| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720518
Identifier: 83720518
GI number: 83720518
Start: 3156665
End: 3158251
Strand: Direct
Name: 83720518
Synonym: BTH_I2746
Alternate gene names: NA
Gene position: 3156665-3158251 (Clockwise)
Preceding gene: 83719505
Following gene: 83721434
Centisome position: 82.87
GC content: 57.09
Gene sequence:
>1587_bases GTGATTCGGCGGGCACGAAAAAATCGAGCGGAAAATAGCGACGGCACGGAACGTGCCGCGGCCTATGTGCGCATGTCCAC TGAACACCAGCAGTATTCGACTGAAAACCAACGGGACGTAATCTTCGCGTTCGCCGCTGCACGGAATCTTGAAATCGTCA AAATTTACGCCGATGAAGGGAAAAGTGGGCTGCGACTCGAAGGCCGTGATCAGTTGAAAGCATTACTGCGTGATGTGGAA TCAGGGCAGGCAGACTATTCCGTCGTCCTCGTGTACGACGTGAGCCGATGGGGCCGATTCCAGGATCCCGACGAGAGCGC GAGCTATGAAATTCGCTGCAAGCAGGCCGGCGTCCGAGTGTTGTACTGTGCAGAGCAGTTCGAGAATGACGGCAGCGCCG TATCCAGCATCATCAAAAATGTGAAGCGCACGATGGCCGGTGAGTACAGCCGCGAACTGAGCGTTAAGGTGCATGCCGGC CAAATGCGACTCATTCAGCTTGGCGTGAGGCAAGGTGGTCCGGCCGGCTATGGTCTGCGCCGCATGCTGATCGACCATAC CGGTGCTCGGAAGGCTGAACTGAAACCTGGCGAGCACAAGTCAATCCAGACCGACCGCGTGATCCTGGTACCCGGCCCGG TCGAAGAAACTGATACTGTGCGCTGGATATACAAGGCATTCGTGGAAGATGGGCTGACCGAATCAGAAATCGCGGCCTTG CTCAATCGCGAGGGCAGACTCACGGATCGTGGAACCGCTTGGACACGTGGCACGGTTCACCAGATTCTGATCAATGACAA ATACGTCGGTGACAATGTCTGGAATCGCACGTCCTTCAAGCTCAAGGAAGAACGGGTCAGAAATCCACCGGCTGCCTGGG CACGAGCAGCAGACGCATTCGATCCCATTGTCGACCGGCTGATCTTCAATGCTGCGCGCCAGATTATCCTCGCACGCTCT TACCGGCTCACCGACGAAGAAATGCTGGCTGCGTTACGCCGGGTACTGTTGCGACACGGCTACCTATCCGGCATTGTGAT CGACGAGACAACGGACTGCCCTTCGAGCAGCGCGTTCGCCGGTCGTTTCGGCAGCCTGATCCGTACATATACCTTAATTG GCTATACCCCGGATCGGGACTACCGTTACCTCGAAATTAACCGCCGTCTGCGCGAACTGCATCCGAGCATCGTTTCGGAT GCAATGAACGCCATGACAGCCGCTGGAGCGCGAATAGATCGGAACTCGACAACCGATCTGCTGCGGGTCAACGGTGAATT CACAGTTTCGCTTGCCCTGTGCCGATGTCGCACGACCAATGCTGGCACCAATCGCTGGCTTGTACGGTTCGATACCGCGC TGAAGCCCGACATCACGATCGCCGTACGTATGGCCCCCGACGCGCAGTCGATCCGAGACTACTACCTGCTTCCAGCCATC GACGTCTGGTCAGAACAGCTGCGCCTCGGCGACTACAACGAACAGGGCTTCGACGCTTACCGCTACGACGACCTATCGAT GCTCGTCTATCTCGGCCGCCGAGTGCCGCTACGTGGAGGCAGTCATGAATGGCAACCAAGATTCTAA
Upstream 100 bases:
>100_bases ATTTCCGATCTCCGAAAGTATATTGGCTGTGATCGCAATGTGACTACGACGAAATAGCAGAAATTAAACGGCTGCGACTT CCATTTCGGTGGGGAATACG
Downstream 100 bases:
>100_bases ACCTGGGCCGCCTTCGTCGTCGGAGAAGATATTGCTAATTCCGGCTGACCGGCTGCGCGTACTCAATCCGCGCACACGCA ATCCCCTATTTTTTTCGCAA
Product: recombinase
Products: NA
Alternate protein names: Resolvase Domain-Containing Protein; Resolvase Domain; Resolvase Domain Protein; Site-Specific Recombinase; Resolvase Family Site-Specific Recombinase; Resolvase; Recombinase-Like Protein; Recombinase Protein; Site-Specific Recombinase Resolvase Family; LOW QUALITY PROTEIN Resolvase Domain Protein; DNA Integration/Recombination Protein; DNA Recombinase
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MIRRARKNRAENSDGTERAAAYVRMSTEHQQYSTENQRDVIFAFAAARNLEIVKIYADEGKSGLRLEGRDQLKALLRDVE SGQADYSVVLVYDVSRWGRFQDPDESASYEIRCKQAGVRVLYCAEQFENDGSAVSSIIKNVKRTMAGEYSRELSVKVHAG QMRLIQLGVRQGGPAGYGLRRMLIDHTGARKAELKPGEHKSIQTDRVILVPGPVEETDTVRWIYKAFVEDGLTESEIAAL LNREGRLTDRGTAWTRGTVHQILINDKYVGDNVWNRTSFKLKEERVRNPPAAWARAADAFDPIVDRLIFNAARQIILARS YRLTDEEMLAALRRVLLRHGYLSGIVIDETTDCPSSSAFAGRFGSLIRTYTLIGYTPDRDYRYLEINRRLRELHPSIVSD AMNAMTAAGARIDRNSTTDLLRVNGEFTVSLALCRCRTTNAGTNRWLVRFDTALKPDITIAVRMAPDAQSIRDYYLLPAI DVWSEQLRLGDYNEQGFDAYRYDDLSMLVYLGRRVPLRGGSHEWQPRF
Sequences:
>Translated_528_residues MIRRARKNRAENSDGTERAAAYVRMSTEHQQYSTENQRDVIFAFAAARNLEIVKIYADEGKSGLRLEGRDQLKALLRDVE SGQADYSVVLVYDVSRWGRFQDPDESASYEIRCKQAGVRVLYCAEQFENDGSAVSSIIKNVKRTMAGEYSRELSVKVHAG QMRLIQLGVRQGGPAGYGLRRMLIDHTGARKAELKPGEHKSIQTDRVILVPGPVEETDTVRWIYKAFVEDGLTESEIAAL LNREGRLTDRGTAWTRGTVHQILINDKYVGDNVWNRTSFKLKEERVRNPPAAWARAADAFDPIVDRLIFNAARQIILARS YRLTDEEMLAALRRVLLRHGYLSGIVIDETTDCPSSSAFAGRFGSLIRTYTLIGYTPDRDYRYLEINRRLRELHPSIVSD AMNAMTAAGARIDRNSTTDLLRVNGEFTVSLALCRCRTTNAGTNRWLVRFDTALKPDITIAVRMAPDAQSIRDYYLLPAI DVWSEQLRLGDYNEQGFDAYRYDDLSMLVYLGRRVPLRGGSHEWQPRF >Mature_528_residues MIRRARKNRAENSDGTERAAAYVRMSTEHQQYSTENQRDVIFAFAAARNLEIVKIYADEGKSGLRLEGRDQLKALLRDVE SGQADYSVVLVYDVSRWGRFQDPDESASYEIRCKQAGVRVLYCAEQFENDGSAVSSIIKNVKRTMAGEYSRELSVKVHAG QMRLIQLGVRQGGPAGYGLRRMLIDHTGARKAELKPGEHKSIQTDRVILVPGPVEETDTVRWIYKAFVEDGLTESEIAAL LNREGRLTDRGTAWTRGTVHQILINDKYVGDNVWNRTSFKLKEERVRNPPAAWARAADAFDPIVDRLIFNAARQIILARS YRLTDEEMLAALRRVLLRHGYLSGIVIDETTDCPSSSAFAGRFGSLIRTYTLIGYTPDRDYRYLEINRRLRELHPSIVSD AMNAMTAAGARIDRNSTTDLLRVNGEFTVSLALCRCRTTNAGTNRWLVRFDTALKPDITIAVRMAPDAQSIRDYYLLPAI DVWSEQLRLGDYNEQGFDAYRYDDLSMLVYLGRRVPLRGGSHEWQPRF
Specific function: Unknown
COG id: COG1961
COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59979; Mature: 59979
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRARKNRAENSDGTERAAAYVRMSTEHQQYSTENQRDVIFAFAAARNLEIVKIYADEG CCCCCHHCCCCCCCCHHHHHEEEEECCCHHHHCCCCCCEEEEEEEECCCEEEEEEEECCC KSGLRLEGRDQLKALLRDVESGQADYSVVLVYDVSRWGRFQDPDESASYEIRCKQAGVRV CCCCEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEE LYCAEQFENDGSAVSSIIKNVKRTMAGEYSRELSVKVHAGQMRLIQLGVRQGGPAGYGLR EEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCCCCHHHH RMLIDHTGARKAELKPGEHKSIQTDRVILVPGPVEETDTVRWIYKAFVEDGLTESEIAAL HHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHH LNREGRLTDRGTAWTRGTVHQILINDKYVGDNVWNRTSFKLKEERVRNPPAAWARAADAF HCCCCCCCCCCCCCCCCCEEEEEEECEECCCCCCCCCCCEEHHHHCCCCCHHHHHHHHHH DPIVDRLIFNAARQIILARSYRLTDEEMLAALRRVLLRHGYLSGIVIDETTDCPSSSAFA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHH GRFGSLIRTYTLIGYTPDRDYRYLEINRRLRELHPSIVSDAMNAMTAAGARIDRNSTTDL HHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCE LRVNGEFTVSLALCRCRTTNAGTNRWLVRFDTALKPDITIAVRMAPDAQSIRDYYLLPAI EEECCCEEEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHEEECCCH DVWSEQLRLGDYNEQGFDAYRYDDLSMLVYLGRRVPLRGGSHEWQPRF HHHHHHHHCCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIRRARKNRAENSDGTERAAAYVRMSTEHQQYSTENQRDVIFAFAAARNLEIVKIYADEG CCCCCHHCCCCCCCCHHHHHEEEEECCCHHHHCCCCCCEEEEEEEECCCEEEEEEEECCC KSGLRLEGRDQLKALLRDVESGQADYSVVLVYDVSRWGRFQDPDESASYEIRCKQAGVRV CCCCEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEE LYCAEQFENDGSAVSSIIKNVKRTMAGEYSRELSVKVHAGQMRLIQLGVRQGGPAGYGLR EEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCCCCHHHH RMLIDHTGARKAELKPGEHKSIQTDRVILVPGPVEETDTVRWIYKAFVEDGLTESEIAAL HHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHH LNREGRLTDRGTAWTRGTVHQILINDKYVGDNVWNRTSFKLKEERVRNPPAAWARAADAF HCCCCCCCCCCCCCCCCCEEEEEEECEECCCCCCCCCCCEEHHHHCCCCCHHHHHHHHHH DPIVDRLIFNAARQIILARSYRLTDEEMLAALRRVLLRHGYLSGIVIDETTDCPSSSAFA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHH GRFGSLIRTYTLIGYTPDRDYRYLEINRRLRELHPSIVSDAMNAMTAAGARIDRNSTTDL HHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCE LRVNGEFTVSLALCRCRTTNAGTNRWLVRFDTALKPDITIAVRMAPDAQSIRDYYLLPAI EEECCCEEEEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHEEECCCH DVWSEQLRLGDYNEQGFDAYRYDDLSMLVYLGRRVPLRGGSHEWQPRF HHHHHHHHCCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA