| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720983
Identifier: 83720983
GI number: 83720983
Start: 3114998
End: 3116917
Strand: Reverse
Name: 83720983
Synonym: BTH_I2719
Alternate gene names: NA
Gene position: 3116917-3114998 (Counterclockwise)
Preceding gene: 83719658
Following gene: 83720284
Centisome position: 81.83
GC content: 59.84
Gene sequence:
>1920_bases ATGACGGTCGCCGACGATCAATTCGATGCCGAGGCCGACGCAACGATCATCGCATGTCTTGACCTGAGCAAGCCCAGAAG CTTTTTCCTGTACGCAGGTGCTGGATCAGGGAAGACGCGATCACTGGTCAGCGCCGTCAGAAAGACGATCGATGGCGAGC ACGGGCGGCAACTTACCCTGACCGGCAAGAAGGTTGGTGTCATCACCTACACCAACGCCGCTTGCGACGAAATCAAGCAA CGCCTTGAATTCGATTCTCGCGTTGAGGTCATGACGATCCATGCCTTCTCATGGTCGCTGATCGAGGGCTTCAACGCCGA CATCCGTCAGTGGGTCGCCAAGAACCTTGAAGAGGAGATTGCAGAGCTTGAGGAGCAGCACAAGAAGGGGCGCCCCAACA CGAAAGCGGGCGTTGAACGGCTTCGATCCATGGAGAGCAAACGTCGCCGCCTGGCGCGTCTGGATTCCGTCGTTAAGTTC ATCTACAGCCCGACCAGCGACAACCGAACACGCGACTCTCTGAACCACTCGGAGGTTATCGCCATGACGGCGGCCTTCCT GACCAGCAAACCTGGACTGCGGCGGATGTTGGTCAGCAGGTGTCCGGTCTTGCTCATTGATGAAAGCCAGGACACGAACA AGGCGCTCATGGACGCCTTCCTGCATCTTGAGGAAGAGTTCCATGGTCGGTTCAGCCTCGGGCTTTTCGGGGACTTGATG CAGCGCATCTACTCGGACGGAAAAGAGCGGCTTGACAAGGCCATCCCGGCCAGGTGGGCTATGCCTCGCAAGCGGATGAA CCACCGGTGCCCATCCCGCGTCGTCGAGGTTATCAACAGCATCCGCCGCGATGTCGATGGCGAGGAACAGGTCCCCCGCA GCGACGCTGAAAAGGGTGTGGTCCGGGTCTTCATCGCGCCCCAAGCGGGCGCCGACCCCTTCGCCATTGAAGCGGCCGTA CGCCAGCGTATGGCGACGATTGCTGGTGACCCGGCCTGGCAGAACTCTGACACGGTGAAGACGCTCGCCCTTGAGCACCT GATGTCTGCCAGGCGATTCGGTTTCGCGGAATTCTTCGAGCCGCTTTGGGCGATCGACAACCTCCGGACGAGCCTGCTTC AAGGCGCCGGAGCAGGTCTTGGGTTCTTCATCAGGGACGTGTTGCCGCTGGTCAATGCACTTCGTGCCAACGACCGCTTC GCGGCTACTGCGATCGTCAAGGCGTCGTCGCCCCTTCTGGATCGCGCAGCGCTTCAAGAGGCTGGATCGAATCAGGTCGC GCAGCTCGGTAAGGCTAAGGCGGCGTGCGACGGGCTTCTTGCGCTGATCACGGAACAGCCTGAGATCAATGCTCAGGCAG TGCTCGAGTTTGTTGCGCAGACGGGTCTGTTTTCCATCCCGGACACGCTTGCTCCCTTCGTTTCCGGTGACGCCAAGGCG GTAGCGGCCGAGGACAACGCAGGGCAGGGCGATCAGATGGAGCGCACCGAGGACGGAGAAGCCGAAGACACCAGTCCTGA GCTGAGCGCATGGAGCAAAGCCCTTGAGGCGCCACTGAGCCAGATCGAGCGTTACGACTTGTACGCGCGAGGACAGTCGC AATTCGCGACGCATCAGGGCGTCAAGGGGCTTGAGTTCCCGCGCGTATTGGTCGTGATCAATGACGACGAGGCGCGAGGT TTTCTTTTTGCCTACGACAAATTCTTCGGTACCAAGGAGAAGTCAAAGGCGGACCTTGAAAACGAAGCCGCCGGCCGAGA GACCGGTTCGGACCGCACTCGCCGCTTGTTCTATGTGACCTGCAGCCGGGCAGAGAAGAGCTTGGCCATCGTCTACTACT CGCCGGATCCAGCGCTGGCTCGCAGTGCGATCCTACAGTACGGATGGTTCGTACAAGACGAGGTCGAACTGATCAACTGA
Upstream 100 bases:
>100_bases TGAAACAGATGGAGAAGAAGCAGGTGGAAATCTTGACGACGGCGCCGGCCACGGCCGTTTCAGTTGCTACCGCCGCGAGT CCTGGGCCGGGAGCGAAGCC
Downstream 100 bases:
>100_bases ATCGACGCAGCCCGAGATTACCAGCGCCCCGAATGCCTCTGCATGAAGTTCGCCATCCGACCAGTTGTCGGCGATGGCGA GAGGCAGCAATCGGCCAGTT
Product: pathogenesis-like protein
