| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is hitA [H]
Identifier: 83720872
GI number: 83720872
Start: 3426017
End: 3426382
Strand: Reverse
Name: hitA [H]
Synonym: BTH_I2983
Alternate gene names: 83720872
Gene position: 3426382-3426017 (Counterclockwise)
Preceding gene: 83720897
Following gene: 83719933
Centisome position: 89.95
GC content: 67.49
Gene sequence:
>366_bases ATGAGTCACGACCCGAACTGCCTGTTCTGCAAGATCGCGGCAGGCGAGATTCCGAGCACGAAAGTGCACGAGGACGCCGA GTTCGTCGCCTTCCGGGACATCCGGCCCGCGGCCGACACGCACGTGCTCGTGATACCGCGCAAGCATTTGCCGACGCTGT CCGCCGTCACCACGGACGACGCGCCGCTGCTTGGTAGAATGATGGTTCTCGTCGCGCGGCTCGCCGAGCAGTTGGGCTGC GCGTATACGGGCGGCGAAACCGGGTTCCGGACGGTGATCAACACCGGGCCGGGCGGCGGGCAGGAGGTCTACCACCTGCA CGCGCATATTCTGGCCGGGCCGCGTCCGTGGCGCCGGATGGGGTGA
Upstream 100 bases:
>100_bases CTGTACCGTATTATCAAAGGCTGGCTGTACCTGAACGACAACAAGACGCTCGATCCGCTGGCATGGTTCTGACGCCGCGG AGCGTGCGTCGGGGAACATG
Downstream 100 bases:
>100_bases GATGGCGGGTGGCCCGCCATCCGAACGAAGCCGGCACGGGGCCGGCGATTTGCGCCGCGAGACCGGCGAGGTTTAGGAGA GTTTCATCATGGGCGGATTG
Product: HIT family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSHDPNCLFCKIAAGEIPSTKVHEDAEFVAFRDIRPAADTHVLVIPRKHLPTLSAVTTDDAPLLGRMMVLVARLAEQLGC AYTGGETGFRTVINTGPGGGQEVYHLHAHILAGPRPWRRMG
Sequences:
>Translated_121_residues MSHDPNCLFCKIAAGEIPSTKVHEDAEFVAFRDIRPAADTHVLVIPRKHLPTLSAVTTDDAPLLGRMMVLVARLAEQLGC AYTGGETGFRTVINTGPGGGQEVYHLHAHILAGPRPWRRMG >Mature_120_residues SHDPNCLFCKIAAGEIPSTKVHEDAEFVAFRDIRPAADTHVLVIPRKHLPTLSAVTTDDAPLLGRMMVLVARLAEQLGCA YTGGETGFRTVINTGPGGGQEVYHLHAHILAGPRPWRRMG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI4885413, Length=108, Percent_Identity=43.5185185185185, Blast_Score=95, Evalue=1e-20, Organism=Homo sapiens, GI14211923, Length=107, Percent_Identity=37.3831775700935, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1787346, Length=112, Percent_Identity=46.4285714285714, Blast_Score=88, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17506713, Length=108, Percent_Identity=42.5925925925926, Blast_Score=97, Evalue=2e-21, Organism=Drosophila melanogaster, GI28574010, Length=108, Percent_Identity=47.2222222222222, Blast_Score=96, Evalue=6e-21, Organism=Drosophila melanogaster, GI24581222, Length=108, Percent_Identity=47.2222222222222, Blast_Score=96, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13123; Mature: 12992
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHDPNCLFCKIAAGEIPSTKVHEDAEFVAFRDIRPAADTHVLVIPRKHLPTLSAVTTDD CCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEECCCC APLLGRMMVLVARLAEQLGCAYTGGETGFRTVINTGPGGGQEVYHLHAHILAGPRPWRRM CCHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCC G C >Mature Secondary Structure SHDPNCLFCKIAAGEIPSTKVHEDAEFVAFRDIRPAADTHVLVIPRKHLPTLSAVTTDD CCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEECCCC APLLGRMMVLVARLAEQLGCAYTGGETGFRTVINTGPGGGQEVYHLHAHILAGPRPWRRM CCHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA