| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is phbC [H]
Identifier: 83720440
GI number: 83720440
Start: 2536388
End: 2538358
Strand: Direct
Name: phbC [H]
Synonym: BTH_I2255
Alternate gene names: 83720440
Gene position: 2536388-2538358 (Clockwise)
Preceding gene: 83721548
Following gene: 83719964
Centisome position: 66.59
GC content: 66.06
Gene sequence:
>1971_bases GTGGGTGGTCGACTTCATGCGGCTCGAGCAGGATTTCCAGGGTCCCCGCAGGCAACACCGAGGAAACACCGAGGAACCAC CGTTAAGGCAGGTATGACAGCATCGAAAAAATCGTCGACGTCCTCTCACACGGATACTTCCCAGGGTCGCAACGCAGCCG GATCGGCGGCCCAGCCCATGCAACAGTTGTTCGAGTCCTGGCTCGACGCGTGGCGCAGCTTCGCGGACCCGGCCCGGGCG AGCGCTGGCGGCGCGCCCGCGCAGCCGCCGTTCGCGGCGTTCCAGGCGCCTCAACTGTTCCCGTTCGCGATGCCTAAGAT GCCGCCGATGCCGGACTGGTCCGGCGGCGCGCCCGCGTCGCTCGCGCCCGTCGCGTCGGTGCCGCCCGCGCGGCTGCAGA AGCTGCAGGCCGATTACGCGCGCGATTGCCTCGCGCTGATCCAGCAGGCAAGCGCCGCGGCGCCGACCGTTCCCGAGCTG AAGGATCGGCGTTTCAGCTCGGATGCATGGAAGGCTTCGCCCGCGCACGGATTCGCGGCCGCGTGGTATCTGCTGAACGC GCGCTATCTGCAGGAGCTTGCCGACGCGCTCGAGACCGATCCGAAGACGCGCGAGCGGATCCGCTTCACGGTCCAGCAGT GGACGGCCGCCGCGTCGCCGAGCAACTTTCTCGCGCTCAATCCTGAGGCGCAGAAGAATCTCGTCGAGACGCAGGGCGAG AGCCTGCGTCTCGGGATGATGAACCTGCTCGCGGACATGCGGCGCGGCAAGATCACGCAGACGGACGAATCGCAATTCGT CGTCGGCAAGAATCTCGCGGTGACACCGGGCGCGATCGTCTACGAGAACGATCTGATCCAGCTGATCCAGTACAAGCCGA CGACGGCAACCGTCTTCGAGCGGCCGCTCCTCATCGTGCCGCCTTGCATCAACAAGTTCTACATCCTCGATCTGCAGCCG GAGAACTCGCTCGTCGCGCACGCGCTGTCGTGCGGCCATCAGGTGTTTCTCGTGTCGTGGCGCAACGCCGATGCGTTGGT CTCGCACAAGACGTGGGACGACTACATCGACGAGGGGCTGCTCGCCGCGATCGACGTCGTCCAGCAGGTGAGCGGGCGCG AGCAGATCAACACGCTCGGTTTTTGCGTCGGCGGCACGATGCTGGCCACGGCGCTCGCGGTGCTCGCCGCGCGCGGCGAG CATCCGGCCGCGTCGATGACGCTCCTCACCGCGATGCTCGATTTTTCCGACACGGGCATCCTCGACGTGTTCGTCGACGA AGCGCACGTGCAGATGCGCGAGCAGACCATCGGCGGCAAGAACGGCGCGCCCGCGGGCTTGATGCGCGGCGTCGAGTTCG CGAACACGTTTTCGTTTCTGCGTCCGAACGATCTCGTGTGGAACTACGTCGTCGACAACTACCTGAAGGGCCGCACGCCG GCGCCGTTCGATCTGCTGTACTGGAACGGCGATTCGACGAGCCTGCCGGGGCCGATGTACGCGTGGTATCTGCGAAACAC CTATCTCGAGAACAAGCTGCGCGAGCCGGATGCGCTCACCGTGTGCGGCGAGCCCGTCGATCTGTCGCGGATCGACGTGC CGACGTTCATCTACGGCTCGCGCGAGGATCACATCGTGCCGTGGCAGACCGCGTACGAATCGACGTCGCTGCTGACGGGG CCGCTGAAGTTCGTGCTCGGCGCATCGGGCCACATCGCGGGCGTGATCAACCCGCCTGCGAAGCACAAGCGCAGCTACTG GAGCTATGACGCCGATGCGAAGGCGCTGCCGGAATCGGCGAACGACTGGCTCGACGCGGCCGTCGAGCATCCGGGCAGCT GGTGGCCGGTGTGGATCGAGTGGCTCGATCAGTACGGCGGAAAGAAGGTGAAGCCGCGCGGGCAGCTCGGCTCCGCGCAC TTCCCGGTGATCGAGCCTGCGCCCGGCCGGTATGTGATGCAACGCGATTGA
Upstream 100 bases:
>100_bases GTGACGGATCACATGGGGAAAACGATAATGATAAAACTACTGCACTGCGGCAGAATCTGGAGAAGCGCTCCGGAACACGC CCGGCTGAACGGGGCGCGCA
Downstream 100 bases:
>100_bases CGAACGACGGAAGGCGGAGCACGCTTTGCGTCGCTACCGATTTTTAACAGGGCGGTTCGCGGCGCGCCGTGCCGCGTTCG CTCGGAGGATAGTGAAATGA
Product: poly(R)-hydroxyalkanoic acid synthase, class I
Products: NA
Alternate protein names: PHA synthase; PHB synthase; Poly(3-hydroxyalkanoate) polymerase; PHA polymerase; Poly(3-hydroxybutyrate) polymerase; PHB polymerase; Polyhydroxyalkanoic acid synthase [H]
Number of amino acids: Translated: 656; Mature: 655
Protein sequence:
>656_residues MGGRLHAARAGFPGSPQATPRKHRGTTVKAGMTASKKSSTSSHTDTSQGRNAAGSAAQPMQQLFESWLDAWRSFADPARA SAGGAPAQPPFAAFQAPQLFPFAMPKMPPMPDWSGGAPASLAPVASVPPARLQKLQADYARDCLALIQQASAAAPTVPEL KDRRFSSDAWKASPAHGFAAAWYLLNARYLQELADALETDPKTRERIRFTVQQWTAAASPSNFLALNPEAQKNLVETQGE SLRLGMMNLLADMRRGKITQTDESQFVVGKNLAVTPGAIVYENDLIQLIQYKPTTATVFERPLLIVPPCINKFYILDLQP ENSLVAHALSCGHQVFLVSWRNADALVSHKTWDDYIDEGLLAAIDVVQQVSGREQINTLGFCVGGTMLATALAVLAARGE HPAASMTLLTAMLDFSDTGILDVFVDEAHVQMREQTIGGKNGAPAGLMRGVEFANTFSFLRPNDLVWNYVVDNYLKGRTP APFDLLYWNGDSTSLPGPMYAWYLRNTYLENKLREPDALTVCGEPVDLSRIDVPTFIYGSREDHIVPWQTAYESTSLLTG PLKFVLGASGHIAGVINPPAKHKRSYWSYDADAKALPESANDWLDAAVEHPGSWWPVWIEWLDQYGGKKVKPRGQLGSAH FPVIEPAPGRYVMQRD
Sequences:
>Translated_656_residues MGGRLHAARAGFPGSPQATPRKHRGTTVKAGMTASKKSSTSSHTDTSQGRNAAGSAAQPMQQLFESWLDAWRSFADPARA SAGGAPAQPPFAAFQAPQLFPFAMPKMPPMPDWSGGAPASLAPVASVPPARLQKLQADYARDCLALIQQASAAAPTVPEL KDRRFSSDAWKASPAHGFAAAWYLLNARYLQELADALETDPKTRERIRFTVQQWTAAASPSNFLALNPEAQKNLVETQGE SLRLGMMNLLADMRRGKITQTDESQFVVGKNLAVTPGAIVYENDLIQLIQYKPTTATVFERPLLIVPPCINKFYILDLQP ENSLVAHALSCGHQVFLVSWRNADALVSHKTWDDYIDEGLLAAIDVVQQVSGREQINTLGFCVGGTMLATALAVLAARGE HPAASMTLLTAMLDFSDTGILDVFVDEAHVQMREQTIGGKNGAPAGLMRGVEFANTFSFLRPNDLVWNYVVDNYLKGRTP APFDLLYWNGDSTSLPGPMYAWYLRNTYLENKLREPDALTVCGEPVDLSRIDVPTFIYGSREDHIVPWQTAYESTSLLTG PLKFVLGASGHIAGVINPPAKHKRSYWSYDADAKALPESANDWLDAAVEHPGSWWPVWIEWLDQYGGKKVKPRGQLGSAH FPVIEPAPGRYVMQRD >Mature_655_residues GGRLHAARAGFPGSPQATPRKHRGTTVKAGMTASKKSSTSSHTDTSQGRNAAGSAAQPMQQLFESWLDAWRSFADPARAS AGGAPAQPPFAAFQAPQLFPFAMPKMPPMPDWSGGAPASLAPVASVPPARLQKLQADYARDCLALIQQASAAAPTVPELK DRRFSSDAWKASPAHGFAAAWYLLNARYLQELADALETDPKTRERIRFTVQQWTAAASPSNFLALNPEAQKNLVETQGES LRLGMMNLLADMRRGKITQTDESQFVVGKNLAVTPGAIVYENDLIQLIQYKPTTATVFERPLLIVPPCINKFYILDLQPE NSLVAHALSCGHQVFLVSWRNADALVSHKTWDDYIDEGLLAAIDVVQQVSGREQINTLGFCVGGTMLATALAVLAARGEH PAASMTLLTAMLDFSDTGILDVFVDEAHVQMREQTIGGKNGAPAGLMRGVEFANTFSFLRPNDLVWNYVVDNYLKGRTPA PFDLLYWNGDSTSLPGPMYAWYLRNTYLENKLREPDALTVCGEPVDLSRIDVPTFIYGSREDHIVPWQTAYESTSLLTGP LKFVLGASGHIAGVINPPAKHKRSYWSYDADAKALPESANDWLDAAVEHPGSWWPVWIEWLDQYGGKKVKPRGQLGSAHF PVIEPAPGRYVMQRD
Specific function: Polymerizes d(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation [H]
COG id: COG3243
COG function: function code I; Poly(3-hydroxyalkanoate) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHA/PHB synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR010963 - InterPro: IPR010941 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF07167 PhaC_N [H]
EC number: NA
Molecular weight: Translated: 71771; Mature: 71640
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGRLHAARAGFPGSPQATPRKHRGTTVKAGMTASKKSSTSSHTDTSQGRNAAGSAAQPM CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH QQLFESWLDAWRSFADPARASAGGAPAQPPFAAFQAPQLFPFAMPKMPPMPDWSGGAPAS HHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC LAPVASVPPARLQKLQADYARDCLALIQQASAAAPTVPELKDRRFSSDAWKASPAHGFAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCHHHH AWYLLNARYLQELADALETDPKTRERIRFTVQQWTAAASPSNFLALNPEAQKNLVETQGE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCC SLRLGMMNLLADMRRGKITQTDESQFVVGKNLAVTPGAIVYENDLIQLIQYKPTTATVFE CEEHHHHHHHHHHHCCCCCCCCCCCEEECCCEEECCCCEEECCCHHHHHHCCCCCHHHHC RPLLIVPPCINKFYILDLQPENSLVAHALSCGHQVFLVSWRNADALVSHKTWDDYIDEGL CCCEEECCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCEEECCCHHHHHHHHH LAAIDVVQQVSGREQINTLGFCVGGTMLATALAVLAARGEHPAASMTLLTAMLDFSDTGI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCE LDVFVDEAHVQMREQTIGGKNGAPAGLMRGVEFANTFSFLRPNDLVWNYVVDNYLKGRTP EEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC APFDLLYWNGDSTSLPGPMYAWYLRNTYLENKLREPDALTVCGEPVDLSRIDVPTFIYGS CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEECC REDHIVPWQTAYESTSLLTGPLKFVLGASGHIAGVINPPAKHKRSYWSYDADAKALPESA CCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCCCHHHCCCCH NDWLDAAVEHPGSWWPVWIEWLDQYGGKKVKPRGQLGSAHFPVIEPAPGRYVMQRD HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEEEECC >Mature Secondary Structure GGRLHAARAGFPGSPQATPRKHRGTTVKAGMTASKKSSTSSHTDTSQGRNAAGSAAQPM CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH QQLFESWLDAWRSFADPARASAGGAPAQPPFAAFQAPQLFPFAMPKMPPMPDWSGGAPAS HHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC LAPVASVPPARLQKLQADYARDCLALIQQASAAAPTVPELKDRRFSSDAWKASPAHGFAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCHHHH AWYLLNARYLQELADALETDPKTRERIRFTVQQWTAAASPSNFLALNPEAQKNLVETQGE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCC SLRLGMMNLLADMRRGKITQTDESQFVVGKNLAVTPGAIVYENDLIQLIQYKPTTATVFE CEEHHHHHHHHHHHCCCCCCCCCCCEEECCCEEECCCCEEECCCHHHHHHCCCCCHHHHC RPLLIVPPCINKFYILDLQPENSLVAHALSCGHQVFLVSWRNADALVSHKTWDDYIDEGL CCCEEECCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCEEECCCHHHHHHHHH LAAIDVVQQVSGREQINTLGFCVGGTMLATALAVLAARGEHPAASMTLLTAMLDFSDTGI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCE LDVFVDEAHVQMREQTIGGKNGAPAGLMRGVEFANTFSFLRPNDLVWNYVVDNYLKGRTP EEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC APFDLLYWNGDSTSLPGPMYAWYLRNTYLENKLREPDALTVCGEPVDLSRIDVPTFIYGS CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEECC REDHIVPWQTAYESTSLLTGPLKFVLGASGHIAGVINPPAKHKRSYWSYDADAKALPESA CCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCCCHHHCCCCH NDWLDAAVEHPGSWWPVWIEWLDQYGGKKVKPRGQLGSAHFPVIEPAPGRYVMQRD HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2670936; 1987116 [H]