| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720948
Identifier: 83720948
GI number: 83720948
Start: 3003560
End: 3004165
Strand: Reverse
Name: 83720948
Synonym: BTH_I2635
Alternate gene names: NA
Gene position: 3004165-3003560 (Counterclockwise)
Preceding gene: 83718708
Following gene: 83720350
Centisome position: 78.87
GC content: 72.11
Gene sequence:
>606_bases ATGAAAGTCTTGTGGACGGGGGCGGCGCTGGCGGCCGCACTGTTGTCCGGATGCGCGTCGGTGACGACGGGCGTCAGCGC ATCGGGGGCGCTGGCGGGCGCGCGAACCTACGATTTCGCGCGGACGGCCGCGCAATCCGACAACGCGGATTATCGGCAAG TGGAGACGCTCGTGCGCCGCGAGCTCGCGCAGCGCGGCTTCGACGAAGCGTCCGGCGTGCAGGCACGCTACCGGGTAACG ATCGCCTATGCGACGCAGCCGGCGTCCGTCGCGCTGACGATGCCGGGCTGCGGCGGCGCGCAGCAGCCGGCATGCGTCGC GGTCGACGGGCCCGCGCCGTTCGGGCTGCCGTTCGCGGGCACGGTCTACCGGCACGTGCTGACGCTGCGCTTCGTCGAGC GCAGCAGCGGCAGCGACGCGTATCGCGTGTCGGCGGCCGTGCAGGACCGCCATCCCGATGCGTTGCTCGCGGCGCCCGCG CTCGTGCGCAGCGCGCTTGCGCGCGTGCCGTTTGCGGACGGAAAGGGCTGGCTGGTGGAAACGAAGAAGCGCGACGCCGA CGCGATACCCGGCGTCGTGTCGGTGAAGCCCGTTCGCGCGAACTGA
Upstream 100 bases:
>100_bases CGTTGGCGTGACGACGCAAGTATTCGACCGCCCGGCGCGAGTGGGGCTTGTGCACGGGCGGATGGCTAGGACGGGGGCGA ACAGCGATATGGGAGAAGCT
Downstream 100 bases:
>100_bases GCGGGGGGGCGGTGACAGGTGCGTGCCGCGCGGCGGCGGCGCATGATGCGCACCGCCCGCCGCGCGGCGCGGGAGTTCAT GCGTCGTGCCGCGTTTCGCT
Product: lipoprotein
Products: NA
Alternate protein names: Transmembrane Lipoprotein
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKVLWTGAALAAALLSGCASVTTGVSASGALAGARTYDFARTAAQSDNADYRQVETLVRRELAQRGFDEASGVQARYRVT IAYATQPASVALTMPGCGGAQQPACVAVDGPAPFGLPFAGTVYRHVLTLRFVERSSGSDAYRVSAAVQDRHPDALLAAPA LVRSALARVPFADGKGWLVETKKRDADAIPGVVSVKPVRAN
Sequences:
>Translated_201_residues MKVLWTGAALAAALLSGCASVTTGVSASGALAGARTYDFARTAAQSDNADYRQVETLVRRELAQRGFDEASGVQARYRVT IAYATQPASVALTMPGCGGAQQPACVAVDGPAPFGLPFAGTVYRHVLTLRFVERSSGSDAYRVSAAVQDRHPDALLAAPA LVRSALARVPFADGKGWLVETKKRDADAIPGVVSVKPVRAN >Mature_201_residues MKVLWTGAALAAALLSGCASVTTGVSASGALAGARTYDFARTAAQSDNADYRQVETLVRRELAQRGFDEASGVQARYRVT IAYATQPASVALTMPGCGGAQQPACVAVDGPAPFGLPFAGTVYRHVLTLRFVERSSGSDAYRVSAAVQDRHPDALLAAPA LVRSALARVPFADGKGWLVETKKRDADAIPGVVSVKPVRAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20933; Mature: 20933
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLWTGAALAAALLSGCASVTTGVSASGALAGARTYDFARTAAQSDNADYRQVETLVRR CEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH ELAQRGFDEASGVQARYRVTIAYATQPASVALTMPGCGGAQQPACVAVDGPAPFGLPFAG HHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHH TVYRHVLTLRFVERSSGSDAYRVSAAVQDRHPDALLAAPALVRSALARVPFADGKGWLVE HHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE TKKRDADAIPGVVSVKPVRAN CCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MKVLWTGAALAAALLSGCASVTTGVSASGALAGARTYDFARTAAQSDNADYRQVETLVRR CEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH ELAQRGFDEASGVQARYRVTIAYATQPASVALTMPGCGGAQQPACVAVDGPAPFGLPFAG HHHHCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHH TVYRHVLTLRFVERSSGSDAYRVSAAVQDRHPDALLAAPALVRSALARVPFADGKGWLVE HHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE TKKRDADAIPGVVSVKPVRAN CCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA