Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

Click here to switch to the map view.

The map label for this gene is hitA [H]

Identifier: 83720872

GI number: 83720872

Start: 3426017

End: 3426382

Strand: Reverse

Name: hitA [H]

Synonym: BTH_I2983

Alternate gene names: 83720872

Gene position: 3426382-3426017 (Counterclockwise)

Preceding gene: 83720897

Following gene: 83719933

Centisome position: 89.95

GC content: 67.49

Gene sequence:

>366_bases
ATGAGTCACGACCCGAACTGCCTGTTCTGCAAGATCGCGGCAGGCGAGATTCCGAGCACGAAAGTGCACGAGGACGCCGA
GTTCGTCGCCTTCCGGGACATCCGGCCCGCGGCCGACACGCACGTGCTCGTGATACCGCGCAAGCATTTGCCGACGCTGT
CCGCCGTCACCACGGACGACGCGCCGCTGCTTGGTAGAATGATGGTTCTCGTCGCGCGGCTCGCCGAGCAGTTGGGCTGC
GCGTATACGGGCGGCGAAACCGGGTTCCGGACGGTGATCAACACCGGGCCGGGCGGCGGGCAGGAGGTCTACCACCTGCA
CGCGCATATTCTGGCCGGGCCGCGTCCGTGGCGCCGGATGGGGTGA

Upstream 100 bases:

>100_bases
CTGTACCGTATTATCAAAGGCTGGCTGTACCTGAACGACAACAAGACGCTCGATCCGCTGGCATGGTTCTGACGCCGCGG
AGCGTGCGTCGGGGAACATG

Downstream 100 bases:

>100_bases
GATGGCGGGTGGCCCGCCATCCGAACGAAGCCGGCACGGGGCCGGCGATTTGCGCCGCGAGACCGGCGAGGTTTAGGAGA
GTTTCATCATGGGCGGATTG

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSHDPNCLFCKIAAGEIPSTKVHEDAEFVAFRDIRPAADTHVLVIPRKHLPTLSAVTTDDAPLLGRMMVLVARLAEQLGC
AYTGGETGFRTVINTGPGGGQEVYHLHAHILAGPRPWRRMG

Sequences:

>Translated_121_residues
MSHDPNCLFCKIAAGEIPSTKVHEDAEFVAFRDIRPAADTHVLVIPRKHLPTLSAVTTDDAPLLGRMMVLVARLAEQLGC
AYTGGETGFRTVINTGPGGGQEVYHLHAHILAGPRPWRRMG
>Mature_120_residues
SHDPNCLFCKIAAGEIPSTKVHEDAEFVAFRDIRPAADTHVLVIPRKHLPTLSAVTTDDAPLLGRMMVLVARLAEQLGCA
YTGGETGFRTVINTGPGGGQEVYHLHAHILAGPRPWRRMG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=108, Percent_Identity=43.5185185185185, Blast_Score=95, Evalue=1e-20,
Organism=Homo sapiens, GI14211923, Length=107, Percent_Identity=37.3831775700935, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1787346, Length=112, Percent_Identity=46.4285714285714, Blast_Score=88, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17506713, Length=108, Percent_Identity=42.5925925925926, Blast_Score=97, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28574010, Length=108, Percent_Identity=47.2222222222222, Blast_Score=96, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24581222, Length=108, Percent_Identity=47.2222222222222, Blast_Score=96, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13123; Mature: 12992

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHDPNCLFCKIAAGEIPSTKVHEDAEFVAFRDIRPAADTHVLVIPRKHLPTLSAVTTDD
CCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEECCCC
APLLGRMMVLVARLAEQLGCAYTGGETGFRTVINTGPGGGQEVYHLHAHILAGPRPWRRM
CCHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCC
G
C
>Mature Secondary Structure 
SHDPNCLFCKIAAGEIPSTKVHEDAEFVAFRDIRPAADTHVLVIPRKHLPTLSAVTTDD
CCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEECCCC
APLLGRMMVLVARLAEQLGCAYTGGETGFRTVINTGPGGGQEVYHLHAHILAGPRPWRRM
CCHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA