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The map label for this gene is flhF [H]

Identifier: 83720875

GI number: 83720875

Start: 3612157

End: 3613890

Strand: Reverse

Name: flhF [H]

Synonym: BTH_I3168

Alternate gene names: 83720875

Gene position: 3613890-3612157 (Counterclockwise)

Preceding gene: 83719420

Following gene: 83720427

Centisome position: 94.87

GC content: 71.16

Gene sequence:

>1734_bases
TTGAACATTCGCAAATTCATTGGTCCGACGAGCCGCGACGCGCTGCGCCTCGTGCGCGAAGCGATGGGCGCCGACGCGGC
GGTACTGTCGAACCGGACGCTCGAAGACGGACGCGTCGAGATCGTCGCGCTGCCCGCCGCCGAACTCGCCGAAATCTCGA
CACGCCGCGCAGGCGACGCCGCCGCGCACGGCGTGGCCCAGCCGCACGCGCCGCGACCGGGCGCGCAGCATGCGCCTGCG
GGGCCGTCGTTCGCGTCGCCCGCCGCATCGGTTGTCGTGCCGAGCGCTGCCGCGTCGGCGTCGGCGTCGCGCGCGGCCGC
GAATCCGTACGCGGCGGGCGGCATGCCCGACGTGTTCTCGTCGGTGTTCGGCGCGAGCGTCGAGACTTCGGCCGATGACG
ATACGCCGCCCGCCGTCTCCATGCCGGCGCCGCCCGCGCAGCCGGCCGCCGCGCCGTCCGAGCCCGCGCCGTGGCTCGTC
GAGCACGCGAAGCGGTTGACGAAGCAGCACGAAGAGCTCGTCGCGCGTCCGCGCGCCGCGCCCACCGTGCCGCATGCGCC
GCGCGAGCGCGCGGCAGCCGACGAAGCGCCCGAATGGGCGCGCGACATCGTGCGCAACGCCGCACGCCGGCTGCCGGCCG
ACGAGCCTTCGGCGGCCAAGCCGGCGCTGCGCCTGCCCGAGGATACGGCGGCCGTCGTCGCGGACGCGGTGAAGGCGCGC
ATCGAGCGCATCGTCAACGACACGGTGATGCAGGAGCTCGGCTCGCTGCGCGAGCTGATGGAAGAACAGTTCGCGGGCCT
GATGTGGAACGAGCGCCAGCGCCGCAACCCGGTGCACGGCGCACTGACGAAATACCTGTTCGCGGCGGGCTTCTCCGCGC
AGCTCGTGCGGATGATCGTCGACAACCTGCCGGAAGGCGAAGGCTACGACACGCTCGACGCGGCGGCCGACTGGGCGCAG
TCGGTGCTCGCGGCGAACCTGCCCGTGCTCGACAGCGAGGACGCGCTGATGGAGCGCGGCGGCGTGTTCGCGCTGATGGG
GCCGACGGGCGTCGGCAAGACGACGACGACCGCGAAGCTCGCCGCCCGCTGCGTGATGCGCTTCGGCGCGAGCAAGGTCG
CGCTGCTCACGACGGACAGCTACCGGATCGGCGGCCACGAGCAGTTGCGCATCTTCGGCAAGATCCTCGGCGTGCCGGTG
CACGCGGTGAAGGACGGCGGCGATCTGCAGCTCGCGCTCGCCGAGCTGCGCAACAAGCACATGGTGCTGATCGACACGAT
CGGCATGAGCCAGCGCGACCGCACGGTGTCCGACCAGATCGCGATGCTGCACGGCGCGGACACGCCGGTGCAGCGCCTGC
TGCTGCTGAACGCGACGAGCCACGGCGACACGCTCAACGAAGTCGTGCAGGCATACCGCAGCGCGGCCGGGCAGCCTAGA
TCGGCCCTGCCGGATCTCGCGGGCTGCATCCTGACGAAGCTCGACGAAGCGAGCAACCTGGGCGGCGTGCTCGACACGGT
GATCCGCTACAAGCTGCCGGTCCACTACGTGTCGACCGGCCAGAAGGTGCCCGAGAACCTGTACGTCGCGACGAAGAAAT
TCCTGCTGAAGAGCGCGTTCTGCGCGCCGCGCGAGGATTCGCCGTTCGTGCCGCACGACGACGATCTGCCGGCGATGCTG
TCCGCGCTGAGCGCACGCACCGGCAACGAACTGCACGAGGTCCGCTTTGGATAA

Upstream 100 bases:

>100_bases
GCTTCCTGCGCCGCAGCCTGCCGCAATTGAAAGTGCTGTCCTACGCCGAAGTGCCGGACACGCGCACGATCAAGGTCGTT
AACGTCATCGGGGGTACCGC

Downstream 100 bases:

>100_bases
GCGCATCACCGACCAGGCAGAAGGATTGCGGCGCCTGCTCGCCGGACGCGCGTCGCGCGTCGTCGCGGTGACGGGCGGAC
CGTCGGGCGTCGGCTGCACG

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MNIRKFIGPTSRDALRLVREAMGADAAVLSNRTLEDGRVEIVALPAAELAEISTRRAGDAAAHGVAQPHAPRPGAQHAPA
GPSFASPAASVVVPSAAASASASRAAANPYAAGGMPDVFSSVFGASVETSADDDTPPAVSMPAPPAQPAAAPSEPAPWLV
EHAKRLTKQHEELVARPRAAPTVPHAPRERAAADEAPEWARDIVRNAARRLPADEPSAAKPALRLPEDTAAVVADAVKAR
IERIVNDTVMQELGSLRELMEEQFAGLMWNERQRRNPVHGALTKYLFAAGFSAQLVRMIVDNLPEGEGYDTLDAAADWAQ
SVLAANLPVLDSEDALMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVPV
HAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAMLHGADTPVQRLLLLNATSHGDTLNEVVQAYRSAAGQPR
SALPDLAGCILTKLDEASNLGGVLDTVIRYKLPVHYVSTGQKVPENLYVATKKFLLKSAFCAPREDSPFVPHDDDLPAML
SALSARTGNELHEVRFG

Sequences:

>Translated_577_residues
MNIRKFIGPTSRDALRLVREAMGADAAVLSNRTLEDGRVEIVALPAAELAEISTRRAGDAAAHGVAQPHAPRPGAQHAPA
GPSFASPAASVVVPSAAASASASRAAANPYAAGGMPDVFSSVFGASVETSADDDTPPAVSMPAPPAQPAAAPSEPAPWLV
EHAKRLTKQHEELVARPRAAPTVPHAPRERAAADEAPEWARDIVRNAARRLPADEPSAAKPALRLPEDTAAVVADAVKAR
IERIVNDTVMQELGSLRELMEEQFAGLMWNERQRRNPVHGALTKYLFAAGFSAQLVRMIVDNLPEGEGYDTLDAAADWAQ
SVLAANLPVLDSEDALMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVPV
HAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAMLHGADTPVQRLLLLNATSHGDTLNEVVQAYRSAAGQPR
SALPDLAGCILTKLDEASNLGGVLDTVIRYKLPVHYVSTGQKVPENLYVATKKFLLKSAFCAPREDSPFVPHDDDLPAML
SALSARTGNELHEVRFG
>Mature_577_residues
MNIRKFIGPTSRDALRLVREAMGADAAVLSNRTLEDGRVEIVALPAAELAEISTRRAGDAAAHGVAQPHAPRPGAQHAPA
GPSFASPAASVVVPSAAASASASRAAANPYAAGGMPDVFSSVFGASVETSADDDTPPAVSMPAPPAQPAAAPSEPAPWLV
EHAKRLTKQHEELVARPRAAPTVPHAPRERAAADEAPEWARDIVRNAARRLPADEPSAAKPALRLPEDTAAVVADAVKAR
IERIVNDTVMQELGSLRELMEEQFAGLMWNERQRRNPVHGALTKYLFAAGFSAQLVRMIVDNLPEGEGYDTLDAAADWAQ
SVLAANLPVLDSEDALMERGGVFALMGPTGVGKTTTTAKLAARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVPV
HAVKDGGDLQLALAELRNKHMVLIDTIGMSQRDRTVSDQIAMLHGADTPVQRLLLLNATSHGDTLNEVVQAYRSAAGQPR
SALPDLAGCILTKLDEASNLGGVLDTVIRYKLPVHYVSTGQKVPENLYVATKKFLLKSAFCAPREDSPFVPHDDDLPAML
SALSARTGNELHEVRFG

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=253, Percent_Identity=26.0869565217391, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 61247; Mature: 61247

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRKFIGPTSRDALRLVREAMGADAAVLSNRTLEDGRVEIVALPAAELAEISTRRAGDA
CCCHHHCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEECHHHHHHHHHHCCCCH
AAHGVAQPHAPRPGAQHAPAGPSFASPAASVVVPSAAASASASRAAANPYAAGGMPDVFS
HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
SVFGASVETSADDDTPPAVSMPAPPAQPAAAPSEPAPWLVEHAKRLTKQHEELVARPRAA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PTVPHAPRERAAADEAPEWARDIVRNAARRLPADEPSAAKPALRLPEDTAAVVADAVKAR
CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
IERIVNDTVMQELGSLRELMEEQFAGLMWNERQRRNPVHGALTKYLFAAGFSAQLVRMIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHH
DNLPEGEGYDTLDAAADWAQSVLAANLPVLDSEDALMERGGVFALMGPTGVGKTTTTAKL
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEECCCCCCCCHHHHHH
AARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVPVHAVKDGGDLQLALAELRNKH
HHHHHHHHCCCEEEEEEECCEECCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCC
MVLIDTIGMSQRDRTVSDQIAMLHGADTPVQRLLLLNATSHGDTLNEVVQAYRSAAGQPR
EEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCH
SALPDLAGCILTKLDEASNLGGVLDTVIRYKLPVHYVSTGQKVPENLYVATKKFLLKSAF
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHC
CAPREDSPFVPHDDDLPAMLSALSARTGNELHEVRFG
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure
MNIRKFIGPTSRDALRLVREAMGADAAVLSNRTLEDGRVEIVALPAAELAEISTRRAGDA
CCCHHHCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEECHHHHHHHHHHCCCCH
AAHGVAQPHAPRPGAQHAPAGPSFASPAASVVVPSAAASASASRAAANPYAAGGMPDVFS
HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
SVFGASVETSADDDTPPAVSMPAPPAQPAAAPSEPAPWLVEHAKRLTKQHEELVARPRAA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PTVPHAPRERAAADEAPEWARDIVRNAARRLPADEPSAAKPALRLPEDTAAVVADAVKAR
CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
IERIVNDTVMQELGSLRELMEEQFAGLMWNERQRRNPVHGALTKYLFAAGFSAQLVRMIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHH
DNLPEGEGYDTLDAAADWAQSVLAANLPVLDSEDALMERGGVFALMGPTGVGKTTTTAKL
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEECCCCCCCCHHHHHH
AARCVMRFGASKVALLTTDSYRIGGHEQLRIFGKILGVPVHAVKDGGDLQLALAELRNKH
HHHHHHHHCCCEEEEEEECCEECCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCC
MVLIDTIGMSQRDRTVSDQIAMLHGADTPVQRLLLLNATSHGDTLNEVVQAYRSAAGQPR
EEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCH
SALPDLAGCILTKLDEASNLGGVLDTVIRYKLPVHYVSTGQKVPENLYVATKKFLLKSAF
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHC
CAPREDSPFVPHDDDLPAMLSALSARTGNELHEVRFG
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]