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The map label for this gene is tse [H]

Identifier: 83720865

GI number: 83720865

Start: 3625822

End: 3627822

Strand: Reverse

Name: tse [H]

Synonym: BTH_I3180

Alternate gene names: 83720865

Gene position: 3627822-3625822 (Counterclockwise)

Preceding gene: 83719095

Following gene: 83718451

Centisome position: 95.24

GC content: 71.56

Gene sequence:

>2001_bases
ATGCTGCACAACTGGTCGATCCGCACGACGCTGACGGCCGTCGGATTCATGCTGGTGCTCGTCGCCGCGCTGGTCGGCGG
GCTCGGGCTGTATGCGCTCAATCACGCGAGCCGCTCGCTCGACGCGATCGCGCACGGCGATCTGCCGACGATCCACACGC
TCGACGACGCGTCGTCGTACCTGCTGCGCTCGCGCGTCGCGCTCGACCGCTTCAAGACGCTGTCCGAGGCCGGCAACGCC
GACGAGGCGAAGAAGGTGCTCGCGCGCGCGCAGGAGCTTTACGCGAAGTCGACGCAGAACTGGCAGGCGTATGTCGCCGC
GTCGAAGGAGGGCATCGAGCCGGCGCTGACCGACGAGCTCGCCGCGCGCTACACGACGCTCGCGAAGGAAGGCGTCGAGC
CGGAATTCGCCGCCGCGGGCGCGGGCGACCTCGCCGCGTATCACGCGATCGCCGACACGAAAATCAGCCCGATGTTCGTT
GCGTACGACAAGGCGGCGGCCGCTGTGATCGCCGCGTATTCGAGGCGCGCGGAATCGCGCTTCGACGCGACGCAGGCGCG
CATCTCACTGATGATCGCGCTGATCGCGGCGGGCATCGCCGCCGCGTTCCTGATGGTGATCGGCATCCGCTTCGCGCTGC
GCGGGCTCATCGTGCAGCCGCTGAACATCGCGATCGCGCAGTTCGAGCGGATCGCGGCGGGCGACCTCACGCAGGCGACG
CAAGTCGCCGGCAACAACGAGATCGGCCGGCTGTTCCAGGGCATCGGCCGGATGCAGGCGGCCGTCGCCGACATGGTGAA
GGCCGTGCATCGCGGGGCGGAAGCGGTCGACGTCGGCGCGCGCGAGATCTCGAGCGGCAACGCGGACTTGTCCGCACGCA
CCGAATCGCAGGCGGCCTCACTGCAGGAAACCGCGTCGAGCATGGAGCAACTGACGGGCACCGTGCGCCAGAACGCGGAG
AACGCGCGGCAGGCGAGCCAGCTCGCGGTGAACGCGTCCGACATCGCGACGCAGGGCGGCGATGTCGTCGGCCAGGTCGT
CACGACGATGCAGGACATCGCGACGAGCTCGACGAAGGTGGCCGACATCATCGGCACGATCGAAGGAATCGCGTTCCAGA
CCAACATCCTCGCGCTGAACGCGGCCGTCGAGGCGGCGCGCGCGGGCGAGCAGGGGCGCGGCTTCGCGGTCGTCGCGGGC
GAGGTGCGCTCGCTTGCACAGCGCAGCGCGACGGCCGCCAAGGAGATCAAGCAGTTGATCGGCGACTCCGCGCACAAGGT
GCAAAGCGGCTCCGCGCTCGTCGAGCGCGCGGGCGCGACGATGGCGGAGATCGTCCAGGCGGTGCGCCGCGTGACCGACA
TCATGGGCGAGATCAGCGCGGCGTCCGAAGAGCAGTCGACGGGCATCGTCCAGGTGAATCGCGCGGTCAGCCAGATGGAC
GCCGTCACCCAGCAGAACGCGGCGCTCGTCGAGGAAGCCGCGGCCGCGGCCGCGTCGCTCGAGGATCAGACGCGGCAGAT
GAAGCAGATCGTGTCGGCGTGGCGCGTCGAAGGCGGGATTGCGCCGGCGGCTTCGAGCGTGCGCTCGAACGTGACCGGCC
GCGCGAGCGAGCCGCACGCCGCCGCATCCGCGTCCGCGTCCGCATCCGCGTCGCACGCCTCGAGCGCGACCGCAACGGCC
GGCGCGTCCGGGTCGTCGCGGGCGTCGGCGGCCGCCGCACACGGTGAGCGTGCGTCGCACGCCGCCGCGCCGCATGCCGC
GAAGACTACCGTCGCCGCGCCGAAATCCGCCGCATCGCCGGCGTCGCCCGCCTATGCGCCGAAGCTCGCGAAGCCCGGCG
CCGCCGCGCGCGCCGCAACGGGCGCGGCGGCGAGCACGGCCGCCGTCGCGCCGCAAGCCGCCCCCGCGTCCTCCTTCGCG
CTCAAGCGCCCGGCGCTGTCGGGCGAGCCGAAGCCCGCGGCCGCGTCGGCATCCTCCGACGACGACTGGGAAACCTTCTA
A

Upstream 100 bases:

>100_bases
GACATCGAGAAGCTGATGACGAGCAAGGAGATGGCGCTGATCGAGACGCTCGGCGCATAAGCGGGCGCGACGCACGCAAC
GCAACTACGGGGAGCTGACG

Downstream 100 bases:

>100_bases
GCCATGATGCCCGCACGCGCCGCCTCTCGTCTCGACGCACTCGAACCGCAGGAACGGTCGGGCGATGCTGCGCGGGACTT
CGAATTCACGTCCGCGGATT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MLHNWSIRTTLTAVGFMLVLVAALVGGLGLYALNHASRSLDAIAHGDLPTIHTLDDASSYLLRSRVALDRFKTLSEAGNA
DEAKKVLARAQELYAKSTQNWQAYVAASKEGIEPALTDELAARYTTLAKEGVEPEFAAAGAGDLAAYHAIADTKISPMFV
AYDKAAAAVIAAYSRRAESRFDATQARISLMIALIAAGIAAAFLMVIGIRFALRGLIVQPLNIAIAQFERIAAGDLTQAT
QVAGNNEIGRLFQGIGRMQAAVADMVKAVHRGAEAVDVGAREISSGNADLSARTESQAASLQETASSMEQLTGTVRQNAE
NARQASQLAVNASDIATQGGDVVGQVVTTMQDIATSSTKVADIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRSLAQRSATAAKEIKQLIGDSAHKVQSGSALVERAGATMAEIVQAVRRVTDIMGEISAASEEQSTGIVQVNRAVSQMD
AVTQQNAALVEEAAAAAASLEDQTRQMKQIVSAWRVEGGIAPAASSVRSNVTGRASEPHAAASASASASASHASSATATA
GASGSSRASAAAAHGERASHAAAPHAAKTTVAAPKSAASPASPAYAPKLAKPGAAARAATGAAASTAAVAPQAAPASSFA
LKRPALSGEPKPAAASASSDDDWETF

Sequences:

>Translated_666_residues
MLHNWSIRTTLTAVGFMLVLVAALVGGLGLYALNHASRSLDAIAHGDLPTIHTLDDASSYLLRSRVALDRFKTLSEAGNA
DEAKKVLARAQELYAKSTQNWQAYVAASKEGIEPALTDELAARYTTLAKEGVEPEFAAAGAGDLAAYHAIADTKISPMFV
AYDKAAAAVIAAYSRRAESRFDATQARISLMIALIAAGIAAAFLMVIGIRFALRGLIVQPLNIAIAQFERIAAGDLTQAT
QVAGNNEIGRLFQGIGRMQAAVADMVKAVHRGAEAVDVGAREISSGNADLSARTESQAASLQETASSMEQLTGTVRQNAE
NARQASQLAVNASDIATQGGDVVGQVVTTMQDIATSSTKVADIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRSLAQRSATAAKEIKQLIGDSAHKVQSGSALVERAGATMAEIVQAVRRVTDIMGEISAASEEQSTGIVQVNRAVSQMD
AVTQQNAALVEEAAAAAASLEDQTRQMKQIVSAWRVEGGIAPAASSVRSNVTGRASEPHAAASASASASASHASSATATA
GASGSSRASAAAAHGERASHAAAPHAAKTTVAAPKSAASPASPAYAPKLAKPGAAARAATGAAASTAAVAPQAAPASSFA
LKRPALSGEPKPAAASASSDDDWETF
>Mature_666_residues
MLHNWSIRTTLTAVGFMLVLVAALVGGLGLYALNHASRSLDAIAHGDLPTIHTLDDASSYLLRSRVALDRFKTLSEAGNA
DEAKKVLARAQELYAKSTQNWQAYVAASKEGIEPALTDELAARYTTLAKEGVEPEFAAAGAGDLAAYHAIADTKISPMFV
AYDKAAAAVIAAYSRRAESRFDATQARISLMIALIAAGIAAAFLMVIGIRFALRGLIVQPLNIAIAQFERIAAGDLTQAT
QVAGNNEIGRLFQGIGRMQAAVADMVKAVHRGAEAVDVGAREISSGNADLSARTESQAASLQETASSMEQLTGTVRQNAE
NARQASQLAVNASDIATQGGDVVGQVVTTMQDIATSSTKVADIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRSLAQRSATAAKEIKQLIGDSAHKVQSGSALVERAGATMAEIVQAVRRVTDIMGEISAASEEQSTGIVQVNRAVSQMD
AVTQQNAALVEEAAAAAASLEDQTRQMKQIVSAWRVEGGIAPAASSVRSNVTGRASEPHAAASASASASASHASSATATA
GASGSSRASAAAAHGERASHAAAPHAAKTTVAAPKSAASPASPAYAPKLAKPGAAARAATGAAASTAAVAPQAAPASSFA
LKRPALSGEPKPAAASASSDDDWETF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=519, Percent_Identity=43.5452793834297, Blast_Score=335, Evalue=5e-93,
Organism=Escherichia coli, GI2367378, Length=495, Percent_Identity=43.8383838383838, Blast_Score=335, Evalue=5e-93,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=62.0915032679739, Blast_Score=333, Evalue=3e-92,
Organism=Escherichia coli, GI1788194, Length=537, Percent_Identity=41.1545623836127, Blast_Score=326, Evalue=3e-90,
Organism=Escherichia coli, GI1789453, Length=325, Percent_Identity=38.4615384615385, Blast_Score=218, Evalue=9e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 67892; Mature: 67892

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHNWSIRTTLTAVGFMLVLVAALVGGLGLYALNHASRSLDAIAHGDLPTIHTLDDASSY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHH
LLRSRVALDRFKTLSEAGNADEAKKVLARAQELYAKSTQNWQAYVAASKEGIEPALTDEL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHH
AARYTTLAKEGVEPEFAAAGAGDLAAYHAIADTKISPMFVAYDKAAAAVIAAYSRRAESR
HHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
FDATQARISLMIALIAAGIAAAFLMVIGIRFALRGLIVQPLNIAIAQFERIAAGDLTQAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QVAGNNEIGRLFQGIGRMQAAVADMVKAVHRGAEAVDVGAREISSGNADLSARTESQAAS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH
LQETASSMEQLTGTVRQNAENARQASQLAVNASDIATQGGDVVGQVVTTMQDIATSSTKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHH
ADIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKQLI
HHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
GDSAHKVQSGSALVERAGATMAEIVQAVRRVTDIMGEISAASEEQSTGIVQVNRAVSQMD
CCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHH
AVTQQNAALVEEAAAAAASLEDQTRQMKQIVSAWRVEGGIAPAASSVRSNVTGRASEPHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCH
AASASASASASHASSATATAGASGSSRASAAAAHGERASHAAAPHAAKTTVAAPKSAASP
HHCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCHHHHHCCCCCCCCCC
ASPAYAPKLAKPGAAARAATGAAASTAAVAPQAAPASSFALKRPALSGEPKPAAASASSD
CCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
DDWETF
CCCCCC
>Mature Secondary Structure
MLHNWSIRTTLTAVGFMLVLVAALVGGLGLYALNHASRSLDAIAHGDLPTIHTLDDASSY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHH
LLRSRVALDRFKTLSEAGNADEAKKVLARAQELYAKSTQNWQAYVAASKEGIEPALTDEL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHH
AARYTTLAKEGVEPEFAAAGAGDLAAYHAIADTKISPMFVAYDKAAAAVIAAYSRRAESR
HHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
FDATQARISLMIALIAAGIAAAFLMVIGIRFALRGLIVQPLNIAIAQFERIAAGDLTQAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QVAGNNEIGRLFQGIGRMQAAVADMVKAVHRGAEAVDVGAREISSGNADLSARTESQAAS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH
LQETASSMEQLTGTVRQNAENARQASQLAVNASDIATQGGDVVGQVVTTMQDIATSSTKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHH
ADIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKQLI
HHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
GDSAHKVQSGSALVERAGATMAEIVQAVRRVTDIMGEISAASEEQSTGIVQVNRAVSQMD
CCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHH
AVTQQNAALVEEAAAAAASLEDQTRQMKQIVSAWRVEGGIAPAASSVRSNVTGRASEPHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCH
AASASASASASHASSATATAGASGSSRASAAAAHGERASHAAAPHAAKTTVAAPKSAASP
HHCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCHHHHHCCCCCCCCCC
ASPAYAPKLAKPGAAARAATGAAASTAAVAPQAAPASSFALKRPALSGEPKPAAASASSD
CCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
DDWETF
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]