCGAC
GATCGCGATCCTCGCCGCGCTCGCGCACCGCGACCGCACGGGTTGCGGCCAGCACATCGACATGGCGCTCCTCGACGTGC
AGGTCGCGCTCCTCGCGAACATGAACACGAACTTCCTCGCGAGCGGCAAGCCGCCGGTGCGCTGGGGCAACGCGCATCCG
AACATCGTGCCGTACCAGACGTTCGAGACGAGCGACGGCTGGATCATCGTCGCGGTCGGCAACGACGGCCAGTTCCGCAA
GTTCGTCGACGCGGGCGGGCGGGCGGAGCTCGCCGACGACGCGCGCTTCGCGACGAATCCGGCGCGCGTGCGCCATCGCG
ACACGCTCGTGCCGATCATCGCGGAGATGACGAAGACGCGCACGAAGCGCGAGTGGCTCGACGCGCTCGAGGCGCTCGGC
GTGCCGTGCGGGCCGATCAACGATCTCGCCGAAGTATTCGACGACGAGCAGGTGCGCGCGCGGGGCATGCAGGTCGAGCT
GCCGCACCCGAGCGGCGCGACCGTGAAGCTCGTGCGCAACCCGATCCGGATGAGCGAGACGCCGCCCGACGCGCGCAGCG
CGCCGCCGCTCCTCGGCGAGCATACGGACGCGGTGCTGCGCGACATGCTCGGCTACGGCGACGCGGCGATCGCGGCGCTT
CGCGACAAGCGCGTCGTCTGA

Upstream 100 bases:

>100_bases
AACCCAACCCGGCGCCCGCCCGCGCGATCGCGCCATGCCCGGCGCGATGCCTGCGCGCGCGCCGGCCGATAGCGCAGCCA
ACAGAGGAGACTGATCGAAG

Downstream 100 bases:

>100_bases
ACGCGGCGGGCGGGCGCGCGCCGACATCGCACCGTCATGGCCAATCGGTACAAAGCGGGCTATCCCGCTTTTTTCCGCCG
AGGTTGCGCATGTCGTCACG

Product: CAIB/BAIF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MGTLSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPELGDDTRHWGPPYLKTPDGADTREAAYYLAANRNKRSVTVDI
ATPEGQRIVRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKPDLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITG
ERDGLPGGGPQKAGVAIADLATGLYSTIAILAALAHRDRTGCGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHP
NIVPYQTFETSDGWIIVAVGNDGQFRKFVDAGGRAELADDARFATNPARVRHRDTLVPIIAEMTKTRTKREWLDALEALG
VPCGPINDLAEVFDDEQVRARGMQVELPHPSGATVKLVRNPIRMSETPPDARSAPPLLGEHTDAVLRDMLGYGDAAIAAL
RDKRVV

Sequences:

>Translated_406_residues
MGTLSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPELGDDTRHWGPPYLKTPDGADTREAAYYLAANRNKRSVTVDI
ATPEGQRIVRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKPDLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITG
ERDGLPGGGPQKAGVAIADLATGLYSTIAILAALAHRDRTGCGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHP
NIVPYQTFETSDGWIIVAVGNDGQFRKFVDAGGRAELADDARFATNPARVRHRDTLVPIIAEMTKTRTKREWLDALEALG
VPCGPINDLAEVFDDEQVRARGMQVELPHPSGATVKLVRNPIRMSETPPDARSAPPLLGEHTDAVLRDMLGYGDAAIAAL
RDKRVV
>Mature_405_residues
GTLSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPELGDDTRHWGPPYLKTPDGADTREAAYYLAANRNKRSVTVDIA
TPEGQRIVRELAAQCDVVLENYKVGQLAKYGLDYASLAAVKPDLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGE
RDGLPGGGPQKAGVAIADLATGLYSTIAILAALAHRDRTGCGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHPN
IVPYQTFETSDGWIIVAVGNDGQFRKFVDAGGRAELADDARFATNPARVRHRDTLVPIIAEMTKTRTKREWLDALEALGV
PCGPINDLAEVFDDEQVRARGMQVELPHPSGATVKLVRNPIRMSETPPDARSAPPLLGEHTDAVLRDMLGYGDAAIAALR
DKRVV

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=403, Percent_Identity=44.4168734491315, Blast_Score=356, Evalue=2e-98,
Organism=Homo sapiens, GI300863124, Length=429, Percent_Identity=41.7249417249417, Blast_Score=342, Evalue=3e-94,
Organism=Homo sapiens, GI300863126, Length=403, Percent_Identity=38.4615384615385, Blast_Score=296, Evalue=2e-80,
Organism=Homo sapiens, GI13376042, Length=429, Percent_Identity=37.995337995338, Blast_Score=290, Evalue=1e-78,
Organism=Homo sapiens, GI42794625, Length=412, Percent_Identity=26.4563106796117, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI266456254, Length=412, Percent_Identity=26.4563106796117, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI266458397, Length=272, Percent_Identity=30.8823529411765, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI266458393, Length=272, Percent_Identity=30.8823529411765, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI266458395, Length=162, Percent_Identity=30.8641975308642, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI42822893, Length=162, Percent_Identity=30.8641975308642, Blast_Score=83, Evalue=4e-16,
Organism=Escherichia coli, GI87082093, Length=364, Percent_Identity=35.7142857142857, Blast_Score=231, Evalue=9e-62,
Organism=Escherichia coli, GI1788717, Length=425, Percent_Identity=32, Blast_Score=190, Evalue=2e-49,
Organism=Escherichia coli, GI1786222, Length=411, Percent_Identity=23.8442822384428, Blast_Score=81, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115535051, Length=333, Percent_Identity=26.1261261261261, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32564160, Length=343, Percent_Identity=24.7813411078717, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24648431, Length=403, Percent_Identity=47.8908188585608, Blast_Score=375, Evalue=1e-104,
Organism=Drosophila melanogaster, GI24585488, Length=355, Percent_Identity=27.887323943662, Blast_Score=119, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 43799; Mature: 43668

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTLSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPELGDDTRHWGPPYLKTPDGADT
CCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCH
REAAYYLAANRNKRSVTVDIATPEGQRIVRELAAQCDVVLENYKVGQLAKYGLDYASLAA
HHHEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
VKPDLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADL
CCCCEEEEEEECCCCCCCCHHHCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEHHHH
ATGLYSTIAILAALAHRDRTGCGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHP
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCC
NIVPYQTFETSDGWIIVAVGNDGQFRKFVDAGGRAELADDARFATNPARVRHRDTLVPII
CCCCEEEEECCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHH
AEMTKTRTKREWLDALEALGVPCGPINDLAEVFDDEQVRARGMQVELPHPSGATVKLVRN
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHCCCEEECCCCCCCEEEEECC
PIRMSETPPDARSAPPLLGEHTDAVLRDMLGYGDAAIAALRDKRVV
CHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
GTLSHIRVLDLSRVLAGPWCAQTLADLGADVIKVERPELGDDTRHWGPPYLKTPDGADT
CCCHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCH
REAAYYLAANRNKRSVTVDIATPEGQRIVRELAAQCDVVLENYKVGQLAKYGLDYASLAA
HHHEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
VKPDLVYCSVTGFGQTGPYAHRAGYDFIIQGMGGFMSITGERDGLPGGGPQKAGVAIADL
CCCCEEEEEEECCCCCCCCHHHCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEHHHH
ATGLYSTIAILAALAHRDRTGCGQHIDMALLDVQVALLANMNTNFLASGKPPVRWGNAHP
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCC
NIVPYQTFETSDGWIIVAVGNDGQFRKFVDAGGRAELADDARFATNPARVRHRDTLVPII
CCCCEEEEECCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHH
AEMTKTRTKREWLDALEALGVPCGPINDLAEVFDDEQVRARGMQVELPHPSGATVKLVRN
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHCCCEEECCCCCCCEEEEECC
PIRMSETPPDARSAPPLLGEHTDAVLRDMLGYGDAAIAALRDKRVV
CHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]