Click here to switch to the map view.

The map label for this gene is yhbY [C]

Identifier: 83721041

GI number: 83721041

Start: 3191465

End: 3192010

Strand: Direct

Name: yhbY [C]

Synonym: BTH_I2778

Alternate gene names: 83721041

Gene position: 3191465-3192010 (Clockwise)

Preceding gene: 83721168

Following gene: 83719148

Centisome position: 83.78

GC content: 70.15

Gene sequence:

>546_bases
ATGCCCGCCCTTTCGCTTTCCCCCGCCGAGCGCTCCGCGCTGCGTTCCGAAGCCCATGCGCTCAAGCCCGTCGTGCTGAT
CGGCGCCGAAGGGCTGACCGACGCCGTGCTCGCCGAGATCGAGGTTCACCTCGCCGCGCACCAACTGATCAAGATTCGCG
TGTTCGGCGACGAGCGCGACGAGCGCGTCGCGATCTATGACGAAATCTGCGACCGCCTGAACGCGGCGCCGATCCAGCAC
ATCGGCAAGCTGCTCGTGATCTGGAAGCCCGAGCAGGCCGAAGCGGCGCCGCAGCGCGGCCGCCGCGGCGTGCCCAGCGC
GCGCGAAGCGGCCCGCGCGGGCGCCGCGCAACCCGAGGTCGCGAAAGGCCGTGCGCCGCGCGTCGTCAAGGTGGTCAAAC
AATCGCCGAACGCGCCCGCCGTGCGCCGCCCGAAGCCGCAGAAAGTGCGCGTGCTCGGCAACGAGCGCGTGACGGCGGGC
GGCAACGTGAAGCGCGCGAAGAAACGCCAGTCGAGCGCGAAGCGTCAGCACCAGAACGAGAAGTAA

Upstream 100 bases:

>100_bases
CAAGCCGCGATTTTACGTGGTTTCGGCGCGCCGCCGCGGAAAAGCTTCGTCGCTCGTCCCGGCTTGCCCGCCGTCAATTT
GATTCGAATTCCTCATTCCG

Downstream 100 bases:

>100_bases
TCGCTTATCGGACGCGTCGCACGGCCTGATCGGCCGGTCGACGGGCCCGCGCACGAGGCGCGCCGGCCGCGTGCACAGGC
TCAGGCGCGCCGCTCGCCGT

Product: CRS1/YhbY domain-contain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MPALSLSPAERSALRSEAHALKPVVLIGAEGLTDAVLAEIEVHLAAHQLIKIRVFGDERDERVAIYDEICDRLNAAPIQH
IGKLLVIWKPEQAEAAPQRGRRGVPSAREAARAGAAQPEVAKGRAPRVVKVVKQSPNAPAVRRPKPQKVRVLGNERVTAG
GNVKRAKKRQSSAKRQHQNEK

Sequences:

>Translated_181_residues
MPALSLSPAERSALRSEAHALKPVVLIGAEGLTDAVLAEIEVHLAAHQLIKIRVFGDERDERVAIYDEICDRLNAAPIQH
IGKLLVIWKPEQAEAAPQRGRRGVPSAREAARAGAAQPEVAKGRAPRVVKVVKQSPNAPAVRRPKPQKVRVLGNERVTAG
GNVKRAKKRQSSAKRQHQNEK
>Mature_180_residues
PALSLSPAERSALRSEAHALKPVVLIGAEGLTDAVLAEIEVHLAAHQLIKIRVFGDERDERVAIYDEICDRLNAAPIQHI
GKLLVIWKPEQAEAAPQRGRRGVPSAREAARAGAAQPEVAKGRAPRVVKVVKQSPNAPAVRRPKPQKVRVLGNERVTAGG
NVKRAKKRQSSAKRQHQNEK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=87, Percent_Identity=42.5287356321839, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 19712; Mature: 19581

Theoretical pI: Translated: 11.33; Mature: 11.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALSLSPAERSALRSEAHALKPVVLIGAEGLTDAVLAEIEVHLAAHQLIKIRVFGDERD
CCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCC
ERVAIYDEICDRLNAAPIQHIGKLLVIWKPEQAEAAPQRGRRGVPSAREAARAGAAQPEV
CEEEHHHHHHHHCCCCCHHHCCCEEEEECCCHHHHCHHCCCCCCCHHHHHHHCCCCCCCH
AKGRAPRVVKVVKQSPNAPAVRRPKPQKVRVLGNERVTAGGNVKRAKKRQSSAKRQHQNE
HCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHCCC
K
C
>Mature Secondary Structure 
PALSLSPAERSALRSEAHALKPVVLIGAEGLTDAVLAEIEVHLAAHQLIKIRVFGDERD
CCCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCC
ERVAIYDEICDRLNAAPIQHIGKLLVIWKPEQAEAAPQRGRRGVPSAREAARAGAAQPEV
CEEEHHHHHHHHCCCCCHHHCCCEEEEECCCHHHHCHHCCCCCCCHHHHHHHCCCCCCCH
AKGRAPRVVKVVKQSPNAPAVRRPKPQKVRVLGNERVTAGGNVKRAKKRQSSAKRQHQNE
HCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]