| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is hisQ [H]
Identifier: 83720821
GI number: 83720821
Start: 1015158
End: 1015847
Strand: Reverse
Name: hisQ [H]
Synonym: BTH_I0889
Alternate gene names: 83720821
Gene position: 1015847-1015158 (Counterclockwise)
Preceding gene: 83718624
Following gene: 83721356
Centisome position: 26.67
GC content: 63.48
Gene sequence:
>690_bases ATGTTTCTTCAAGGCTACGGCCCGCTGATACTCTCCGGCACCTGGCAGACCGTCAAGCTCGCGGTGCTGTCGCTCGCGCT GTCGTTCCTGCTCGGCCTCGTCGGCGCGGCGGCGAAACTGTCGAGGAACCGCATCTCGAACGGCATCGGCACGCTCTACA CGACGCTCATCCGCGGCGTGCCGGACCTCGTGCTGATGCTGCTTCTCTTCTACAGCCTGCAGATCTGGCTGAACCAGTTC ACCGACCTGATGAACTGGGATCAGATCGACATCGATCCGTTCGCGGCCGGCGTGCTCGTGCTCGGCTTCATCTACGGCGC GTACTTCACCGAGACGTTCCGCGGCGCGTTCCTGTCGGTGCCGCGCGGCCAGCTCGAGGCGGGCAGCGCGTACGGGATGA CGGACTGGCAGGTGTTCGCGCGGATCATGTTCCCGCAGATGATGCGCTTCGCGCTGCCCGGCATCGGCAACAACTGGCAA GTGCTCGTGAAGTCGACGGCGCTCGTGTCGATCATCGGCTTGGCCGACGTCGTGAAGGCGTCGCAGGACGCGGGCAAGGG CACGCTGCGGTTCTTCTTCTTCACGCTGCTTGCGGGCGCGATCTATCTCGCGATCACGACGATCTCGAACTTCGTGCTGA TGTGGCTCGAGAAGCGTTATTCGACGGGCGTACGCAAGGCTGACCTATGA
Upstream 100 bases:
>100_bases GCCCGCGAAAGCGGAACGGCGATGATACGCACGGGGCGTCTCGCGCAACACGCGGGGCGCGTCTTTCGCGGCGCGCACGA CGCGCCGTCAAGGACTACAT
Downstream 100 bases:
>100_bases TCGAACTGATCCAAGAATACTGGCGCAATTACCTGTATACGGACGGGTATCGCTTCACCGGCCTCGCGATCACGCTGTGG CTGCTCGTCGTGTCGATCGG
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MFLQGYGPLILSGTWQTVKLAVLSLALSFLLGLVGAAAKLSRNRISNGIGTLYTTLIRGVPDLVLMLLLFYSLQIWLNQF TDLMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTDWQVFARIMFPQMMRFALPGIGNNWQ VLVKSTALVSIIGLADVVKASQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRKADL
Sequences:
>Translated_229_residues MFLQGYGPLILSGTWQTVKLAVLSLALSFLLGLVGAAAKLSRNRISNGIGTLYTTLIRGVPDLVLMLLLFYSLQIWLNQF TDLMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTDWQVFARIMFPQMMRFALPGIGNNWQ VLVKSTALVSIIGLADVVKASQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRKADL >Mature_229_residues MFLQGYGPLILSGTWQTVKLAVLSLALSFLLGLVGAAAKLSRNRISNGIGTLYTTLIRGVPDLVLMLLLFYSLQIWLNQF TDLMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTDWQVFARIMFPQMMRFALPGIGNNWQ VLVKSTALVSIIGLADVVKASQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRKADL
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=227, Percent_Identity=62.5550660792952, Blast_Score=289, Evalue=1e-79, Organism=Escherichia coli, GI1787087, Length=225, Percent_Identity=34.2222222222222, Blast_Score=131, Evalue=4e-32, Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=31.6037735849057, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1788226, Length=221, Percent_Identity=28.9592760180996, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788645, Length=219, Percent_Identity=30.1369863013699, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1786874, Length=181, Percent_Identity=31.4917127071823, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1786873, Length=213, Percent_Identity=27.6995305164319, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI87082239, Length=214, Percent_Identity=25.2336448598131, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25291; Mature: 25291
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLQGYGPLILSGTWQTVKLAVLSLALSFLLGLVGAAAKLSRNRISNGIGTLYTTLIRGV CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDLVLMLLLFYSLQIWLNQFTDLMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRGQLEAGSAYGMTDWQVFARIMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVKA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRKADL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFLQGYGPLILSGTWQTVKLAVLSLALSFLLGLVGAAAKLSRNRISNGIGTLYTTLIRGV CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDLVLMLLLFYSLQIWLNQFTDLMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRGQLEAGSAYGMTDWQVFARIMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVKA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRKADL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]