Products: NA
Alternate protein names: Pathogenesis-Related Protein; UvrD/REP Helicase; ATP-Dependent DNA Helicase; Superfamily I DNA And RNA Helicase-Like Protein; ATP-Dependent DNA Helicase UvrD/REP Family; Superfamily I DNA/RNA Helicase-Like Protein; DNA Helicase; ATP-Dependent DNA Helicase Pcra; Superfamily I DNA/RNA Helicase
Number of amino acids: Translated: 639; Mature: 638
Protein sequence:
>639_residues MTVADDQFDAEADATIIACLDLSKPRSFFLYAGAGSGKTRSLVSAVRKTIDGEHGRQLTLTGKKVGVITYTNAACDEIKQ RLEFDSRVEVMTIHAFSWSLIEGFNADIRQWVAKNLEEEIAELEEQHKKGRPNTKAGVERLRSMESKRRRLARLDSVVKF IYSPTSDNRTRDSLNHSEVIAMTAAFLTSKPGLRRMLVSRCPVLLIDESQDTNKALMDAFLHLEEEFHGRFSLGLFGDLM QRIYSDGKERLDKAIPARWAMPRKRMNHRCPSRVVEVINSIRRDVDGEEQVPRSDAEKGVVRVFIAPQAGADPFAIEAAV RQRMATIAGDPAWQNSDTVKTLALEHLMSARRFGFAEFFEPLWAIDNLRTSLLQGAGAGLGFFIRDVLPLVNALRANDRF AATAIVKASSPLLDRAALQEAGSNQVAQLGKAKAACDGLLALITEQPEINAQAVLEFVAQTGLFSIPDTLAPFVSGDAKA VAAEDNAGQGDQMERTEDGEAEDTSPELSAWSKALEAPLSQIERYDLYARGQSQFATHQGVKGLEFPRVLVVINDDEARG FLFAYDKFFGTKEKSKADLENEAAGRETGSDRTRRLFYVTCSRAEKSLAIVYYSPDPALARSAILQYGWFVQDEVELIN
Sequences:
>Translated_639_residues MTVADDQFDAEADATIIACLDLSKPRSFFLYAGAGSGKTRSLVSAVRKTIDGEHGRQLTLTGKKVGVITYTNAACDEIKQ RLEFDSRVEVMTIHAFSWSLIEGFNADIRQWVAKNLEEEIAELEEQHKKGRPNTKAGVERLRSMESKRRRLARLDSVVKF IYSPTSDNRTRDSLNHSEVIAMTAAFLTSKPGLRRMLVSRCPVLLIDESQDTNKALMDAFLHLEEEFHGRFSLGLFGDLM QRIYSDGKERLDKAIPARWAMPRKRMNHRCPSRVVEVINSIRRDVDGEEQVPRSDAEKGVVRVFIAPQAGADPFAIEAAV RQRMATIAGDPAWQNSDTVKTLALEHLMSARRFGFAEFFEPLWAIDNLRTSLLQGAGAGLGFFIRDVLPLVNALRANDRF AATAIVKASSPLLDRAALQEAGSNQVAQLGKAKAACDGLLALITEQPEINAQAVLEFVAQTGLFSIPDTLAPFVSGDAKA VAAEDNAGQGDQMERTEDGEAEDTSPELSAWSKALEAPLSQIERYDLYARGQSQFATHQGVKGLEFPRVLVVINDDEARG FLFAYDKFFGTKEKSKADLENEAAGRETGSDRTRRLFYVTCSRAEKSLAIVYYSPDPALARSAILQYGWFVQDEVELIN >Mature_638_residues TVADDQFDAEADATIIACLDLSKPRSFFLYAGAGSGKTRSLVSAVRKTIDGEHGRQLTLTGKKVGVITYTNAACDEIKQR LEFDSRVEVMTIHAFSWSLIEGFNADIRQWVAKNLEEEIAELEEQHKKGRPNTKAGVERLRSMESKRRRLARLDSVVKFI YSPTSDNRTRDSLNHSEVIAMTAAFLTSKPGLRRMLVSRCPVLLIDESQDTNKALMDAFLHLEEEFHGRFSLGLFGDLMQ RIYSDGKERLDKAIPARWAMPRKRMNHRCPSRVVEVINSIRRDVDGEEQVPRSDAEKGVVRVFIAPQAGADPFAIEAAVR QRMATIAGDPAWQNSDTVKTLALEHLMSARRFGFAEFFEPLWAIDNLRTSLLQGAGAGLGFFIRDVLPLVNALRANDRFA ATAIVKASSPLLDRAALQEAGSNQVAQLGKAKAACDGLLALITEQPEINAQAVLEFVAQTGLFSIPDTLAPFVSGDAKAV AAEDNAGQGDQMERTEDGEAEDTSPELSAWSKALEAPLSQIERYDLYARGQSQFATHQGVKGLEFPRVLVVINDDEARGF LFAYDKFFGTKEKSKADLENEAAGRETGSDRTRRLFYVTCSRAEKSLAIVYYSPDPALARSAILQYGWFVQDEVELIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70811; Mature: 70680
