Click here to switch to the map view.

The map label for this gene is ycdI [C]

Identifier: 83720462

GI number: 83720462

Start: 3376518

End: 3377123

Strand: Reverse

Name: ycdI [C]

Synonym: BTH_I2938

Alternate gene names: 83720462

Gene position: 3377123-3376518 (Counterclockwise)

Preceding gene: 83718673

Following gene: 83721016

Centisome position: 88.66

GC content: 68.98

Gene sequence:

>606_bases
ATGTCCGTCAAACCCGCTCCCACTTCCGTTTCGATTCACGAACTGATCGCCGGCCGCTGGAGTCCGCGCGCGTATTCGAG
CGAGCCCGTCAGCGCCGAGCATCTGCATGCCGTGCTCGAAGCGGCGCGCTGGGCGCCGTCCGCGTACAACGCGCAGCCGT
GGCGCTTCATCGTATTCGACCGCAGCAAGGACGAAGTCGCGTTCAAGCGCGCCTTCTCGACCCTCGTGCCGTTCAATCAG
GGCTGGAACGCGCCCGCGCCCGTGCTGATCGCGGTGACCGCGCACACGCTCACGTCGAAGGGCGAGCCGAGTCCGACGGC
GCTCTACGACGCCGGTGCGGCCGCGATGTCGCTCGTGCTGCAGGCGCACGCGCTCGGTCTCGCGGCGCACCAGATGAGCG
GTTTCGACGTGAAGGCGTTCCGCGACGCGTTCGCGATTCCCGCCGACGTCGAGCCGCTCGCGATCATCTCGATCGGCCAC
TACGGCGATGCCGACAAGCTCGATCCGGTGCTGCGCGAGCGCGAACGCGCGCCGCGCACGCGCCACGCGATCGGCGAGGT
CGTCTACGCGGACGCGTGGCACAAGCCGTTCTCGTCGGCGGCTTGA

Upstream 100 bases:

>100_bases
GCATTTGCGCGCACGGTTCGGCAAGCTCATCGACAAGCGGTTATGCTGGCGTTTCTTTTCCGGGCGACCGAGCCCTTTTT
AAAAATTGGTGAGGAAACGC

Downstream 100 bases:

>100_bases
CGTAACGAAACGCACGGCCGGCGCGCGCCTCACGGTGAAGCCGCCGCCGGCCGGCGCGGCAATATGGGCGCGCGCCCGTC
GTTCCCCTGCGCCGGCCGCC

Product: nitroreductase family protein

Products: NA

Alternate protein names: ORFX [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFDRSKDEVAFKRAFSTLVPFNQ
GWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVLQAHALGLAAHQMSGFDVKAFRDAFAIPADVEPLAIISIGH
YGDADKLDPVLRERERAPRTRHAIGEVVYADAWHKPFSSAA

Sequences:

>Translated_201_residues
MSVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFDRSKDEVAFKRAFSTLVPFNQ
GWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVLQAHALGLAAHQMSGFDVKAFRDAFAIPADVEPLAIISIGH
YGDADKLDPVLRERERAPRTRHAIGEVVYADAWHKPFSSAA
>Mature_200_residues
SVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFDRSKDEVAFKRAFSTLVPFNQG
WNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVLQAHALGLAAHQMSGFDVKAFRDAFAIPADVEPLAIISIGHY
GDADKLDPVLRERERAPRTRHAIGEVVYADAWHKPFSSAA

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 21761; Mature: 21630

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFD
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
RSKDEVAFKRAFSTLVPFNQGWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVL
CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHH
QAHALGLAAHQMSGFDVKAFRDAFAIPADVEPLAIISIGHYGDADKLDPVLRERERAPRT
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHH
RHAIGEVVYADAWHKPFSSAA
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFD
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
RSKDEVAFKRAFSTLVPFNQGWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVL
CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHH
QAHALGLAAHQMSGFDVKAFRDAFAIPADVEPLAIISIGHYGDADKLDPVLRERERAPRT
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHH
RHAIGEVVYADAWHKPFSSAA
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7910936 [H]