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The map label for this gene is intZ [H]

Identifier: 83720961

GI number: 83720961

Start: 3683477

End: 3684706

Strand: Reverse

Name: intZ [H]

Synonym: BTH_I3232

Alternate gene names: 83720961

Gene position: 3684706-3683477 (Counterclockwise)

Preceding gene: 161723129

Following gene: 83719770

Centisome position: 96.73

GC content: 60.65

Gene sequence:

>1230_bases
ATGCCGAAAGTCGTTCAACCGCTGACCGATACCCGCGTCAAGGCATTGCAACCGAAAGCGGCCCGCTATCCTGTCTCTGA
CGGGGGTGGTCTGATTTTGGAGGTAATGCCGTCAGGCTCGAAATTCTGGCGCTACCGCTACTCGCTGCATGGCAAGCGCC
AGCCGCCCGTGACGATTGGCGAATATCCGGCCGTCAGCTTGGCAGCTGCTCGTGAGCGCGCCCGTCGATATGCGGAGATC
GTGGCTGGTGGCGTTTCCCCGGTAGCGGATGCTCGGAAAGATCGGGGCACAACCAAGGCGCTCAATACCGTGCGTGAGTT
CGCTGCGTACTGGCTCGAACAACAGATGGCGGACAAGTCGGCCGAGTATCAGCGGACGACGAAACGCGCACTCGAAAAGG
ACGTGTTTCCGGCGCTCGGCAGCAAGCCGGTATCCGAAGTGACCCCCGGCGATGTGCTGGCGATCTGCGACCGGATCAAG
AAGCGCGGAGCGCCGAAGATGGCCTTGCACACCCGCAATGTCATCAAGCGAATGTACGAATATGCGATTGCGCGCCAGCT
CGTGACGATCAATCCGGCGCAGGCGGTAGTTGCCCGTTTTATCGCCACGCAGGAGAGCCGCGACCGCGTGCTATCTCCCG
ACGAGCTCGGGCACGTGCTGCGCGTCGTCTATGCATCGAGTATCCGCCGACCGTTGAAGCTGGCGATTCATCTGCTGGTG
CTGACAATGGTCCGCAAGTCCGAATTGATCGAGGCTAGATGGTCCGAATTCGACCTGGATGCCGCCGTCTGGCGTATCCC
GTCTGATCGGATGAAGAAACCCCGCGAGCATTGGGTCTACCTTGCTCCGCAGGCCGTGCTGATGCTGCGCGAGTTGTATG
AAACTCGCACGAGCCAGCAATACGTGTTTCCTTCATCTCGCGGTGCGGACCGGCCAATCGCCAAGAGCACGTTAAACCAA
GCCGTACGGGCGCTCGATATGGAGGTTCAGCACTTTGTGCTGCACGACTTCCGGCGCACCGCCAGCACGCACCTTCACGA
GATGGGGCAACCGTCAGACGCAATCGAGAAGGCGCTTTCGCACACCATCACGGGAATCAAGGGCGTCTACAACCGTGCGG
AGTACGCCGAACAGCGCCGCCACATCCTCGCCCTGTGGGCCGCTTTCGTTGAGGCTCAGATAGACGAGGGGCGCAAGGTG
ATCCTCGGCAAATTCGCAGCGAATGGGTAG

Upstream 100 bases:

>100_bases
ACGCGAAATCATGTATGCCAAAAACACCTCATGGCCTTATCTGGCAAGCGTTTCCGGCCGAGGTAAACATCAAGAATCTG
TATGCCAAAAGGGGAAGACC

Downstream 100 bases:

>100_bases
TTGAGGCGCGTCGCCGGAATGAAATGTCTTGGGAACAGCGGGAACATTGGGAACAGATGGCGTAGAGGATTGATTTGTCT
GGATTATTTTGTTCCCAAGT

Product: phage integrase family site specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MPKVVQPLTDTRVKALQPKAARYPVSDGGGLILEVMPSGSKFWRYRYSLHGKRQPPVTIGEYPAVSLAAARERARRYAEI
VAGGVSPVADARKDRGTTKALNTVREFAAYWLEQQMADKSAEYQRTTKRALEKDVFPALGSKPVSEVTPGDVLAICDRIK
KRGAPKMALHTRNVIKRMYEYAIARQLVTINPAQAVVARFIATQESRDRVLSPDELGHVLRVVYASSIRRPLKLAIHLLV
LTMVRKSELIEARWSEFDLDAAVWRIPSDRMKKPREHWVYLAPQAVLMLRELYETRTSQQYVFPSSRGADRPIAKSTLNQ
AVRALDMEVQHFVLHDFRRTASTHLHEMGQPSDAIEKALSHTITGIKGVYNRAEYAEQRRHILALWAAFVEAQIDEGRKV
ILGKFAANG

Sequences:

>Translated_409_residues
MPKVVQPLTDTRVKALQPKAARYPVSDGGGLILEVMPSGSKFWRYRYSLHGKRQPPVTIGEYPAVSLAAARERARRYAEI
VAGGVSPVADARKDRGTTKALNTVREFAAYWLEQQMADKSAEYQRTTKRALEKDVFPALGSKPVSEVTPGDVLAICDRIK
KRGAPKMALHTRNVIKRMYEYAIARQLVTINPAQAVVARFIATQESRDRVLSPDELGHVLRVVYASSIRRPLKLAIHLLV
LTMVRKSELIEARWSEFDLDAAVWRIPSDRMKKPREHWVYLAPQAVLMLRELYETRTSQQYVFPSSRGADRPIAKSTLNQ
AVRALDMEVQHFVLHDFRRTASTHLHEMGQPSDAIEKALSHTITGIKGVYNRAEYAEQRRHILALWAAFVEAQIDEGRKV
ILGKFAANG
>Mature_408_residues
PKVVQPLTDTRVKALQPKAARYPVSDGGGLILEVMPSGSKFWRYRYSLHGKRQPPVTIGEYPAVSLAAARERARRYAEIV
AGGVSPVADARKDRGTTKALNTVREFAAYWLEQQMADKSAEYQRTTKRALEKDVFPALGSKPVSEVTPGDVLAICDRIKK
RGAPKMALHTRNVIKRMYEYAIARQLVTINPAQAVVARFIATQESRDRVLSPDELGHVLRVVYASSIRRPLKLAIHLLVL
TMVRKSELIEARWSEFDLDAAVWRIPSDRMKKPREHWVYLAPQAVLMLRELYETRTSQQYVFPSSRGADRPIAKSTLNQA
VRALDMEVQHFVLHDFRRTASTHLHEMGQPSDAIEKALSHTITGIKGVYNRAEYAEQRRHILALWAAFVEAQIDEGRKVI
LGKFAANG

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=393, Percent_Identity=34.6055979643766, Blast_Score=197, Evalue=7e-52,
Organism=Escherichia coli, GI1788974, Length=405, Percent_Identity=31.6049382716049, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1788690, Length=390, Percent_Identity=26.4102564102564, Blast_Score=148, Evalue=8e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 46171; Mature: 46040

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVVQPLTDTRVKALQPKAARYPVSDGGGLILEVMPSGSKFWRYRYSLHGKRQPPVTIG
CCCCCCCHHHHHHHHCCCCHHCCCCCCCCCEEEEEECCCCHHEEEEEEECCCCCCCCEEC
EYPAVSLAAARERARRYAEIVAGGVSPVADARKDRGTTKALNTVREFAAYWLEQQMADKS
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AEYQRTTKRALEKDVFPALGSKPVSEVTPGDVLAICDRIKKRGAPKMALHTRNVIKRMYE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
YAIARQLVTINPAQAVVARFIATQESRDRVLSPDELGHVLRVVYASSIRRPLKLAIHLLV
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTMVRKSELIEARWSEFDLDAAVWRIPSDRMKKPREHWVYLAPQAVLMLRELYETRTSQQ
HHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCCHHHEEEECHHHHHHHHHHHHHCCCCE
YVFPSSRGADRPIAKSTLNQAVRALDMEVQHFVLHDFRRTASTHLHEMGQPSDAIEKALS
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
HTITGIKGVYNRAEYAEQRRHILALWAAFVEAQIDEGRKVILGKFAANG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure 
PKVVQPLTDTRVKALQPKAARYPVSDGGGLILEVMPSGSKFWRYRYSLHGKRQPPVTIG
CCCCCCHHHHHHHHCCCCHHCCCCCCCCCEEEEEECCCCHHEEEEEEECCCCCCCCEEC
EYPAVSLAAARERARRYAEIVAGGVSPVADARKDRGTTKALNTVREFAAYWLEQQMADKS
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AEYQRTTKRALEKDVFPALGSKPVSEVTPGDVLAICDRIKKRGAPKMALHTRNVIKRMYE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
YAIARQLVTINPAQAVVARFIATQESRDRVLSPDELGHVLRVVYASSIRRPLKLAIHLLV
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTMVRKSELIEARWSEFDLDAAVWRIPSDRMKKPREHWVYLAPQAVLMLRELYETRTSQQ
HHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCCHHHEEEECHHHHHHHHHHHHHCCCCE
YVFPSSRGADRPIAKSTLNQAVRALDMEVQHFVLHDFRRTASTHLHEMGQPSDAIEKALS
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
HTITGIKGVYNRAEYAEQRRHILALWAAFVEAQIDEGRKVILGKFAANG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]