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The map label for this gene is lipA [H]

Identifier: 83720495

GI number: 83720495

Start: 427153

End: 428142

Strand: Direct

Name: lipA [H]

Synonym: BTH_I0386

Alternate gene names: 83720495

Gene position: 427153-428142 (Clockwise)

Preceding gene: 83719023

Following gene: 83721094

Centisome position: 11.21

GC content: 66.06

Gene sequence:

>990_bases
ATGACTGACCTTACCGCTACCCCCGCACCCGCCGAACCGGCCGCGTCCGCCTACGATCCGACCGCCAAGCAGAAGGCGCA
GGCGAAGACCGCGCGCATTCCGATCAAGATCGTCCCGATCGAGAAGCTGAAGAAGCCCGAATGGATTCGCGTGAAGGCGG
CCACCGGCAGCTCGCGCTTCAACGAGATCAAGACGATCCTGCGCGAGCACAATCTGCACACGGTGTGCGAGGAGGCGAGC
TGTCCGAACATCGGCGAGTGCTTCGGCAAGGGCACCGCGACGTTCATGATCATGGGCGACAAGTGCACGCGCCGCTGCCC
GTTCTGCGACGTCGGCCACGGCCGTCCCGATCCGCTCGACGCCGACGAGCCGAAGAACCTCGCGCGCACGATCGCGGCGC
TCAAGCTCAAGTACGTGGTGATCACGAGCGTCGACCGCGACGACTTGCGCGACGGCGGCGCCGGACACTTCGTCGAGTGC
ATCCGCGAAGTGCGCGAGCAGTCGCCGGCGACGCGCATCGAGATCCTGACGCCGGACTTCCGCGGCCGCCTCGACCGCGC
GCTCGAGATCCTGAACGCCGCGCCGCCCGACGTGATGAACCACAACCTCGAAACGGTGCCGCGCCTGTACAAGGAGGCGC
GCCCCGGCTCGGACTACGCGCATTCGCTGAAGCTGCTGAAGGACTTCAAGGCGCTGCATCCGGACGTCGCGACGAAGTCG
GGCCTGATGGTCGGCCTCGGCGAGACGACCGACGAAATCCTGCAGGTGATGCGCGACCTGCGCGCGCACGATGTCGACAT
GCTGACGATCGGCCAATACCTGCAGCCGTCCGAGCACCATTTGCCGGTGCGCGAATACGTGCATCCGGATACGTTCAAGA
TGTACGAGGAAGAGGCGTACAAGATGGGCTTCACGCACGCGGCCGTCGGCGCGATGGTGCGTTCGAGCTATCACGCCGAT
CTGCAGGCGCACGGCGCCGGGGTGGTCTGA

Upstream 100 bases:

>100_bases
TGGCACGAAGTCGCGCGGACGCTCGTGCGCCGTCTGATCGCCAACCTCGACGGCGCAACCGCGGCCGCCGCATTGCCGCA
GCAGGCACTGGAACAATCGA

Downstream 100 bases:

>100_bases
TCCGATCCGGGCCGCCGGGCCGCCGGATCGGGCGGCCCGGGCGTCGAACGAGAAACCCGCAGCGGACGCCGCGGGTTTTT
TTATGCGCGCGCCGCGCGCG

Product: lipoyl synthase

Products: NA

Alternate protein names: Lip-syn; LS; Lipoate synthase; Lipoic acid synthase; Sulfur insertion protein lipA [H]

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTDLTATPAPAEPAASAYDPTAKQKAQAKTARIPIKIVPIEKLKKPEWIRVKAATGSSRFNEIKTILREHNLHTVCEEAS
CPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDADEPKNLARTIAALKLKYVVITSVDRDDLRDGGAGHFVEC
IREVREQSPATRIEILTPDFRGRLDRALEILNAAPPDVMNHNLETVPRLYKEARPGSDYAHSLKLLKDFKALHPDVATKS
GLMVGLGETTDEILQVMRDLRAHDVDMLTIGQYLQPSEHHLPVREYVHPDTFKMYEEEAYKMGFTHAAVGAMVRSSYHAD
LQAHGAGVV

Sequences:

>Translated_329_residues
MTDLTATPAPAEPAASAYDPTAKQKAQAKTARIPIKIVPIEKLKKPEWIRVKAATGSSRFNEIKTILREHNLHTVCEEAS
CPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDADEPKNLARTIAALKLKYVVITSVDRDDLRDGGAGHFVEC
IREVREQSPATRIEILTPDFRGRLDRALEILNAAPPDVMNHNLETVPRLYKEARPGSDYAHSLKLLKDFKALHPDVATKS
GLMVGLGETTDEILQVMRDLRAHDVDMLTIGQYLQPSEHHLPVREYVHPDTFKMYEEEAYKMGFTHAAVGAMVRSSYHAD
LQAHGAGVV
>Mature_328_residues
TDLTATPAPAEPAASAYDPTAKQKAQAKTARIPIKIVPIEKLKKPEWIRVKAATGSSRFNEIKTILREHNLHTVCEEASC
PNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDADEPKNLARTIAALKLKYVVITSVDRDDLRDGGAGHFVECI
REVREQSPATRIEILTPDFRGRLDRALEILNAAPPDVMNHNLETVPRLYKEARPGSDYAHSLKLLKDFKALHPDVATKSG
LMVGLGETTDEILQVMRDLRAHDVDMLTIGQYLQPSEHHLPVREYVHPDTFKMYEEEAYKMGFTHAAVGAMVRSSYHADL
QAHGAGVV

Specific function: Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives [H]

COG id: COG0320

COG function: function code H; Lipoate synthase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. Lipoyl synthase family [H]

Homologues:

Organism=Homo sapiens, GI37577166, Length=286, Percent_Identity=48.6013986013986, Blast_Score=279, Evalue=3e-75,
Organism=Homo sapiens, GI37577164, Length=250, Percent_Identity=49.2, Blast_Score=243, Evalue=2e-64,
Organism=Escherichia coli, GI1786846, Length=309, Percent_Identity=64.0776699029126, Blast_Score=418, Evalue=1e-118,
Organism=Caenorhabditis elegans, GI32564533, Length=254, Percent_Identity=46.8503937007874, Blast_Score=232, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6324770, Length=289, Percent_Identity=44.9826989619377, Blast_Score=250, Evalue=2e-67,
Organism=Drosophila melanogaster, GI221513272, Length=286, Percent_Identity=46.8531468531469, Blast_Score=261, Evalue=4e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR003698
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: =2.8.1.8 [H]

Molecular weight: Translated: 36487; Mature: 36356

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLTATPAPAEPAASAYDPTAKQKAQAKTARIPIKIVPIEKLKKPEWIRVKAATGSSRF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECHHHHCCCCEEEEEECCCCHHH
NEIKTILREHNLHTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLD
HHHHHHHHHCCHHHHHHCCCCCCHHHHHCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCC
ADEPKNLARTIAALKLKYVVITSVDRDDLRDGGAGHFVECIREVREQSPATRIEILTPDF
CCCHHHHHHHHHHHHHEEEEEEECCHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCHH
RGRLDRALEILNAAPPDVMNHNLETVPRLYKEARPGSDYAHSLKLLKDFKALHPDVATKS
HHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
GLMVGLGETTDEILQVMRDLRAHDVDMLTIGQYLQPSEHHLPVREYVHPDTFKMYEEEAY
CEEEECCCCHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHH
KMGFTHAAVGAMVRSSYHADLQAHGAGVV
HHCCHHHHHHHHHHHHHHCCHHCCCCCCC
>Mature Secondary Structure 
TDLTATPAPAEPAASAYDPTAKQKAQAKTARIPIKIVPIEKLKKPEWIRVKAATGSSRF
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECHHHHCCCCEEEEEECCCCHHH
NEIKTILREHNLHTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLD
HHHHHHHHHCCHHHHHHCCCCCCHHHHHCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCC
ADEPKNLARTIAALKLKYVVITSVDRDDLRDGGAGHFVECIREVREQSPATRIEILTPDF
CCCHHHHHHHHHHHHHEEEEEEECCHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCHH
RGRLDRALEILNAAPPDVMNHNLETVPRLYKEARPGSDYAHSLKLLKDFKALHPDVATKS
HHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
GLMVGLGETTDEILQVMRDLRAHDVDMLTIGQYLQPSEHHLPVREYVHPDTFKMYEEEAY
CEEEECCCCHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHH
KMGFTHAAVGAMVRSSYHADLQAHGAGVV
HHCCHHHHHHHHHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA