| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is ssuD [H]
Identifier: 83720974
GI number: 83720974
Start: 2856712
End: 2858142
Strand: Reverse
Name: ssuD [H]
Synonym: BTH_I2501
Alternate gene names: 83720974
Gene position: 2858142-2856712 (Counterclockwise)
Preceding gene: 83718655
Following gene: 83720465
Centisome position: 75.03
GC content: 68.13
Gene sequence:
>1431_bases TTGGAGCAACATTATAGGGGCCCGTGCGCGCATATTTGCCGCGGCGGCACGCTATGCACGAAAGCGGAAAACCTAAGCTC GAAAAAATCGTTCCTATACGAAACCGCGCTCCCTAGACTGATTTCCCGAGAGACGGCCGGGCCGCCCGCCGCGCGACAGC GCGAGCGGATTGCGCGATCCGCCGCGGCGCGTATTTCCACCGCTCATCCGCGAGCGACGCGCGCGCCGCGTCGCCGCCGT TCATTTTTTGCACGAACAGTCAGGCAGGAGCTTCGCATGAATGTGTTCTGGTTCATCCCCACGCACGGCGACAGCCGCTA TCTCGGCACGGCCGAGGGCGCGCGCGCCGCGGATTACGACTACTTCAGGCAGGTCGCGGTGGCGGCCGATACGCTCGGCT ACGACGGCGTGCTGCTGCCGACGGGCCGTTCGTGCGAGGATGCGTGGGTCGTCGCGTCGAGCCTGATTCCGGCGACGAAG CGCCTGAAATTCCTCGTCGCGATCCGGCCCGGCCTGTCGTCGCCGGGGCTGTCCGCGCGGATGGCGTCGACGTTCGATCG GCTCTCCGGCGGGCGTCTGCTGATCAACGTCGTGACGGGCGGCGATTCGGCCGAGCTCGAAGGCGACGGTCTCTTTGCCG ATCACGACACGCGCTACGCGCTCACCGACGACTTCCTGCACATCTGGCGCAAGCTGCTCGCCGAATCGCACGAGAACGGC AGCGTCGATTTCGACGGCGAGCATCTGCGCGCGAAGGGCGGCAAGCTGCTGTATCCGCCCATCCAGCATCCGCATCCGCC GCTGTGGTTCGGCGGCTCGTCGCCCGCCGCGCACGCGATCGCGGCCGATCACATCGAGACTTATCTGACCTGGGGCGAAC CGCCCGCGGCGGTCGCGAAGAAGATCGCCGACATACGCGCGCGCGCGGCCGAGCGCGGCCGCGAGATCAGGTTCGGAATT CGCCTGCACGTGATCGTGCGCGAGACCGAGGAGGAGGCGTGGCGCGACGCGGATCGCCTCATCAGCCGGCTCGACGACGA CACGATCGCGCGCGCGCAGCAGGCGTTTGCGAAGATGGACTCCGAAGGGCAGCGCCGGATGGCCGCGCTGCACGGCGGCA AGCGCGGCTCGCGCCAGGAGCTCGAGATCTATCCGAACCTGTGGGCCGGCGTCGGGCTCGTGCGCGGCGGCGCGGGGACG GCGCTCGTCGGGAATCCCGAGCAAGTCGCCGCGCGCATGCGCGAGTATGCGGCGCTCGGTATCGAGACGTTCATCCTGTC CGGCTATCCGCATCTCGAGGAATCGTACCGCTTCGCCGAGCTCGTGTTTCCGCTCGTCAAGGGCGGCGACGCGCGGCGCG CGGGGCCGCTGTCGGGGCCGTTCGGCGAAGTCGTCGGCAACGGGTATTTGCCGAAGGTGAGCCAGAGCTGA
Upstream 100 bases:
>100_bases GCGGCGAGGAAGCCGGACAGAAACGGCAGGATCACTTTCTGCATCGAGAGCGCCACGTAAAGGCGCGGCGCCACGAGGCG CGCGCGGGGTTGTCAGGGAC
Downstream 100 bases:
>100_bases GCGAGGAGGGCATCGACATGGCAACGACGCATCCAGGCGCGCGCCGCGCCGGCCCGGCCGCGCGCGCGGTCGCGCCGTGG CTCGTGCCGCTTGCGCTCGC
Product: alkanesulfonate monooxygenase
Products: NA
Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MEQHYRGPCAHICRGGTLCTKAENLSSKKSFLYETALPRLISRETAGPPAARQRERIARSAAARISTAHPRATRAPRRRR SFFARTVRQELRMNVFWFIPTHGDSRYLGTAEGARAADYDYFRQVAVAADTLGYDGVLLPTGRSCEDAWVVASSLIPATK RLKFLVAIRPGLSSPGLSARMASTFDRLSGGRLLINVVTGGDSAELEGDGLFADHDTRYALTDDFLHIWRKLLAESHENG SVDFDGEHLRAKGGKLLYPPIQHPHPPLWFGGSSPAAHAIAADHIETYLTWGEPPAAVAKKIADIRARAAERGREIRFGI RLHVIVRETEEEAWRDADRLISRLDDDTIARAQQAFAKMDSEGQRRMAALHGGKRGSRQELEIYPNLWAGVGLVRGGAGT ALVGNPEQVAARMREYAALGIETFILSGYPHLEESYRFAELVFPLVKGGDARRAGPLSGPFGEVVGNGYLPKVSQS
Sequences:
>Translated_476_residues MEQHYRGPCAHICRGGTLCTKAENLSSKKSFLYETALPRLISRETAGPPAARQRERIARSAAARISTAHPRATRAPRRRR SFFARTVRQELRMNVFWFIPTHGDSRYLGTAEGARAADYDYFRQVAVAADTLGYDGVLLPTGRSCEDAWVVASSLIPATK RLKFLVAIRPGLSSPGLSARMASTFDRLSGGRLLINVVTGGDSAELEGDGLFADHDTRYALTDDFLHIWRKLLAESHENG SVDFDGEHLRAKGGKLLYPPIQHPHPPLWFGGSSPAAHAIAADHIETYLTWGEPPAAVAKKIADIRARAAERGREIRFGI RLHVIVRETEEEAWRDADRLISRLDDDTIARAQQAFAKMDSEGQRRMAALHGGKRGSRQELEIYPNLWAGVGLVRGGAGT ALVGNPEQVAARMREYAALGIETFILSGYPHLEESYRFAELVFPLVKGGDARRAGPLSGPFGEVVGNGYLPKVSQS >Mature_476_residues MEQHYRGPCAHICRGGTLCTKAENLSSKKSFLYETALPRLISRETAGPPAARQRERIARSAAARISTAHPRATRAPRRRR SFFARTVRQELRMNVFWFIPTHGDSRYLGTAEGARAADYDYFRQVAVAADTLGYDGVLLPTGRSCEDAWVVASSLIPATK RLKFLVAIRPGLSSPGLSARMASTFDRLSGGRLLINVVTGGDSAELEGDGLFADHDTRYALTDDFLHIWRKLLAESHENG SVDFDGEHLRAKGGKLLYPPIQHPHPPLWFGGSSPAAHAIAADHIETYLTWGEPPAAVAKKIADIRARAAERGREIRFGI RLHVIVRETEEEAWRDADRLISRLDDDTIARAQQAFAKMDSEGQRRMAALHGGKRGSRQELEIYPNLWAGVGLVRGGAGT ALVGNPEQVAARMREYAALGIETFILSGYPHLEESYRFAELVFPLVKGGDARRAGPLSGPFGEVVGNGYLPKVSQS
Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family [H]
Homologues:
Organism=Escherichia coli, GI1787166, Length=389, Percent_Identity=60.9254498714653, Blast_Score=485, Evalue=1e-138, Organism=Escherichia coli, GI1787247, Length=382, Percent_Identity=22.7748691099476, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.5 [H]
Molecular weight: Translated: 52300; Mature: 52300
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQHYRGPCAHICRGGTLCTKAENLSSKKSFLYETALPRLISRETAGPPAARQRERIARS CCCCCCCCHHHHHCCCCEEECHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AAARISTAHPRATRAPRRRRSFFARTVRQELRMNVFWFIPTHGDSRYLGTAEGARAADYD HHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEECCCCCCCCCCHH YFRQVAVAADTLGYDGVLLPTGRSCEDAWVVASSLIPATKRLKFLVAIRPGLSSPGLSAR HHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCHHHHEEEEEEECCCCCCCCCHHH MASTFDRLSGGRLLINVVTGGDSAELEGDGLFADHDTRYALTDDFLHIWRKLLAESHENG HHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEECCCCCEEHHHHHHHHHHHHHHCCCCCC SVDFDGEHLRAKGGKLLYPPIQHPHPPLWFGGSSPAAHAIAADHIETYLTWGEPPAAVAK CCCCCCHHHHCCCCEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHEECCCCHHHHHH KIADIRARAAERGREIRFGIRLHVIVRETEEEAWRDADRLISRLDDDTIARAQQAFAKMD HHHHHHHHHHHCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC SEGQRRMAALHGGKRGSRQELEIYPNLWAGVGLVRGGAGTALVGNPEQVAARMREYAALG CHHHHHHHHHHCCCCCCCCCEEECCCHHHCCCEEECCCCCEEECCHHHHHHHHHHHHHHH IETFILSGYPHLEESYRFAELVFPLVKGGDARRAGPLSGPFGEVVGNGYLPKVSQS HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC >Mature Secondary Structure MEQHYRGPCAHICRGGTLCTKAENLSSKKSFLYETALPRLISRETAGPPAARQRERIARS CCCCCCCCHHHHHCCCCEEECHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AAARISTAHPRATRAPRRRRSFFARTVRQELRMNVFWFIPTHGDSRYLGTAEGARAADYD HHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEECCCCCCCCCCHH YFRQVAVAADTLGYDGVLLPTGRSCEDAWVVASSLIPATKRLKFLVAIRPGLSSPGLSAR HHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCHHHHEEEEEEECCCCCCCCCHHH MASTFDRLSGGRLLINVVTGGDSAELEGDGLFADHDTRYALTDDFLHIWRKLLAESHENG HHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEECCCCCEEHHHHHHHHHHHHHHCCCCCC SVDFDGEHLRAKGGKLLYPPIQHPHPPLWFGGSSPAAHAIAADHIETYLTWGEPPAAVAK CCCCCCHHHHCCCCEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHEECCCCHHHHHH KIADIRARAAERGREIRFGIRLHVIVRETEEEAWRDADRLISRLDDDTIARAQQAFAKMD HHHHHHHHHHHCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC SEGQRRMAALHGGKRGSRQELEIYPNLWAGVGLVRGGAGTALVGNPEQVAARMREYAALG CHHHHHHHHHHCCCCCCCCCEEECCCHHHCCCEEECCCCCEEECCHHHHHHHHHHHHHHH IETFILSGYPHLEESYRFAELVFPLVKGGDARRAGPLSGPFGEVVGNGYLPKVSQS HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA