| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yfeH [C]
Identifier: 83721040
GI number: 83721040
Start: 335246
End: 336430
Strand: Reverse
Name: yfeH [C]
Synonym: BTH_I0302
Alternate gene names: 83721040
Gene position: 336430-335246 (Counterclockwise)
Preceding gene: 83721565
Following gene: 83718421
Centisome position: 8.83
GC content: 69.2
Gene sequence:
>1185_bases ATGCATTCGAGTCATCAATCGATTCTTCGAATGAATTTGCCTATTCAATCCCCGGCCGCGACAATATCGGACCGACAACC GCCGCACCGCCCGCCCCGCGGGCCGTGGCGCATCCACCGCATTCGACCGAGACCCGAGATGGCGCGCTCCCGCTTCGTTC CCGACAACTTCACGCTCGCGCTCGTCGGCACCGTCGTGCTCGCGAGCTTCCTGCCGTGCCGCGGCGAGGCCGCGCACGCG TTCAACTGGGCGACCGACATCGCGGTCGGCCTGCTGTTCTTCCTGCACGGCGCGAAGCTGTCGCGCGAGGCGATCATTGC GGGCGCGACGCACTGGCGGCTGCACGTGGTCGTGCTGCTCAGCACGTTCGCGCTGTTCCCGCTGCTCGGCCTCGCGCTCA AGCCCGTGCTCACGCCGCTCGTCACGCCCGCGCTGTACGCCGGCGTGCTGTTCCTCTGCACGCTGCCGTCCACCGTGCAG TCGTCGATCGCGTTCACGTCGATCGCGAAGGGCAACGTGCCGGCCGCCGTGTGCTCGGCGTCCGCATCGAGCCTGCTCGG CATCTTCGTCACGCCGGCGCTCGTCGGCGTGATGGTGTCGACGCAGGGCACGGGCGCGACGGCGTCGCCTTGGAGCACGA TCGGCGCGATCGTCATGCAGTTGCTCGTGCCGTTCCTCGCCGGCCAGTTGCTGCGGCCCGTGATCGGCGGCTGGATCGAG CGCAATCGCGGCGTGCTGCGCTTCGTCGATCAGGGCTCGATCCTGCTCGTCGTCTACGTCGCGTTCAGCGAGGCCGTGAA CGAAGGGCTCTGGCACCAGATTCCGCCGATGGCGCTCGCGGGCCTCGTCGTCGTCAACGTCGTGCTGCTCGCGATCGCGC TCGCGGTCACGACGATCGTCAGCAAGCGGCTCGGCTTCAACCGCGCGGACCAGATCACGATCATCTTCTGCGGCTCGAAG AAGAGCCTCGCGGCCGGCGTGCCGATGGCGAAGGTGATCTTCGCCGCGCACGCGGTCGGCGCGATCGTGCTGCCGCTGAT GCTGTTCCACCAGATCCAGCTGATGACCTGCGCGGCGCTTGCGCAGCGCTGGGGAGCGCGCGACACGAGCCGCGAGCGGC AGCCGGGCGCGCACGGCGGCCGGGCGATCGGCTCCGGCGCGAACGCGAGCGCGGCGAAACGCTGA
Upstream 100 bases:
>100_bases TGGCTTTTGCCGATTCCGCGCACGTTTTCCGAGCGCGCGCGCCGCCGGTTTTCGATCCTTTCCGCCGTAAGGTTGCGATG CGCGGGAAGCGCGCATCGGC
Downstream 100 bases:
>100_bases GCAACGGGCGCGGCGAAGCGGGCTTGCGCCAGCCGCGCCGCGCTCGCGCCGCCAAAGCTTCGCAGCGGGGCGCTTCCCCG TTTTCGGGGCGCGCAGGGCT
Product: sodium/bile acid symporter family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MHSSHQSILRMNLPIQSPAATISDRQPPHRPPRGPWRIHRIRPRPEMARSRFVPDNFTLALVGTVVLASFLPCRGEAAHA FNWATDIAVGLLFFLHGAKLSREAIIAGATHWRLHVVVLLSTFALFPLLGLALKPVLTPLVTPALYAGVLFLCTLPSTVQ SSIAFTSIAKGNVPAAVCSASASSLLGIFVTPALVGVMVSTQGTGATASPWSTIGAIVMQLLVPFLAGQLLRPVIGGWIE RNRGVLRFVDQGSILLVVYVAFSEAVNEGLWHQIPPMALAGLVVVNVVLLAIALAVTTIVSKRLGFNRADQITIIFCGSK KSLAAGVPMAKVIFAAHAVGAIVLPLMLFHQIQLMTCAALAQRWGARDTSRERQPGAHGGRAIGSGANASAAKR
Sequences:
>Translated_394_residues MHSSHQSILRMNLPIQSPAATISDRQPPHRPPRGPWRIHRIRPRPEMARSRFVPDNFTLALVGTVVLASFLPCRGEAAHA FNWATDIAVGLLFFLHGAKLSREAIIAGATHWRLHVVVLLSTFALFPLLGLALKPVLTPLVTPALYAGVLFLCTLPSTVQ SSIAFTSIAKGNVPAAVCSASASSLLGIFVTPALVGVMVSTQGTGATASPWSTIGAIVMQLLVPFLAGQLLRPVIGGWIE RNRGVLRFVDQGSILLVVYVAFSEAVNEGLWHQIPPMALAGLVVVNVVLLAIALAVTTIVSKRLGFNRADQITIIFCGSK KSLAAGVPMAKVIFAAHAVGAIVLPLMLFHQIQLMTCAALAQRWGARDTSRERQPGAHGGRAIGSGANASAAKR >Mature_394_residues MHSSHQSILRMNLPIQSPAATISDRQPPHRPPRGPWRIHRIRPRPEMARSRFVPDNFTLALVGTVVLASFLPCRGEAAHA FNWATDIAVGLLFFLHGAKLSREAIIAGATHWRLHVVVLLSTFALFPLLGLALKPVLTPLVTPALYAGVLFLCTLPSTVQ SSIAFTSIAKGNVPAAVCSASASSLLGIFVTPALVGVMVSTQGTGATASPWSTIGAIVMQLLVPFLAGQLLRPVIGGWIE RNRGVLRFVDQGSILLVVYVAFSEAVNEGLWHQIPPMALAGLVVVNVVLLAIALAVTTIVSKRLGFNRADQITIIFCGSK KSLAAGVPMAKVIFAAHAVGAIVLPLMLFHQIQLMTCAALAQRWGARDTSRERQPGAHGGRAIGSGANASAAKR
Specific function: Unknown
COG id: COG0385
COG function: function code R; Predicted Na+-dependent transporter
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfeH [H]
Homologues:
Organism=Homo sapiens, GI71725371, Length=297, Percent_Identity=28.2828282828283, Blast_Score=114, Evalue=1e-25, Organism=Escherichia coli, GI1788749, Length=331, Percent_Identity=54.6827794561934, Blast_Score=324, Evalue=5e-90, Organism=Saccharomyces cerevisiae, GI6323677, Length=398, Percent_Identity=21.608040201005, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002657 - InterPro: IPR016833 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 41819; Mature: 41819
Theoretical pI: Translated: 11.86; Mature: 11.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSSHQSILRMNLPIQSPAATISDRQPPHRPPRGPWRIHRIRPRPEMARSRFVPDNFTLA CCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCHHHH LVGTVVLASFLPCRGEAAHAFNWATDIAVGLLFFLHGAKLSREAIIAGATHWRLHVVVLL HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCHHHHHHHHHHH STFALFPLLGLALKPVLTPLVTPALYAGVLFLCTLPSTVQSSIAFTSIAKGNVPAAVCSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH SASSLLGIFVTPALVGVMVSTQGTGATASPWSTIGAIVMQLLVPFLAGQLLRPVIGGWIE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNRGVLRFVDQGSILLVVYVAFSEAVNEGLWHQIPPMALAGLVVVNVVLLAIALAVTTIV CCCCEEEEECCCCEEEHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SKRLGFNRADQITIIFCGSKKSLAAGVPMAKVIFAAHAVGAIVLPLMLFHQIQLMTCAAL HHHHCCCCCCEEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQRWGARDTSRERQPGAHGGRAIGSGANASAAKR HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHSSHQSILRMNLPIQSPAATISDRQPPHRPPRGPWRIHRIRPRPEMARSRFVPDNFTLA CCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCHHHH LVGTVVLASFLPCRGEAAHAFNWATDIAVGLLFFLHGAKLSREAIIAGATHWRLHVVVLL HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCHHHHHHHHHHH STFALFPLLGLALKPVLTPLVTPALYAGVLFLCTLPSTVQSSIAFTSIAKGNVPAAVCSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH SASSLLGIFVTPALVGVMVSTQGTGATASPWSTIGAIVMQLLVPFLAGQLLRPVIGGWIE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNRGVLRFVDQGSILLVVYVAFSEAVNEGLWHQIPPMALAGLVVVNVVLLAIALAVTTIV CCCCEEEEECCCCEEEHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SKRLGFNRADQITIIFCGSKKSLAAGVPMAKVIFAAHAVGAIVLPLMLFHQIQLMTCAAL HHHHCCCCCCEEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQRWGARDTSRERQPGAHGGRAIGSGANASAAKR HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043; 1849605 [H]