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The map label for this gene is aaeR [H]

Identifier: 83720712

GI number: 83720712

Start: 2986541

End: 2987482

Strand: Reverse

Name: aaeR [H]

Synonym: BTH_I2624

Alternate gene names: 83720712

Gene position: 2987482-2986541 (Counterclockwise)

Preceding gene: 83720882

Following gene: 83720000

Centisome position: 78.43

GC content: 67.94

Gene sequence:

>942_bases
ATGGATACGCTCCAAAACATGCGTGTGTTCGTTCGCGTGGTCGATGCGGGCAGCTTCACGGCGGCGGCGCAGCAGCTCAA
TACGACGACCGCGTACGCGTCGCGCGCGGTGTCCGATCTCGAGGCGCACCTGCGCACGCGTCTTTTGAACCGTACGACGC
GGCGCATCGCGCTCACCGAGGCGGGCGAGCGCTATCTGCAGCGCTGCGAGCAGATCCTCGCATACGTCGAGCAGGCGGAG
GCCGAGGCGAGCGACGCGCATGCGCGCCCGTCCGGCAAGCTGAAGGTGCACTGCATGACGAGCCTCGGCCAGCACTACAC
GGTGCCCGCGGTGTCGCGCTACCGGCAGCGCTATCCGGAGGTCCAGGTCGACCTGACGCTCGCGCAGCGGCTGCCGGATC
TTCTCGACGAAGGCTTCGACGTGTCGCTCGTCGTCGGCCGCGAACTGCCCGATTCGGGGCTCGTGTCGCAGCGGCTCGGC
GAGACGTTCAGCGTCGTCTGTGCGTCGCGCGGCTACATCGAGACGCACGGCGCGCCGCAGCGGCCGCAGGATCTCGCGGG
CCACGTGTGCCTCGGGATGGTCGCGCCGGGCCTGTACTGGGACGAATGGAAACTGATGGGGCCGCACGGCGAGGAGAGCG
TGACGCTCGCGCCGCCGCCGTTTCGCGTGAACGTCGCGGAAGCGCTCGCGGCCGGCATCCGCGAGGGAATGGGCATCGGC
GTTCTGCCGCTCTATTCGGCGATCGCCGGGCTGCGCCACGGCGATTTCGTGCGCGTGATGCCCGAATACCGTTCGCACGT
GATGAACATCTACGCGCTCTATGCATCGCGCCAGTATCTCGATGCGAAGATCCGCACGTGGGTCGATTTCCTGCGCGACG
AGCTGCCGTCGATCCTCGAAGCCGACGAAGCGGCGCTCGAGCGCTTCACCGTGCAGACCTGA

Upstream 100 bases:

>100_bases
CCGAATAAACCGACAATGGTGCAACGCATTCTTACTGTCATTGAGATAATATTGGTGGATCTTTATGCAACAATCCTCCC
GGATTCAATAGGGAAATAGC

Downstream 100 bases:

>100_bases
CGGTAACGCGGCGCGCGACGCGGAATTGACGCATTTTGACGCTGTCGCAACACTTTCTTACGTTCACGCCGCGCCGGGTT
TGCTACTGTCTTCCCATGCA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MDTLQNMRVFVRVVDAGSFTAAAQQLNTTTAYASRAVSDLEAHLRTRLLNRTTRRIALTEAGERYLQRCEQILAYVEQAE
AEASDAHARPSGKLKVHCMTSLGQHYTVPAVSRYRQRYPEVQVDLTLAQRLPDLLDEGFDVSLVVGRELPDSGLVSQRLG
ETFSVVCASRGYIETHGAPQRPQDLAGHVCLGMVAPGLYWDEWKLMGPHGEESVTLAPPPFRVNVAEALAAGIREGMGIG
VLPLYSAIAGLRHGDFVRVMPEYRSHVMNIYALYASRQYLDAKIRTWVDFLRDELPSILEADEAALERFTVQT

Sequences:

>Translated_313_residues
MDTLQNMRVFVRVVDAGSFTAAAQQLNTTTAYASRAVSDLEAHLRTRLLNRTTRRIALTEAGERYLQRCEQILAYVEQAE
AEASDAHARPSGKLKVHCMTSLGQHYTVPAVSRYRQRYPEVQVDLTLAQRLPDLLDEGFDVSLVVGRELPDSGLVSQRLG
ETFSVVCASRGYIETHGAPQRPQDLAGHVCLGMVAPGLYWDEWKLMGPHGEESVTLAPPPFRVNVAEALAAGIREGMGIG
VLPLYSAIAGLRHGDFVRVMPEYRSHVMNIYALYASRQYLDAKIRTWVDFLRDELPSILEADEAALERFTVQT
>Mature_313_residues
MDTLQNMRVFVRVVDAGSFTAAAQQLNTTTAYASRAVSDLEAHLRTRLLNRTTRRIALTEAGERYLQRCEQILAYVEQAE
AEASDAHARPSGKLKVHCMTSLGQHYTVPAVSRYRQRYPEVQVDLTLAQRLPDLLDEGFDVSLVVGRELPDSGLVSQRLG
ETFSVVCASRGYIETHGAPQRPQDLAGHVCLGMVAPGLYWDEWKLMGPHGEESVTLAPPPFRVNVAEALAAGIREGMGIG
VLPLYSAIAGLRHGDFVRVMPEYRSHVMNIYALYASRQYLDAKIRTWVDFLRDELPSILEADEAALERFTVQT

Specific function: Activates transcription of the aaeXAB operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789639, Length=294, Percent_Identity=35.0340136054422, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1786401, Length=296, Percent_Identity=32.7702702702703, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI87081978, Length=289, Percent_Identity=31.1418685121107, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1789440, Length=287, Percent_Identity=30.3135888501742, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI145693193, Length=303, Percent_Identity=28.3828382838284, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1787128, Length=292, Percent_Identity=26.027397260274, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1787589, Length=291, Percent_Identity=24.7422680412371, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789173, Length=189, Percent_Identity=29.6296296296296, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI145693105, Length=120, Percent_Identity=27.5, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787879, Length=153, Percent_Identity=30.718954248366, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788481, Length=148, Percent_Identity=29.7297297297297, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786448, Length=297, Percent_Identity=21.2121212121212, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787601, Length=213, Percent_Identity=23.943661971831, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1788748, Length=120, Percent_Identity=30, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34830; Mature: 34830

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLQNMRVFVRVVDAGSFTAAAQQLNTTTAYASRAVSDLEAHLRTRLLNRTTRRIALTE
CCCHHHHEEHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGERYLQRCEQILAYVEQAEAEASDAHARPSGKLKVHCMTSLGQHYTVPAVSRYRQRYPE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHCCC
VQVDLTLAQRLPDLLDEGFDVSLVVGRELPDSGLVSQRLGETFSVVCASRGYIETHGAPQ
EEEEHHHHHHCHHHHHCCCCEEEEECCCCCCCCHHHHHHCHHHHHHHHCCCEEECCCCCC
RPQDLAGHVCLGMVAPGLYWDEWKLMGPHGEESVTLAPPPFRVNVAEALAAGIREGMGIG
CCHHHHHHHHHHHHCCCCEECCEEEECCCCCCCEEECCCCCEEEHHHHHHHHHHHCCCCC
VLPLYSAIAGLRHGDFVRVMPEYRSHVMNIYALYASRQYLDAKIRTWVDFLRDELPSILE
HHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADEAALERFTVQT
HHHHHHHHHCCCC
>Mature Secondary Structure
MDTLQNMRVFVRVVDAGSFTAAAQQLNTTTAYASRAVSDLEAHLRTRLLNRTTRRIALTE
CCCHHHHEEHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGERYLQRCEQILAYVEQAEAEASDAHARPSGKLKVHCMTSLGQHYTVPAVSRYRQRYPE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCCCHHHHHHHHHCCC
VQVDLTLAQRLPDLLDEGFDVSLVVGRELPDSGLVSQRLGETFSVVCASRGYIETHGAPQ
EEEEHHHHHHCHHHHHCCCCEEEEECCCCCCCCHHHHHHCHHHHHHHHCCCEEECCCCCC
RPQDLAGHVCLGMVAPGLYWDEWKLMGPHGEESVTLAPPPFRVNVAEALAAGIREGMGIG
CCHHHHHHHHHHHHCCCCEECCEEEECCCCCCCEEECCCCCEEEHHHHHHHHHHHCCCCC
VLPLYSAIAGLRHGDFVRVMPEYRSHVMNIYALYASRQYLDAKIRTWVDFLRDELPSILE
HHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADEAALERFTVQT
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]