| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720665
Identifier: 83720665
GI number: 83720665
Start: 1599022
End: 1600356
Strand: Reverse
Name: 83720665
Synonym: BTH_I1418
Alternate gene names: NA
Gene position: 1600356-1599022 (Counterclockwise)
Preceding gene: 83720254
Following gene: 83718541
Centisome position: 42.01
GC content: 69.29
Gene sequence:
>1335_bases ATGAAGCCAGAACCCACCCGCCGTTACCGGCCGCATCGCATCGTCGCGCGCTTCGTCGCGGTGTCGTGGCGCGATCTCGC GATGTCGATCGGGCCGACCGTCGTGCTCTCGGCGGCCGCGATCTGGCTCGCGATCGCGCTGATCCAGCCCGCGCCGCCGA CATCGCTGACAATCTCCGCGAGCCCGCCCGGCAGCACGAACTGGCGCGCGGCGCAGCGCTACAAGCAAATCCTCGCGAAG AACGGCGTGACGCTCGACGTGCTCGAATCCGAGGGCTCGGCCGAGAATCTCGCGCGGCTGTCGGACCCGGCGCGGAAGGT CGACGTCGGCTTCGTGCAGAGCGGCATCGAGCGGAAGGAAACGCACGAGGGTCTCGTCTCGCTCGGCAGCGTCGGCTACG TGCCGCTCGCGATCCTCTATCGCGGGCCCGTGATCGAGCGGCTGTCGCAGTTCAAGGGCAAGCGGCTCGCGCTCGGGGCC GAAGGCGCGGGCGCGCACGAGCTCGGCCTCGCGCTCCTGAAGATGAACGGCATCGCGCCGGGCGGCTCGACCGCGCTGCT GCCGCTGTCCGGCGAGGACGCCGCACGCGCGCTGACCGAAGGCCGCATCGACGCGGCGTTCCTGTCCGGCGACTCGACGC AGATCCCCGTGATGGCGAAGCTGTTCCGCGCGCCCGGCGTGCATTTCTATTCATTCACGCAAGCCGAGGCGTACACGCGG CGCTTCCCGTACCTCACCGACATCACGCTGCCGATGGGCGTGTACGATCCGGGCACGAACCTGCCGCCGTCGGACATCCA CACGCTGTCGCCGACCGTCGAGCTGATCGCGCGCGACACGCTGCATCCCGCGCTGTCGGACCTGCTCATCGAGGCCGCGC GCTACTACAAATCCGGCAAGACGTTCCTCTACCGAAAGCTGCCGTTCTGGGTGGCGAGCCTCGCCGATCGGCTGCTCTTC ATCGTCGTGCCGCTCATCGTGGTGCTGATTCCGGGGCTGCGGCTCGTGCCGGCGCTGTACGGCTGGCGCGTGCGTTCGCG AATCTACCGATGGTACGGCGCGCTCATCGCGCTCGAGCGCAGCGCGCTCGGCGAGCACACCGCGCAAGAGCGCGTCATGC TGCTCGACAGGCTCGACGACGTCGAGGAATCGGTCAACCGGATGAAAATGCCGCTCGCGTATGCCGGCCAGTTCTACGTG CTGCGCGAACACATCGGCTTCGTGCGCGAACGGCTGCTCTCGCGCGAGTACGAAACGCCCCAATCCGCCTCGCCGGCCGC GCGGAAATCCGCCGGCGCGCCGCCCGCCGATTCGCGCCCGCCCGGCGACGCTTGA
Upstream 100 bases:
>100_bases CACGCATGCGCGCCAAGTTCTCGCGCTGCGGCGCGGCGCTGCCGCGGCGACGCCGAACTCGGGTACCATCGCCGCGAACA GATCGCCCGCCTTCAGCCTC
Downstream 100 bases:
>100_bases GCCGAAAATCCGTCGCGGCGGCTGCATTTGACCGCGCCGCCGCGTAACATTCAACAAAGAGGCCGCGCGTTGCGTCCTAT TCCTCAGGAGACTCTCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TRAP-Type Transport System Periplasmic Component Protein; TRAP-Type Transport System Periplasmic Protein; Trap Transporter Solute Receptor Taxi Family Protein; TAXI Family TRAP Transporter Solute Receptor; Signal Peptide; TRAP-Type Transport System Periplasmic Component-Like; Trap Transporter Solute Receptor Taxi Family
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MKPEPTRRYRPHRIVARFVAVSWRDLAMSIGPTVVLSAAAIWLAIALIQPAPPTSLTISASPPGSTNWRAAQRYKQILAK NGVTLDVLESEGSAENLARLSDPARKVDVGFVQSGIERKETHEGLVSLGSVGYVPLAILYRGPVIERLSQFKGKRLALGA EGAGAHELGLALLKMNGIAPGGSTALLPLSGEDAARALTEGRIDAAFLSGDSTQIPVMAKLFRAPGVHFYSFTQAEAYTR RFPYLTDITLPMGVYDPGTNLPPSDIHTLSPTVELIARDTLHPALSDLLIEAARYYKSGKTFLYRKLPFWVASLADRLLF IVVPLIVVLIPGLRLVPALYGWRVRSRIYRWYGALIALERSALGEHTAQERVMLLDRLDDVEESVNRMKMPLAYAGQFYV LREHIGFVRERLLSREYETPQSASPAARKSAGAPPADSRPPGDA
Sequences:
>Translated_444_residues MKPEPTRRYRPHRIVARFVAVSWRDLAMSIGPTVVLSAAAIWLAIALIQPAPPTSLTISASPPGSTNWRAAQRYKQILAK NGVTLDVLESEGSAENLARLSDPARKVDVGFVQSGIERKETHEGLVSLGSVGYVPLAILYRGPVIERLSQFKGKRLALGA EGAGAHELGLALLKMNGIAPGGSTALLPLSGEDAARALTEGRIDAAFLSGDSTQIPVMAKLFRAPGVHFYSFTQAEAYTR RFPYLTDITLPMGVYDPGTNLPPSDIHTLSPTVELIARDTLHPALSDLLIEAARYYKSGKTFLYRKLPFWVASLADRLLF IVVPLIVVLIPGLRLVPALYGWRVRSRIYRWYGALIALERSALGEHTAQERVMLLDRLDDVEESVNRMKMPLAYAGQFYV LREHIGFVRERLLSREYETPQSASPAARKSAGAPPADSRPPGDA >Mature_444_residues MKPEPTRRYRPHRIVARFVAVSWRDLAMSIGPTVVLSAAAIWLAIALIQPAPPTSLTISASPPGSTNWRAAQRYKQILAK NGVTLDVLESEGSAENLARLSDPARKVDVGFVQSGIERKETHEGLVSLGSVGYVPLAILYRGPVIERLSQFKGKRLALGA EGAGAHELGLALLKMNGIAPGGSTALLPLSGEDAARALTEGRIDAAFLSGDSTQIPVMAKLFRAPGVHFYSFTQAEAYTR RFPYLTDITLPMGVYDPGTNLPPSDIHTLSPTVELIARDTLHPALSDLLIEAARYYKSGKTFLYRKLPFWVASLADRLLF IVVPLIVVLIPGLRLVPALYGWRVRSRIYRWYGALIALERSALGEHTAQERVMLLDRLDDVEESVNRMKMPLAYAGQFYV LREHIGFVRERLLSREYETPQSASPAARKSAGAPPADSRPPGDA
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48611; Mature: 48611
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPEPTRRYRPHRIVARFVAVSWRDLAMSIGPTVVLSAAAIWLAIALIQPAPPTSLTISA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC SPPGSTNWRAAQRYKQILAKNGVTLDVLESEGSAENLARLSDPARKVDVGFVQSGIERKE CCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH THEGLVSLGSVGYVPLAILYRGPVIERLSQFKGKRLALGAEGAGAHELGLALLKMNGIAP HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCC GGSTALLPLSGEDAARALTEGRIDAAFLSGDSTQIPVMAKLFRAPGVHFYSFTQAEAYTR CCCEEEEEECCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHH RFPYLTDITLPMGVYDPGTNLPPSDIHTLSPTVELIARDTLHPALSDLLIEAARYYKSGK HCCCEEEECCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TFLYRKLPFWVASLADRLLFIVVPLIVVLIPGLRLVPALYGWRVRSRIYRWYGALIALER EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALGEHTAQERVMLLDRLDDVEESVNRMKMPLAYAGQFYVLREHIGFVRERLLSREYETP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCC QSASPAARKSAGAPPADSRPPGDA CCCCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKPEPTRRYRPHRIVARFVAVSWRDLAMSIGPTVVLSAAAIWLAIALIQPAPPTSLTISA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC SPPGSTNWRAAQRYKQILAKNGVTLDVLESEGSAENLARLSDPARKVDVGFVQSGIERKE CCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH THEGLVSLGSVGYVPLAILYRGPVIERLSQFKGKRLALGAEGAGAHELGLALLKMNGIAP HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCC GGSTALLPLSGEDAARALTEGRIDAAFLSGDSTQIPVMAKLFRAPGVHFYSFTQAEAYTR CCCEEEEEECCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHH RFPYLTDITLPMGVYDPGTNLPPSDIHTLSPTVELIARDTLHPALSDLLIEAARYYKSGK HCCCEEEECCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TFLYRKLPFWVASLADRLLFIVVPLIVVLIPGLRLVPALYGWRVRSRIYRWYGALIALER EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALGEHTAQERVMLLDRLDDVEESVNRMKMPLAYAGQFYVLREHIGFVRERLLSREYETP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCC QSASPAARKSAGAPPADSRPPGDA CCCCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA