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The map label for this gene is yhbU [H]

Identifier: 83720783

GI number: 83720783

Start: 2022908

End: 2023942

Strand: Direct

Name: yhbU [H]

Synonym: BTH_I1804

Alternate gene names: 83720783

Gene position: 2022908-2023942 (Clockwise)

Preceding gene: 83721146

Following gene: 83719238

Centisome position: 53.11

GC content: 68.12

Gene sequence:

>1035_bases
ATGACGCAAAGCAGCCACTTCGCGACGGGCGCCGCGCCGATCGAACTCGTGTGCCCGGCGGGCAGCCTGCCCGCGCTGAA
GGCCGCGGTCGACAACGGCGCGGACTGCGTGTATCTCGGTTTTCGCGACGCGACGAACGCGCGCAACTTCGCCGGCCTGA
ACTTCGACGCGCAGGCGATCGACGCCGGCATTCGCTACGCGCGCGAGCGCGGCCGCAAGGTGCTCGTCGCGCTCAACACG
TATCCGCAGCCGGACGGCTGGGCCGCATGGCGGGAAGCGGTCGGCCGCGCGGCCGACGCGGGCGTCGACGCGATCATCGT
CGCCGATCCGGGGCTCATGCGTTTCGCGCGCGAGCGCTATCCGGACCTGCGGCTGCACCTGTCGGTGCAGGGCTCGGCGA
CGAACTACGAGGCGATCAACTTCTATCACGAGCACTTCGGCATATCGCGCGCGGTGCTGCCGCGCGTGCTGTCGCTCGCG
CAGGTCGAGCAGGTGACCGAAAACACGCCGGTCGAAATCGAGGTGTTCGGCTTCGGCAGTCTGTGCGTGATGGTCGAGGG
GCGCTGCGCGCTGTCGTCGTACGCGACGGGCGAATCGCCGAACACGCGCGGCGTGTGCTCGCCCGCGAAGGCGGTGCGCT
GGCAGAAGACGCCGGACGGCCTCGAATCGCGGCTGAACGGCGTGCTGATCGACCGTTACGAAGACGGCGAGAACGCCGGC
TATCCGACGCTCTGCAAGGGGCGCTTCACGGTGGCCGACGAGAGCTACTACGCGATCGAGGAGCCGACGAGCCTGAACAC
GCTCGAACTGCTGCCGAAGCTGATGCAGATCGGCATACGGGCGATCAAGATCGAAGGCCGTCAGCGCAGCCCCGCGTACG
TCGCGCAGGTGACGCGCGTCTGGCGCGACGCGATCGATCAGTGCGCATCGAACCTCGCGCGCTACTACGTGAAGCCCGCG
TGGATGACGGAACTGAACAAGGTCGCGGAAGGGCAGCAGCATACGCTCGGCGCCTACCACCGGCCGTGGAAATGA

Upstream 100 bases:

>100_bases
CGCACTGGGCTGACGCCGCCCGCTTCGGGCGACGCCCGTTTCCGCCGCTCGCCGACACGCCGCGAGCGGTTTCTCGTTTC
TTTGATGGAGCCGTCATGCC

Downstream 100 bases:

>100_bases
CACGCACGACGGCGCATGCCTGAATGCGGGAGCGAGGATCATGAAAATTGCTTTGGGCCCGGTGCAGTACTACTGGCCGC
GCATCGCGACGATGCAGTTC

Product: U32 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTQSSHFATGAAPIELVCPAGSLPALKAAVDNGADCVYLGFRDATNARNFAGLNFDAQAIDAGIRYARERGRKVLVALNT
YPQPDGWAAWREAVGRAADAGVDAIIVADPGLMRFARERYPDLRLHLSVQGSATNYEAINFYHEHFGISRAVLPRVLSLA
QVEQVTENTPVEIEVFGFGSLCVMVEGRCALSSYATGESPNTRGVCSPAKAVRWQKTPDGLESRLNGVLIDRYEDGENAG
YPTLCKGRFTVADESYYAIEEPTSLNTLELLPKLMQIGIRAIKIEGRQRSPAYVAQVTRVWRDAIDQCASNLARYYVKPA
WMTELNKVAEGQQHTLGAYHRPWK

Sequences:

>Translated_344_residues
MTQSSHFATGAAPIELVCPAGSLPALKAAVDNGADCVYLGFRDATNARNFAGLNFDAQAIDAGIRYARERGRKVLVALNT
YPQPDGWAAWREAVGRAADAGVDAIIVADPGLMRFARERYPDLRLHLSVQGSATNYEAINFYHEHFGISRAVLPRVLSLA
QVEQVTENTPVEIEVFGFGSLCVMVEGRCALSSYATGESPNTRGVCSPAKAVRWQKTPDGLESRLNGVLIDRYEDGENAG
YPTLCKGRFTVADESYYAIEEPTSLNTLELLPKLMQIGIRAIKIEGRQRSPAYVAQVTRVWRDAIDQCASNLARYYVKPA
WMTELNKVAEGQQHTLGAYHRPWK
>Mature_343_residues
TQSSHFATGAAPIELVCPAGSLPALKAAVDNGADCVYLGFRDATNARNFAGLNFDAQAIDAGIRYARERGRKVLVALNTY
PQPDGWAAWREAVGRAADAGVDAIIVADPGLMRFARERYPDLRLHLSVQGSATNYEAINFYHEHFGISRAVLPRVLSLAQ
VEQVTENTPVEIEVFGFGSLCVMVEGRCALSSYATGESPNTRGVCSPAKAVRWQKTPDGLESRLNGVLIDRYEDGENAGY
PTLCKGRFTVADESYYAIEEPTSLNTLELLPKLMQIGIRAIKIEGRQRSPAYVAQVTRVWRDAIDQCASNLARYYVKPAW
MTELNKVAEGQQHTLGAYHRPWK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=331, Percent_Identity=61.9335347432024, Blast_Score=448, Evalue=1e-127,
Organism=Escherichia coli, GI1788397, Length=343, Percent_Identity=32.3615160349854, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI87081910, Length=320, Percent_Identity=30, Blast_Score=104, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 37829; Mature: 37698

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSSHFATGAAPIELVCPAGSLPALKAAVDNGADCVYLGFRDATNARNFAGLNFDAQAI
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHH
DAGIRYARERGRKVLVALNTYPQPDGWAAWREAVGRAADAGVDAIIVADPGLMRFARERY
HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCHHCCCCCEEEEECCHHHHHHHHCC
PDLRLHLSVQGSATNYEAINFYHEHFGISRAVLPRVLSLAQVEQVTENTPVEIEVFGFGS
CCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
LCVMVEGRCALSSYATGESPNTRGVCSPAKAVRWQKTPDGLESRLNGVLIDRYEDGENAG
EEEEEECCHHEHHCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHCCEEEEEEECCCCCC
YPTLCKGRFTVADESYYAIEEPTSLNTLELLPKLMQIGIRAIKIEGRQRSPAYVAQVTRV
CCCEECCEEEEECCCEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHH
WRDAIDQCASNLARYYVKPAWMTELNKVAEGQQHTLGAYHRPWK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCCCCCCC
>Mature Secondary Structure 
TQSSHFATGAAPIELVCPAGSLPALKAAVDNGADCVYLGFRDATNARNFAGLNFDAQAI
CCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHH
DAGIRYARERGRKVLVALNTYPQPDGWAAWREAVGRAADAGVDAIIVADPGLMRFARERY
HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCHHCCCCCEEEEECCHHHHHHHHCC
PDLRLHLSVQGSATNYEAINFYHEHFGISRAVLPRVLSLAQVEQVTENTPVEIEVFGFGS
CCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
LCVMVEGRCALSSYATGESPNTRGVCSPAKAVRWQKTPDGLESRLNGVLIDRYEDGENAG
EEEEEECCHHEHHCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHCCEEEEEEECCCCCC
YPTLCKGRFTVADESYYAIEEPTSLNTLELLPKLMQIGIRAIKIEGRQRSPAYVAQVTRV
CCCEECCEEEEECCCEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHH
WRDAIDQCASNLARYYVKPAWMTELNKVAEGQQHTLGAYHRPWK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]