| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720877
Identifier: 83720877
GI number: 83720877
Start: 1025109
End: 1025615
Strand: Reverse
Name: 83720877
Synonym: BTH_I0898
Alternate gene names: NA
Gene position: 1025615-1025109 (Counterclockwise)
Preceding gene: 83718604
Following gene: 83719774
Centisome position: 26.92
GC content: 72.58
Gene sequence:
>507_bases ATGAGCGTGAACACGCGCGCGGCGCTGCCGCTCGCGACGGCGCTCGCGCTCGCCGCGGCGGCGCTCGGCCTGTCCGGCTG CGGCTCGGTCGGCGCGGCGAGCGGCGCGCTTGCGGGCGCGGCGACGGGTCTCGTCACCGCGAATCCGGCCATCGGCGTCG GTGTCGGCATTGCGGTGCAGGCAGCGACCGACGAAGCCGTCAACCGGACGATGAAGCAGCTCCACAAGAATCAACAGGAC GCGATCGCGCAGGCGGCGGGCGGCCTCGCCGTCGGCGAGGCGCGCGCGTGGCAGGTGAAGAACCGGGTGCCGCTCGAAAA CGGCGAAGGCGAGGTGCGCGTGACGCGCGCGTTCCAGACGCCGCTCGCGCTTTGCAAGGAATTCGCGTTTTCGGTGAAGG ATGGCGCCCGCGCCGACTGGTATCTCGCGAGCGCGTGCCAGGATGCGCAGGGCTGGCAATGGGCGTCGGCGGAGCCGGCC GTCGAACGCTGGGGCACCCTGCAGTGA
Upstream 100 bases:
>100_bases CCGCGCAATCGGGCTTCTACGTCGCGACGATCTGCCGGGACGGCCCCGCATGGAAGTGGGCGTCGGCGGAACCCGCGACC GGCCGCTGGGGAGCGCTGCA
Downstream 100 bases:
>100_bases CGCGGGCCAGGCGGCCAAGCGATCGCGGCCGCTCGAAAAACGCCTCTCACGGACAACGAATCGTACACTGAAGCAACAAA GGCCCGCGCGGCGAACACGG
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSVNTRAALPLATALALAAAALGLSGCGSVGAASGALAGAATGLVTANPAIGVGVGIAVQAATDEAVNRTMKQLHKNQQD AIAQAAGGLAVGEARAWQVKNRVPLENGEGEVRVTRAFQTPLALCKEFAFSVKDGARADWYLASACQDAQGWQWASAEPA VERWGTLQ
Sequences:
>Translated_168_residues MSVNTRAALPLATALALAAAALGLSGCGSVGAASGALAGAATGLVTANPAIGVGVGIAVQAATDEAVNRTMKQLHKNQQD AIAQAAGGLAVGEARAWQVKNRVPLENGEGEVRVTRAFQTPLALCKEFAFSVKDGARADWYLASACQDAQGWQWASAEPA VERWGTLQ >Mature_167_residues SVNTRAALPLATALALAAAALGLSGCGSVGAASGALAGAATGLVTANPAIGVGVGIAVQAATDEAVNRTMKQLHKNQQDA IAQAAGGLAVGEARAWQVKNRVPLENGEGEVRVTRAFQTPLALCKEFAFSVKDGARADWYLASACQDAQGWQWASAEPAV ERWGTLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17084; Mature: 16953
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNTRAALPLATALALAAAALGLSGCGSVGAASGALAGAATGLVTANPAIGVGVGIAVQ CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCEEECCCCCCCCCCEEEE AATDEAVNRTMKQLHKNQQDAIAQAAGGLAVGEARAWQVKNRVPLENGEGEVRVTRAFQT CCCHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCHHEECCCCCCCCCCCCCEEEEEHHHH PLALCKEFAFSVKDGARADWYLASACQDAQGWQWASAEPAVERWGTLQ HHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure SVNTRAALPLATALALAAAALGLSGCGSVGAASGALAGAATGLVTANPAIGVGVGIAVQ CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCEEECCCCCCCCCCEEEE AATDEAVNRTMKQLHKNQQDAIAQAAGGLAVGEARAWQVKNRVPLENGEGEVRVTRAFQT CCCHHHHHHHHHHHHCCHHHHHHHHHCCCEECCCHHEECCCCCCCCCCCCCEEEEEHHHH PLALCKEFAFSVKDGARADWYLASACQDAQGWQWASAEPAVERWGTLQ HHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA