| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720453
Identifier: 83720453
GI number: 83720453
Start: 2903007
End: 2903507
Strand: Reverse
Name: 83720453
Synonym: BTH_I2545
Alternate gene names: NA
Gene position: 2903507-2903007 (Counterclockwise)
Preceding gene: 83721334
Following gene: 83719116
Centisome position: 76.22
GC content: 63.87
Gene sequence:
>501_bases ATGATTCATCTATTCAGTATTGGATTCTTTTTCGCCTGGGCTGCGGCTGTTGCAATTGCTGATTGTCGCGATCGCCGTAT TCCCAACGAATTGGTGCTCGCCGGTCTCGCCGCCGTTATCATTTTTACAGTCTGCCGACAAAATCCATTCGAAACGACAT TGGTCGGCGCATTGATCGGCGGCGCAGTTGGTCTCGTTTCCCTTTTCCCGTTTTTCGCGCTGCGCTTGATGGGCGCCGCC GACGTGAAGGTATTCGCGGTGCTCGGCGCGTGGTGCGGGCTGCCGGCGTTGCCGCGGCTATGGATCGTCGCGAGCGTCGC GGCGGGTATCCACGCGCTCGGGCTGCTGCTCCTGACACGCACGCCGCTCGGCTCGCTCGGGCGCAACGGCGCGCCCGCGT TCGCGCTCGGCGCGCGCCGCTCCGCGCCTTATGCGGCGTTTCTCGTCGCGCCCGCCGCCGCGTGGCTCGCCTATCTGATT CAGACCGGAGGCACGCGATGA
Upstream 100 bases:
>100_bases CAAATTGCCGGCGGCCTGACTTTCACATCCAATTACGCATGACCACGAATTGCGGATTGCCTCGGCAGTCCGCAAGCGTC GCTGGGCGGCTGGGGCTGAA
Downstream 100 bases:
>100_bases CGCACGCGCCCGGACGGTTCCGCTCGCCGCGCCGCCAGCGCGGCGCGACCGCGATCGAATTCGCGATCCTGTTTCCGATG TTCTTCCTGATCCTGTACGG
Product: peptidase
Products: NA
Alternate protein names: Prepilin Peptidase Transmembrane Protein CpaA Like; Type II Secretory Pathway Prepilin Signal Peptidase PulO
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MIHLFSIGFFFAWAAAVAIADCRDRRIPNELVLAGLAAVIIFTVCRQNPFETTLVGALIGGAVGLVSLFPFFALRLMGAA DVKVFAVLGAWCGLPALPRLWIVASVAAGIHALGLLLLTRTPLGSLGRNGAPAFALGARRSAPYAAFLVAPAAAWLAYLI QTGGTR
Sequences:
>Translated_166_residues MIHLFSIGFFFAWAAAVAIADCRDRRIPNELVLAGLAAVIIFTVCRQNPFETTLVGALIGGAVGLVSLFPFFALRLMGAA DVKVFAVLGAWCGLPALPRLWIVASVAAGIHALGLLLLTRTPLGSLGRNGAPAFALGARRSAPYAAFLVAPAAAWLAYLI QTGGTR >Mature_166_residues MIHLFSIGFFFAWAAAVAIADCRDRRIPNELVLAGLAAVIIFTVCRQNPFETTLVGALIGGAVGLVSLFPFFALRLMGAA DVKVFAVLGAWCGLPALPRLWIVASVAAGIHALGLLLLTRTPLGSLGRNGAPAFALGARRSAPYAAFLVAPAAAWLAYLI QTGGTR
Specific function: Unknown
COG id: COG4960
COG function: function code OU; Flp pilus assembly protein, protease CpaA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17332; Mature: 17332
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHLFSIGFFFAWAAAVAIADCRDRRIPNELVLAGLAAVIIFTVCRQNPFETTLVGALIG CEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GAVGLVSLFPFFALRLMGAADVKVFAVLGAWCGLPALPRLWIVASVAAGIHALGLLLLTR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC TPLGSLGRNGAPAFALGARRSAPYAAFLVAPAAAWLAYLIQTGGTR CCCHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIHLFSIGFFFAWAAAVAIADCRDRRIPNELVLAGLAAVIIFTVCRQNPFETTLVGALIG CEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GAVGLVSLFPFFALRLMGAADVKVFAVLGAWCGLPALPRLWIVASVAAGIHALGLLLLTR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC TPLGSLGRNGAPAFALGARRSAPYAAFLVAPAAAWLAYLIQTGGTR CCCHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA