| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is mreC [H]
Identifier: 83720997
GI number: 83720997
Start: 175384
End: 176463
Strand: Reverse
Name: mreC [H]
Synonym: BTH_I0145
Alternate gene names: 83720997
Gene position: 176463-175384 (Counterclockwise)
Preceding gene: 83721495
Following gene: 83720077
Centisome position: 4.63
GC content: 70.93
Gene sequence:
>1080_bases ATGGAATACAGTCCGCCGCCTCTCTTCAAGCAAGGTCCGTCCGCGCTCGCGCGGCTGATCTTCTTCGTCGTCCTGGCGAT CGCGCTCCTCGTCTCGGACGCGCGCTTCAACACGCTCGAAATCGCCCGCGGCGTGCTCGGCACCGTGCTCTATCCGCTGC AGCGCGCGGCGCTCGTGCCGCGCGACCTGATCGTCGGCGCGGCCGAGCTCGCGACGTCGAGCACGGCGCTGCGCCACGAA AACCAGCAATTGCGCGACCGCAACCTGAAGCTGTCGCTGCAGGCGAACCAGGCGGGCCAGCTCGCCGCCGACAACGCGCA CCTGCGCGCGGTGCTCGAGCTGCGCCAGCAGATCGCCACGCAGGCGACGCCCGTCGAGATCCAGTACGACACGGGCGATC CGTTCTCGCAGAAGATCATCATCGGCCACGGCTCGCAAGCGGGCATCCAGAACGGCGCGCCCGTCGTCAGCGAGGACGGC GTGATCGGCCAGGTCACCCGCGTGTTTCCGCTGCAGTCGGAAGTCACGCTCGTCACCGACCGCGACCTCGCGATTCCGGT GCAGGTGCTGCGCACCGGGCTGCGCAGCGTGATCTACGGCACGCCGAAGGGCGATGCGCTCGATCTGCGCTTCGTGCCGA CGAGCGCCGATCTGCTCGCGGGCGACGAACTCGTGACGAGCGGCCTCGACGGCGTCTATCCGCCGGGGCTGCCGGTCGCG AAGGTCGTGCGCGTCGACAAGCTCGCCGATACGGCGTTCGCGCACGTCATTTGCGCGCCGATTGCGGCGGTGCGCGGCGC GCGCGAGATGCTCGTGCTGCACTACCGCACCGACATCCCGCCGCGGCCCGCCACCGACGACGCCGCGAGCGATGCGAAGA CGGCGAAGGGCAAAAAGGCGGCGAAGGGCGCGGACAAGAACGCGAAGGCCGCCGATAAAGGCGCGGCGAAGGGCGCGGAC AAAGGCGCGAAGCCGGCCGCCCCGCCACCCGCGCCCGCGCAGAACCGGCCGGCCGCAGCGGCGCAACCCGCCGCTTTGCT CAAGCCCGCGGCCGCGCCGTCGCAAGGAGCGCCGCGATGA
Upstream 100 bases:
>100_bases TCGCTCGCGCGGCGTGGCAGGCTCGCTCGTTTAGAACGAACCGCCGCGCCGTTCGTGCGTCTGAGCAACATCTAAATCGA TCACGCGCCCGGCGCCGACC
Downstream 100 bases:
>100_bases GCCGCCCTCAGTACATCCTGCAGCCCGTCAATCCGTACTTCATCGTCTTCAGCCTCGCGGCCGCGTTCCTGCTGAACCTG ATGCCGTGGGGCCGGATTCC
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MEYSPPPLFKQGPSALARLIFFVVLAIALLVSDARFNTLEIARGVLGTVLYPLQRAALVPRDLIVGAAELATSSTALRHE NQQLRDRNLKLSLQANQAGQLAADNAHLRAVLELRQQIATQATPVEIQYDTGDPFSQKIIIGHGSQAGIQNGAPVVSEDG VIGQVTRVFPLQSEVTLVTDRDLAIPVQVLRTGLRSVIYGTPKGDALDLRFVPTSADLLAGDELVTSGLDGVYPPGLPVA KVVRVDKLADTAFAHVICAPIAAVRGAREMLVLHYRTDIPPRPATDDAASDAKTAKGKKAAKGADKNAKAADKGAAKGAD KGAKPAAPPPAPAQNRPAAAAQPAALLKPAAAPSQGAPR
Sequences:
>Translated_359_residues MEYSPPPLFKQGPSALARLIFFVVLAIALLVSDARFNTLEIARGVLGTVLYPLQRAALVPRDLIVGAAELATSSTALRHE NQQLRDRNLKLSLQANQAGQLAADNAHLRAVLELRQQIATQATPVEIQYDTGDPFSQKIIIGHGSQAGIQNGAPVVSEDG VIGQVTRVFPLQSEVTLVTDRDLAIPVQVLRTGLRSVIYGTPKGDALDLRFVPTSADLLAGDELVTSGLDGVYPPGLPVA KVVRVDKLADTAFAHVICAPIAAVRGAREMLVLHYRTDIPPRPATDDAASDAKTAKGKKAAKGADKNAKAADKGAAKGAD KGAKPAAPPPAPAQNRPAAAAQPAALLKPAAAPSQGAPR >Mature_359_residues MEYSPPPLFKQGPSALARLIFFVVLAIALLVSDARFNTLEIARGVLGTVLYPLQRAALVPRDLIVGAAELATSSTALRHE NQQLRDRNLKLSLQANQAGQLAADNAHLRAVLELRQQIATQATPVEIQYDTGDPFSQKIIIGHGSQAGIQNGAPVVSEDG VIGQVTRVFPLQSEVTLVTDRDLAIPVQVLRTGLRSVIYGTPKGDALDLRFVPTSADLLAGDELVTSGLDGVYPPGLPVA KVVRVDKLADTAFAHVICAPIAAVRGAREMLVLHYRTDIPPRPATDDAASDAKTAKGKKAAKGADKNAKAADKGAAKGAD KGAKPAAPPPAPAQNRPAAAAQPAALLKPAAAPSQGAPR
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
Organism=Escherichia coli, GI1789648, Length=259, Percent_Identity=35.5212355212355, Blast_Score=135, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 37482; Mature: 37482
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYSPPPLFKQGPSALARLIFFVVLAIALLVSDARFNTLEIARGVLGTVLYPLQRAALVP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC RDLIVGAAELATSSTALRHENQQLRDRNLKLSLQANQAGQLAADNAHLRAVLELRQQIAT HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCCHHHHHHHHHHHHHHH QATPVEIQYDTGDPFSQKIIIGHGSQAGIQNGAPVVSEDGVIGQVTRVFPLQSEVTLVTD CCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEECCCCEEHHHHEEECCCCEEEEEC RDLAIPVQVLRTGLRSVIYGTPKGDALDLRFVPTSADLLAGDELVTSGLDGVYPPGLPVA CCCCCHHHHHHHHHHHHEECCCCCCEEEEEEECCCCHHHCCHHHHHCCCCCCCCCCCCHH KVVRVDKLADTAFAHVICAPIAAVRGAREMLVLHYRTDIPPRPATDDAASDAKTAKGKKA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCCCCCHHHHCCCHH AKGADKNAKAADKGAAKGADKGAKPAAPPPAPAQNRPAAAAQPAALLKPAAAPSQGAPR HCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MEYSPPPLFKQGPSALARLIFFVVLAIALLVSDARFNTLEIARGVLGTVLYPLQRAALVP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC RDLIVGAAELATSSTALRHENQQLRDRNLKLSLQANQAGQLAADNAHLRAVLELRQQIAT HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCCHHHHHHHHHHHHHHH QATPVEIQYDTGDPFSQKIIIGHGSQAGIQNGAPVVSEDGVIGQVTRVFPLQSEVTLVTD CCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEECCCCEEHHHHEEECCCCEEEEEC RDLAIPVQVLRTGLRSVIYGTPKGDALDLRFVPTSADLLAGDELVTSGLDGVYPPGLPVA CCCCCHHHHHHHHHHHHEECCCCCCEEEEEEECCCCHHHCCHHHHHCCCCCCCCCCCCHH KVVRVDKLADTAFAHVICAPIAAVRGAREMLVLHYRTDIPPRPATDDAASDAKTAKGKKA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCCCCCHHHHCCCHH AKGADKNAKAADKGAAKGADKGAKPAAPPPAPAQNRPAAAAQPAALLKPAAAPSQGAPR HCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2687239; 9278503; 3049542 [H]