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVADDQFDAEADATIIACLDLSKPRSFFLYAGAGSGKTRSLVSAVRKTIDGEHGRQLTL CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEE TGKKVGVITYTNAACDEIKQRLEFDSRVEVMTIHAFSWSLIEGFNADIRQWVAKNLEEEI ECCEEEEEEECCHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHH AELEEQHKKGRPNTKAGVERLRSMESKRRRLARLDSVVKFIYSPTSDNRTRDSLNHSEVI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHH AMTAAFLTSKPGLRRMLVSRCPVLLIDESQDTNKALMDAFLHLEEEFHGRFSLGLFGDLM HHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEHHHHHHHH QRIYSDGKERLDKAIPARWAMPRKRMNHRCPSRVVEVINSIRRDVDGEEQVPRSDAEKGV HHHHHHHHHHHHHHCCHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VRVFIAPQAGADPFAIEAAVRQRMATIAGDPAWQNSDTVKTLALEHLMSARRFGFAEFFE EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH PLWAIDNLRTSLLQGAGAGLGFFIRDVLPLVNALRANDRFAATAIVKASSPLLDRAALQE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCHHHHHHHHH AGSNQVAQLGKAKAACDGLLALITEQPEINAQAVLEFVAQTGLFSIPDTLAPFVSGDAKA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCE VAAEDNAGQGDQMERTEDGEAEDTSPELSAWSKALEAPLSQIERYDLYARGQSQFATHQG EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC VKGLEFPRVLVVINDDEARGFLFAYDKFFGTKEKSKADLENEAAGRETGSDRTRRLFYVT CCCCCCCEEEEEEECCCCCCEEEEHHHHHCCCCCHHHCCHHHHCCCCCCCCCCEEEEEEE CSRAEKSLAIVYYSPDPALARSAILQYGWFVQDEVELIN ECCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHCC >Mature Secondary Structure TVADDQFDAEADATIIACLDLSKPRSFFLYAGAGSGKTRSLVSAVRKTIDGEHGRQLTL CCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEE TGKKVGVITYTNAACDEIKQRLEFDSRVEVMTIHAFSWSLIEGFNADIRQWVAKNLEEEI ECCEEEEEEECCHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHH AELEEQHKKGRPNTKAGVERLRSMESKRRRLARLDSVVKFIYSPTSDNRTRDSLNHSEVI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHH AMTAAFLTSKPGLRRMLVSRCPVLLIDESQDTNKALMDAFLHLEEEFHGRFSLGLFGDLM HHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEHHHHHHHH QRIYSDGKERLDKAIPARWAMPRKRMNHRCPSRVVEVINSIRRDVDGEEQVPRSDAEKGV HHHHHHHHHHHHHHCCHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VRVFIAPQAGADPFAIEAAVRQRMATIAGDPAWQNSDTVKTLALEHLMSARRFGFAEFFE EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH PLWAIDNLRTSLLQGAGAGLGFFIRDVLPLVNALRANDRFAATAIVKASSPLLDRAALQE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCHHHHHHHHH AGSNQVAQLGKAKAACDGLLALITEQPEINAQAVLEFVAQTGLFSIPDTLAPFVSGDAKA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCE VAAEDNAGQGDQMERTEDGEAEDTSPELSAWSKALEAPLSQIERYDLYARGQSQFATHQG EEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC VKGLEFPRVLVVINDDEARGFLFAYDKFFGTKEKSKADLENEAAGRETGSDRTRRLFYVT CCCCCCCEEEEEEECCCCCCEEEEHHHHHCCCCCHHHCCHHHHCCCCCCCCCCEEEEEEE CSRAEKSLAIVYYSPDPALARSAILQYGWFVQDEVELIN ECCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA