| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720927
Identifier: 83720927
GI number: 83720927
Start: 3095322
End: 3095921
Strand: Reverse
Name: 83720927
Synonym: BTH_I2702
Alternate gene names: NA
Gene position: 3095921-3095322 (Counterclockwise)
Preceding gene: 83720303
Following gene: 83719397
Centisome position: 81.27
GC content: 49.67
Gene sequence:
>600_bases ATGAATTTGCGCGTTGGCCCGATGAAGACCTTTATTAGATTGACCATATTTCTGATTGTATTTCTGGCTGGTGCCGGTTG CTCGCGCGCAATAGATCGGGCGCCCGCTCCTCTCGCCACGGAAGGCGAAGAGGTCGCACAGTCGGAAGGCGACACGATGA GTCTGAACTTGAATGCGCTTAACTATACGGAGATTCCAATAGGGAAATTCTATGTCAATGGCACTTGGGGGGGGAATGTC AGATCCCGCATAGGAAGCGGTGGGATTGGCATCCTTTGTTGCGTTTCGCTGCCCAAAAAATGGCACCCCGGATTGAATAT AACAGTCGAGTGGCGAGACGATGAGATGTATAAAAATGATCCAAATTCATTGGCAAGTCGAGCGGTTCCTGTCGAAAAAT ATGAATACTTCTCGGATGGATTCCTCTGGGTATTATTTTTCCCAGGCGGGAAAATTAAGGCCTATGCATCGAAATGGATG CCGGGATTTCCAGGGTTTCCAGAAGGACTGCAAGCGCCAAATGTGGCCTGCCCGGGACATTTCACCTTATTAAACAGTGA TCCGCGATGCCCCGCGCCCGATAAAAGGATCAAACCATGA
Upstream 100 bases:
>100_bases TCCCGGAAGGGCTGCAGGCGCCGGATAGCGCGTGTCCGGATCACTTCACGTTGCTGAGCGACGATCCGCGCTGTCCCCAT CCCGATAAGAGAATCAAGTC
Downstream 100 bases:
>100_bases GCTACCGTTTCGCATCCGCTGACCGATTCGATGCTAATTTCGTTACGAAAGACGAGCAGGACGCGATTTTGCGGAGGTTG CGTGAAGATGATGCTATGAC
Product: lipoprotein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MNLRVGPMKTFIRLTIFLIVFLAGAGCSRAIDRAPAPLATEGEEVAQSEGDTMSLNLNALNYTEIPIGKFYVNGTWGGNV RSRIGSGGIGILCCVSLPKKWHPGLNITVEWRDDEMYKNDPNSLASRAVPVEKYEYFSDGFLWVLFFPGGKIKAYASKWM PGFPGFPEGLQAPNVACPGHFTLLNSDPRCPAPDKRIKP
Sequences:
>Translated_199_residues MNLRVGPMKTFIRLTIFLIVFLAGAGCSRAIDRAPAPLATEGEEVAQSEGDTMSLNLNALNYTEIPIGKFYVNGTWGGNV RSRIGSGGIGILCCVSLPKKWHPGLNITVEWRDDEMYKNDPNSLASRAVPVEKYEYFSDGFLWVLFFPGGKIKAYASKWM PGFPGFPEGLQAPNVACPGHFTLLNSDPRCPAPDKRIKP >Mature_199_residues MNLRVGPMKTFIRLTIFLIVFLAGAGCSRAIDRAPAPLATEGEEVAQSEGDTMSLNLNALNYTEIPIGKFYVNGTWGGNV RSRIGSGGIGILCCVSLPKKWHPGLNITVEWRDDEMYKNDPNSLASRAVPVEKYEYFSDGFLWVLFFPGGKIKAYASKWM PGFPGFPEGLQAPNVACPGHFTLLNSDPRCPAPDKRIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21839; Mature: 21839
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRVGPMKTFIRLTIFLIVFLAGAGCSRAIDRAPAPLATEGEEVAQSEGDTMSLNLNAL CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEECEE NYTEIPIGKFYVNGTWGGNVRSRIGSGGIGILCCVSLPKKWHPGLNITVEWRDDEMYKND EEEECCCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCHHCCCCCEEEEEECCCCCCCCC PNSLASRAVPVEKYEYFSDGFLWVLFFPGGKIKAYASKWMPGFPGFPEGLQAPNVACPGH CHHHHHHCCCHHHHHCCCCCEEEEEEECCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCE FTLLNSDPRCPAPDKRIKP EEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNLRVGPMKTFIRLTIFLIVFLAGAGCSRAIDRAPAPLATEGEEVAQSEGDTMSLNLNAL CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEECEE NYTEIPIGKFYVNGTWGGNVRSRIGSGGIGILCCVSLPKKWHPGLNITVEWRDDEMYKND EEEECCCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCHHCCCCCEEEEEECCCCCCCCC PNSLASRAVPVEKYEYFSDGFLWVLFFPGGKIKAYASKWMPGFPGFPEGLQAPNVACPGH CHHHHHHCCCHHHHHCCCCCEEEEEEECCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCE FTLLNSDPRCPAPDKRIKP EEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA